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The map label for this gene is yhbU [H]

Identifier: 145299548

GI number: 145299548

Start: 2797609

End: 2798604

Strand: Direct

Name: yhbU [H]

Synonym: ASA_2617

Alternate gene names: 145299548

Gene position: 2797609-2798604 (Clockwise)

Preceding gene: 145299546

Following gene: 145299549

Centisome position: 59.49

GC content: 61.75

Gene sequence:

>996_bases
ATGGAATTACTCTGTCCGGCAGGCAGCTTGCCGGCACTGAAAACAGCCGTGGATAACGGGGCCGATGCGGTTTATATCGG
CTTCAAGGATGACACCAATGCCCGCCACTTTGCCGGTCTCAACTTCACCGACAGCAAGCTGGAAAAGGCGGTGGACTACG
TGCATCAACATGGCCGCAAGCTGCACATCGCCATCAATACCTTCGCCCACCCGGGCTCCGATACCAGATGGAAACAGGCA
GTAGACAGGGGGGTTGCCCTGGGTGCAGATGCGCTGATCATCGCCGATCTCGCCGTGCTCGATTACGCCAGCCGCCATTA
TCCGGACATGGAGCTGCACGTTTCTGTGCAAGCCAGTGCCACCAACGCCGCCGCCATTCGCTTCTATCAGCAGCATTTCA
ACGTCGGCCGGGTGGTCTTGCCACGGGTACTCTCCATGCACCAGGTCCGGCAACTGGCCCGCGAGACCGATGTCGGCCTG
GAAGTGTTCGCCTTCGGCAGCCTCTGCATCATGGCGGAGGGCCGCTGCTACCTATCCTCCTACATGACAGGGGAGAGCCC
CAACACGGTCGGTGCCTGCTCACCGGCCAAGTTCGTGCGCTGGGAGGAGACACCGGCGGGCCTCGAATCCCGCCTCAACG
AGGTGCTGATCGACCGTTATGGCCCTGGTGAAAACGCCGGTTATCCGACCCTGTGCAAGGGGCGCTTCGAGGTAGATGGC
CAGACCTATCACGCACTGGAGGAGCCGACCAGCCTCAACACCCTTGGCCTCTTGCCCGAGCTGTTCCAGACCGGCATCCA
GTCAGTCAAGATTGAAGGGCGCCAGCGCAGCCCCGCCTATGTGGAGCAGGTCACCCGGGTCTGGCGTGCGGCCATCGATG
CCTATCAGGCCAATCCCGAGGCCTATCAGGTCAAGGCCGAGTGGGATGCCCAGCTCGCCCGCGTCTCCGAAGGGAGCCAG
ACTACCCTGGGTGCCTATCACCGTCAGTGGCAATAA

Upstream 100 bases:

>100_bases
GGGTAAAGCCACACAAAGCTGCCTCAGGTCAAAAAGTGGGAAGGCATCGATGAATACAATCGGGCCACTTTTGCATTTTT
CCCCTCTCGGAGCGTACCCG

Downstream 100 bases:

>100_bases
GGAGGCCCGATGCCATTTCTTCCCGAAACAACCGATTCTGCCTTCAGCCCCTTCAGTCGCCACAAGGAGCACAACTAATG
CAATTTTCTCTCGGGCCCCT

Product: protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MELLCPAGSLPALKTAVDNGADAVYIGFKDDTNARHFAGLNFTDSKLEKAVDYVHQHGRKLHIAINTFAHPGSDTRWKQA
VDRGVALGADALIIADLAVLDYASRHYPDMELHVSVQASATNAAAIRFYQQHFNVGRVVLPRVLSMHQVRQLARETDVGL
EVFAFGSLCIMAEGRCYLSSYMTGESPNTVGACSPAKFVRWEETPAGLESRLNEVLIDRYGPGENAGYPTLCKGRFEVDG
QTYHALEEPTSLNTLGLLPELFQTGIQSVKIEGRQRSPAYVEQVTRVWRAAIDAYQANPEAYQVKAEWDAQLARVSEGSQ
TTLGAYHRQWQ

Sequences:

>Translated_331_residues
MELLCPAGSLPALKTAVDNGADAVYIGFKDDTNARHFAGLNFTDSKLEKAVDYVHQHGRKLHIAINTFAHPGSDTRWKQA
VDRGVALGADALIIADLAVLDYASRHYPDMELHVSVQASATNAAAIRFYQQHFNVGRVVLPRVLSMHQVRQLARETDVGL
EVFAFGSLCIMAEGRCYLSSYMTGESPNTVGACSPAKFVRWEETPAGLESRLNEVLIDRYGPGENAGYPTLCKGRFEVDG
QTYHALEEPTSLNTLGLLPELFQTGIQSVKIEGRQRSPAYVEQVTRVWRAAIDAYQANPEAYQVKAEWDAQLARVSEGSQ
TTLGAYHRQWQ
>Mature_331_residues
MELLCPAGSLPALKTAVDNGADAVYIGFKDDTNARHFAGLNFTDSKLEKAVDYVHQHGRKLHIAINTFAHPGSDTRWKQA
VDRGVALGADALIIADLAVLDYASRHYPDMELHVSVQASATNAAAIRFYQQHFNVGRVVLPRVLSMHQVRQLARETDVGL
EVFAFGSLCIMAEGRCYLSSYMTGESPNTVGACSPAKFVRWEETPAGLESRLNEVLIDRYGPGENAGYPTLCKGRFEVDG
QTYHALEEPTSLNTLGLLPELFQTGIQSVKIEGRQRSPAYVEQVTRVWRAAIDAYQANPEAYQVKAEWDAQLARVSEGSQ
TTLGAYHRQWQ

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1789548, Length=331, Percent_Identity=74.0181268882175, Blast_Score=521, Evalue=1e-149,
Organism=Escherichia coli, GI1788397, Length=315, Percent_Identity=30.4761904761905, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI87081910, Length=320, Percent_Identity=30.3125, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 36558; Mature: 36558

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLCPAGSLPALKTAVDNGADAVYIGFKDDTNARHFAGLNFTDSKLEKAVDYVHQHGRK
CCEECCCCCCCHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCE
LHIAINTFAHPGSDTRWKQAVDRGVALGADALIIADLAVLDYASRHYPDMELHVSVQASA
EEEEEEECCCCCCCHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECC
TNAAAIRFYQQHFNVGRVVLPRVLSMHQVRQLARETDVGLEVFAFGSLCIMAEGRCYLSS
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCEEEHH
YMTGESPNTVGACSPAKFVRWEETPAGLESRLNEVLIDRYGPGENAGYPTLCKGRFEVDG
HCCCCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCEEEECC
QTYHALEEPTSLNTLGLLPELFQTGIQSVKIEGRQRSPAYVEQVTRVWRAAIDAYQANPE
CEEEHHCCCCCCCHHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCC
AYQVKAEWDAQLARVSEGSQTTLGAYHRQWQ
EEEEEEHHHHHHHHHCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MELLCPAGSLPALKTAVDNGADAVYIGFKDDTNARHFAGLNFTDSKLEKAVDYVHQHGRK
CCEECCCCCCCHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCE
LHIAINTFAHPGSDTRWKQAVDRGVALGADALIIADLAVLDYASRHYPDMELHVSVQASA
EEEEEEECCCCCCCHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECC
TNAAAIRFYQQHFNVGRVVLPRVLSMHQVRQLARETDVGLEVFAFGSLCIMAEGRCYLSS
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCEEEHH
YMTGESPNTVGACSPAKFVRWEETPAGLESRLNEVLIDRYGPGENAGYPTLCKGRFEVDG
HCCCCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCEEEECC
QTYHALEEPTSLNTLGLLPELFQTGIQSVKIEGRQRSPAYVEQVTRVWRAAIDAYQANPE
CEEEHHCCCCCCCHHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCC
AYQVKAEWDAQLARVSEGSQTTLGAYHRQWQ
EEEEEEHHHHHHHHHCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]