Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402

Click here to switch to the map view.

The map label for this gene is 145299546

Identifier: 145299546

GI number: 145299546

Start: 2796517

End: 2796933

Strand: Direct

Name: 145299546

Synonym: ASA_2615

Alternate gene names: NA

Gene position: 2796517-2796933 (Clockwise)

Preceding gene: 145299525

Following gene: 145299548

Centisome position: 59.47

GC content: 63.31

Gene sequence:

>417_bases
ATGTGCCCACGCTGGCTTTATGAGAGGTTGCCTGCCTGCTATCTGTTGACGGCGGTCGGCATGATCATGCTCACCGACTC
CCCTTTGCTCTGGCTGGCAGGTGCCTTGCTGTTTGTGGCTGGTGCGGCAAGCTGGATGATGCGCTCCAGCTATCGGCGTA
CCGACCTGGTCATCTTTCCGACCAAGCGCTGGTTCCAGCCGGAATGGCTCTACGAGGCTCAGCCTTTTATCTGGCTGGCG
CTGGGGTTGCTGCTCTCTCACCTCCCCGACGCCATGGCCCTGGTGGCCTTGCTTCCTTGTGCCTGGGCATGCCGCTGCCT
GTGGGTTCGCAGTCACTACCGCCACCATGCCGCTGGCCTGGCTTCACACCTGAGACGGGATCCCGCCCGTCGGCGCAGGG
TGCGACTCCTGCGCTGA

Upstream 100 bases:

>100_bases
TTTCACAACAAAACCGTCATTTTGTAGAACAAAGCATCATTAGCCAACCGGGGAGGCTGGCTAAACTTGGAGGATGGAGA
AGGAAACGAGTGGAGGCGAC

Downstream 100 bases:

>100_bases
CAGGGTGCGCGCACCTTCGATAAAGGTGGCGAGATCCATCAAGGAATAGCGCATCAGGCTCGGCAAACCGTCCAGATCCA
GGCTGTCCATCAGATTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MCPRWLYERLPACYLLTAVGMIMLTDSPLLWLAGALLFVAGAASWMMRSSYRRTDLVIFPTKRWFQPEWLYEAQPFIWLA
LGLLLSHLPDAMALVALLPCAWACRCLWVRSHYRHHAAGLASHLRRDPARRRRVRLLR

Sequences:

>Translated_138_residues
MCPRWLYERLPACYLLTAVGMIMLTDSPLLWLAGALLFVAGAASWMMRSSYRRTDLVIFPTKRWFQPEWLYEAQPFIWLA
LGLLLSHLPDAMALVALLPCAWACRCLWVRSHYRHHAAGLASHLRRDPARRRRVRLLR
>Mature_138_residues
MCPRWLYERLPACYLLTAVGMIMLTDSPLLWLAGALLFVAGAASWMMRSSYRRTDLVIFPTKRWFQPEWLYEAQPFIWLA
LGLLLSHLPDAMALVALLPCAWACRCLWVRSHYRHHAAGLASHLRRDPARRRRVRLLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16118; Mature: 16118

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCPRWLYERLPACYLLTAVGMIMLTDSPLLWLAGALLFVAGAASWMMRSSYRRTDLVIFP
CCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
TKRWFQPEWLYEAQPFIWLALGLLLSHLPDAMALVALLPCAWACRCLWVRSHYRHHAAGL
CCCCCCCCHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASHLRRDPARRRRVRLLR
HHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MCPRWLYERLPACYLLTAVGMIMLTDSPLLWLAGALLFVAGAASWMMRSSYRRTDLVIFP
CCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
TKRWFQPEWLYEAQPFIWLALGLLLSHLPDAMALVALLPCAWACRCLWVRSHYRHHAAGL
CCCCCCCCHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASHLRRDPARRRRVRLLR
HHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA