| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is yifE [C]
Identifier: 145299627
GI number: 145299627
Start: 2898162
End: 2898644
Strand: Direct
Name: yifE [C]
Synonym: ASA_2701
Alternate gene names: 145299627
Gene position: 2898162-2898644 (Clockwise)
Preceding gene: 145299626
Following gene: 145299628
Centisome position: 61.63
GC content: 53.0
Gene sequence:
>483_bases ATGGCTAAATCACTTTCAATGAAAATTATTTATCCATATAGTGAAAAAATTGATTTTGCACTCTGCGACGGCCTGATGAT ACTTGCCCGCAAAGGTCAAACTAACCAGAAAAAGAGCACTATGAGCTTCGAATCCGACAAGCGTTTCAACGACTTCAAAC ATTTTCCCCGTGGCCTGCGTCGCAGTGGTGAATTCACTGTTGCCGAAGCGGACAGTCTGGAAAAATACGGCACCGCCATG CTGGCGCTCTATCAGGGCAACCTGGCGCCTCGCGATGACGTAGAAAGCGCCTTTATCGAACAGGTCAAATCCGGCGCTGC CGGCAGCAATCCCCACGCCAAGGTGTGGTTCAAGTATCTGAAGGTGATAGGTCCCAAGCGCGTGCATCGTCTGTGCACAG TCGCAGGCGGCGCCAACGAGGAAACCGGCGGCGGTGGTTTTGACGGCGGCAACGGCGGCGGTAGCGACGAGTCCATCGAT TAA
Upstream 100 bases:
>100_bases ATTTTTAACCAAACTTCGTCGCCCCAGACGGCCGAACCTTGACATAACCTGACATAACTCCGCTTTTTTGCTCCTGCCCT CCCCGAATATCCACTGGATC
Downstream 100 bases:
>100_bases TGGATACCGAACTGCTTCGGACCTTTATCGAGGTCAGCAAGACCCGGCACTTTGGCCGGGCTGCTGAGAATCTCTACCTG ACCCAGTCGGCGGTGAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MAKSLSMKIIYPYSEKIDFALCDGLMILARKGQTNQKKSTMSFESDKRFNDFKHFPRGLRRSGEFTVAEADSLEKYGTAM LALYQGNLAPRDDVESAFIEQVKSGAAGSNPHAKVWFKYLKVIGPKRVHRLCTVAGGANEETGGGGFDGGNGGGSDESID
Sequences:
>Translated_160_residues MAKSLSMKIIYPYSEKIDFALCDGLMILARKGQTNQKKSTMSFESDKRFNDFKHFPRGLRRSGEFTVAEADSLEKYGTAM LALYQGNLAPRDDVESAFIEQVKSGAAGSNPHAKVWFKYLKVIGPKRVHRLCTVAGGANEETGGGGFDGGNGGGSDESID >Mature_159_residues AKSLSMKIIYPYSEKIDFALCDGLMILARKGQTNQKKSTMSFESDKRFNDFKHFPRGLRRSGEFTVAEADSLEKYGTAML ALYQGNLAPRDDVESAFIEQVKSGAAGSNPHAKVWFKYLKVIGPKRVHRLCTVAGGANEETGGGGFDGGNGGGSDESID
Specific function: Unknown
COG id: COG3085
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI2367277, Length=107, Percent_Identity=33.6448598130841, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17393; Mature: 17262
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSLSMKIIYPYSEKIDFALCDGLMILARKGQTNQKKSTMSFESDKRFNDFKHFPRGLR CCCCCEEEEEECCCCCCCHHHHCCCCEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHH RSGEFTVAEADSLEKYGTAMLALYQGNLAPRDDVESAFIEQVKSGAAGSNPHAKVWFKYL CCCCEEEECHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH KVIGPKRVHRLCTVAGGANEETGGGGFDGGNGGGSDESID HHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AKSLSMKIIYPYSEKIDFALCDGLMILARKGQTNQKKSTMSFESDKRFNDFKHFPRGLR CCCCEEEEEECCCCCCCHHHHCCCCEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHH RSGEFTVAEADSLEKYGTAMLALYQGNLAPRDDVESAFIEQVKSGAAGSNPHAKVWFKYL CCCCEEEECHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH KVIGPKRVHRLCTVAGGANEETGGGGFDGGNGGGSDESID HHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA