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The map label for this gene is 145299339

Identifier: 145299339

GI number: 145299339

Start: 2543663

End: 2544667

Strand: Direct

Name: 145299339

Synonym: ASA_2386

Alternate gene names: NA

Gene position: 2543663-2544667 (Clockwise)

Preceding gene: 145299338

Following gene: 145299343

Centisome position: 54.09

GC content: 56.12

Gene sequence:

>1005_bases
ATGAAACTGAGCTTGATCAGTGCTCTGGTGCTTGGCGCCAGCATGCTCTACCCGTCAGAAAGTACTGCCATGGTCAAGGG
AGCCGACGTCAGCTGGCTAACCCAGATGGAGCAGTCCGGCTACAGGTTTTACAACGACAGTGGCAAGCAGCAAGATCTGT
TACTCACCCTGAAGCAGCACGGCATCAACGCCATCCGGCTGCGGGTCTGGGTCAATCCGGCCGGAGGCTGGAATAGCCTC
AACGATGTCATCGCCAAAGCCAAACGGGCCAAGGCGGCGGGCCTCGATATCATGATCGACTTTCACTACAGCGACAGCTG
GGCCGACCCGGGTAAACAGACCAAACCGGCCGCCTGGCAGGGCTATACCTTCGAGCAGTTGATGTCCAACGTCTACTGGC
ATACCTACAACTCGCTCGTCGCCCTGAAGCAGGCCGGCATCACGCCAAAATGGGTACAAGTTGGCAACGAGACCAACAAT
GGCATGCTGTGGGATGACGGCAAGGCATCGGCCAACATGCGCAATTTTGCCTGGCTGATCAACAGTGGTTATGACGCCGT
CAAGGCCGTCAACAAGTCGACCAAGGTGATAGTCCATCTCGCCAACTGCGAGAACAATGCCCTTTACCGCTGGATGTTTG
ACGGCCTCAAGGCCAATGGCGCCAAGTGGGATGTGATCGGCGCATCCATCTACCCCACCCAGACCGGCAATGGCGATTGG
TTCTCCATGAACAACCGTTGCTATGACAACCTTGCCGATATGGTCAGCCGCCATGGCAAGGAGGTAATGATAGTGGAGGT
GGGCATGCCCTGGGATGATCCGAAAAACAGCTACGACACCCTGGTCGACCTGCTCAACAAGATGAAATGGATCCCGGACA
ACAAGGGATTGGGCGTCTTCTACTGGGAACCCCAGAGCCATAACGGCTGGCAGAATTACTCGCTCGGCCTGATGGAACAA
GGTGGCAAACCCACCTATGCCATGGATGCGTTCCTGCAAAACTGA

Upstream 100 bases:

>100_bases
TGGCCATGGCGCATCCAGGCAGGCGATTGCCCTACAAGCTTCCCCCCTGCCCCGGGTTCAGCCATGAGCCCAACCCCTTT
TCAATTACGGAGAAACAAGG

Downstream 100 bases:

>100_bases
TCGCAACATCACCACTGATAGCAGGGGGAGCTCTTGGCATCCCCCTGCGCTTCAAACAAGCCTTACTCTTTTTTCGTCAC
CGATCTCACCGCCAGAGCCA

Product: arabinogalactan endo-1,4-beta-galactosidase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKLSLISALVLGASMLYPSESTAMVKGADVSWLTQMEQSGYRFYNDSGKQQDLLLTLKQHGINAIRLRVWVNPAGGWNSL
NDVIAKAKRAKAAGLDIMIDFHYSDSWADPGKQTKPAAWQGYTFEQLMSNVYWHTYNSLVALKQAGITPKWVQVGNETNN
GMLWDDGKASANMRNFAWLINSGYDAVKAVNKSTKVIVHLANCENNALYRWMFDGLKANGAKWDVIGASIYPTQTGNGDW
FSMNNRCYDNLADMVSRHGKEVMIVEVGMPWDDPKNSYDTLVDLLNKMKWIPDNKGLGVFYWEPQSHNGWQNYSLGLMEQ
GGKPTYAMDAFLQN

Sequences:

>Translated_334_residues
MKLSLISALVLGASMLYPSESTAMVKGADVSWLTQMEQSGYRFYNDSGKQQDLLLTLKQHGINAIRLRVWVNPAGGWNSL
NDVIAKAKRAKAAGLDIMIDFHYSDSWADPGKQTKPAAWQGYTFEQLMSNVYWHTYNSLVALKQAGITPKWVQVGNETNN
GMLWDDGKASANMRNFAWLINSGYDAVKAVNKSTKVIVHLANCENNALYRWMFDGLKANGAKWDVIGASIYPTQTGNGDW
FSMNNRCYDNLADMVSRHGKEVMIVEVGMPWDDPKNSYDTLVDLLNKMKWIPDNKGLGVFYWEPQSHNGWQNYSLGLMEQ
GGKPTYAMDAFLQN
>Mature_334_residues
MKLSLISALVLGASMLYPSESTAMVKGADVSWLTQMEQSGYRFYNDSGKQQDLLLTLKQHGINAIRLRVWVNPAGGWNSL
NDVIAKAKRAKAAGLDIMIDFHYSDSWADPGKQTKPAAWQGYTFEQLMSNVYWHTYNSLVALKQAGITPKWVQVGNETNN
GMLWDDGKASANMRNFAWLINSGYDAVKAVNKSTKVIVHLANCENNALYRWMFDGLKANGAKWDVIGASIYPTQTGNGDW
FSMNNRCYDNLADMVSRHGKEVMIVEVGMPWDDPKNSYDTLVDLLNKMKWIPDNKGLGVFYWEPQSHNGWQNYSLGLMEQ
GGKPTYAMDAFLQN

Specific function: Unknown

COG id: COG3867

COG function: function code G; Arabinogalactan endo-1,4-beta-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011683
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF07745 Glyco_hydro_53 [H]

EC number: NA

Molecular weight: Translated: 37551; Mature: 37551

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSLISALVLGASMLYPSESTAMVKGADVSWLTQMEQSGYRFYNDSGKQQDLLLTLKQH
CCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCEEECCCCCCCCEEEEEHHC
GINAIRLRVWVNPAGGWNSLNDVIAKAKRAKAAGLDIMIDFHYSDSWADPGKQTKPAAWQ
CCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCC
GYTFEQLMSNVYWHTYNSLVALKQAGITPKWVQVGNETNNGMLWDDGKASANMRNFAWLI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCEEECCCCCCCCCCEEEEEE
NSGYDAVKAVNKSTKVIVHLANCENNALYRWMFDGLKANGAKWDVIGASIYPTQTGNGDW
ECCCHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECEEECCCCCCCCE
FSMNNRCYDNLADMVSRHGKEVMIVEVGMPWDDPKNSYDTLVDLLNKMKWIPDNKGLGVF
EECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE
YWEPQSHNGWQNYSLGLMEQGGKPTYAMDAFLQN
EECCCCCCCCCCCEEEHEECCCCCCHHHHHHHCC
>Mature Secondary Structure
MKLSLISALVLGASMLYPSESTAMVKGADVSWLTQMEQSGYRFYNDSGKQQDLLLTLKQH
CCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCEEECCCCCCCCEEEEEHHC
GINAIRLRVWVNPAGGWNSLNDVIAKAKRAKAAGLDIMIDFHYSDSWADPGKQTKPAAWQ
CCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCC
GYTFEQLMSNVYWHTYNSLVALKQAGITPKWVQVGNETNNGMLWDDGKASANMRNFAWLI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCEEECCCCCCCCCCEEEEEE
NSGYDAVKAVNKSTKVIVHLANCENNALYRWMFDGLKANGAKWDVIGASIYPTQTGNGDW
ECCCHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECEEECCCCCCCCE
FSMNNRCYDNLADMVSRHGKEVMIVEVGMPWDDPKNSYDTLVDLLNKMKWIPDNKGLGVF
EECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE
YWEPQSHNGWQNYSLGLMEQGGKPTYAMDAFLQN
EECCCCCCCCCCCEEEHEECCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA