| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is yedA [C]
Identifier: 145299214
GI number: 145299214
Start: 2386755
End: 2387672
Strand: Direct
Name: yedA [C]
Synonym: ASA_2256
Alternate gene names: 145299214
Gene position: 2386755-2387672 (Clockwise)
Preceding gene: 145299210
Following gene: 145299215
Centisome position: 50.76
GC content: 62.64
Gene sequence:
>918_bases ATGAATCTCCTGCTCTATCTTGCCACCGTCCTTATCTGGGGCAGCACCTGGATCGCCATCGCCTGGCAGCTCGGACCCAT TCCCATCGAGGTGTCCGTGCTCTATCGCTTCCTGCTGGCGGCGCTTGCGCTGTTTGCCCTGCTCACCGTCAGCGGCCGCT TCCCGCGCCTGCCCTGGGCGGGCCAGCGCTACGCGGCCCTGCTCGGCGCCCTGCTCTTTTCCACCAACTTTCTCTGCTTC TATCATGCCACCCTCTACATACCGAGTGGCCTGTCGGCGGTGATCTTCGCCAGTGCCAGCATCTTCAACGGCCTCAATCT CTGGCTGTTCGAGGGCAAACGCCCAAACTTGCGCTGGCTGCAAGGATCCGTGCTGGGATTGTTTGGCACCCTGTTGCTGT TCTGGCCCGTGCTGGCGGATGCGCAACTGGGTGCAAACGGCTGGAAGGGGTTGCTGCTGGCCTGTGGCGGCACCCTCTGC TTCTCGCTGGGCAACCTGGTCTCTGCCCGCGGCCAGCGTCACGGCTATCACGTGCTGCAACTGGTGCCCTGGGGCATGGT ATACGGCGTCGTGCTGTTGCTGGGCTGGGTCACCCTGCTCGGCCAATCCCTGACCATACCGACCGACGGCCATTATCTGG CGGCCATGCTCTATCTCGCCCTGTTCGGCTCTGTCATCGCCTTCACTGCCTACCTCACACTCGTGGGCAGGATTGGCGCC AGCAAGGCCTCCTACGCCACTGTGCTGTTCCCGCTGGTAGCGCTCACGCTCTCGACGTTTTATGAAGGGTTTGTCTGGCA GACGGTCTCAGTGGTGGGCGTTGTGATCAGTTTGCTCGGCAATCTGGTGATCTTCACCCCACCCTTGCGGGAGTGGCGCT GGCGGCCTGCCAAGGCGGTGAACGACACTTGCTCCTGA
Upstream 100 bases:
>100_bases GGCTGCGCCCGGCTGAAATAACCGCAAGATGGTGTAAGCCAGCACAACCTTGCCCGCCCCATGCTGTGGTCCATGCCATT CCCACTTCACCGGATGTGTT
Downstream 100 bases:
>100_bases CGCCATCAGCCCCTAAGGTAACGCCATTCGATATACGGTGAGACACCAGGGGCCCTAATGTTACTGGAAGGATTGGAGAC ACTCAGCCTGCTGGCAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MNLLLYLATVLIWGSTWIAIAWQLGPIPIEVSVLYRFLLAALALFALLTVSGRFPRLPWAGQRYAALLGALLFSTNFLCF YHATLYIPSGLSAVIFASASIFNGLNLWLFEGKRPNLRWLQGSVLGLFGTLLLFWPVLADAQLGANGWKGLLLACGGTLC FSLGNLVSARGQRHGYHVLQLVPWGMVYGVVLLLGWVTLLGQSLTIPTDGHYLAAMLYLALFGSVIAFTAYLTLVGRIGA SKASYATVLFPLVALTLSTFYEGFVWQTVSVVGVVISLLGNLVIFTPPLREWRWRPAKAVNDTCS
Sequences:
>Translated_305_residues MNLLLYLATVLIWGSTWIAIAWQLGPIPIEVSVLYRFLLAALALFALLTVSGRFPRLPWAGQRYAALLGALLFSTNFLCF YHATLYIPSGLSAVIFASASIFNGLNLWLFEGKRPNLRWLQGSVLGLFGTLLLFWPVLADAQLGANGWKGLLLACGGTLC FSLGNLVSARGQRHGYHVLQLVPWGMVYGVVLLLGWVTLLGQSLTIPTDGHYLAAMLYLALFGSVIAFTAYLTLVGRIGA SKASYATVLFPLVALTLSTFYEGFVWQTVSVVGVVISLLGNLVIFTPPLREWRWRPAKAVNDTCS >Mature_305_residues MNLLLYLATVLIWGSTWIAIAWQLGPIPIEVSVLYRFLLAALALFALLTVSGRFPRLPWAGQRYAALLGALLFSTNFLCF YHATLYIPSGLSAVIFASASIFNGLNLWLFEGKRPNLRWLQGSVLGLFGTLLLFWPVLADAQLGANGWKGLLLACGGTLC FSLGNLVSARGQRHGYHVLQLVPWGMVYGVVLLLGWVTLLGQSLTIPTDGHYLAAMLYLALFGSVIAFTAYLTLVGRIGA SKASYATVLFPLVALTLSTFYEGFVWQTVSVVGVVISLLGNLVIFTPPLREWRWRPAKAVNDTCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33305; Mature: 33305
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLLYLATVLIWGSTWIAIAWQLGPIPIEVSVLYRFLLAALALFALLTVSGRFPRLPWA CHHHHHHHHHHHHCCHHEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GQRYAALLGALLFSTNFLCFYHATLYIPSGLSAVIFASASIFNGLNLWLFEGKRPNLRWL CHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHH QGSVLGLFGTLLLFWPVLADAQLGANGWKGLLLACGGTLCFSLGNLVSARGQRHGYHVLQ HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LVPWGMVYGVVLLLGWVTLLGQSLTIPTDGHYLAAMLYLALFGSVIAFTAYLTLVGRIGA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKASYATVLFPLVALTLSTFYEGFVWQTVSVVGVVISLLGNLVIFTPPLREWRWRPAKAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHCCCCCCCC NDTCS CCCCC >Mature Secondary Structure MNLLLYLATVLIWGSTWIAIAWQLGPIPIEVSVLYRFLLAALALFALLTVSGRFPRLPWA CHHHHHHHHHHHHCCHHEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GQRYAALLGALLFSTNFLCFYHATLYIPSGLSAVIFASASIFNGLNLWLFEGKRPNLRWL CHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHH QGSVLGLFGTLLLFWPVLADAQLGANGWKGLLLACGGTLCFSLGNLVSARGQRHGYHVLQ HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LVPWGMVYGVVLLLGWVTLLGQSLTIPTDGHYLAAMLYLALFGSVIAFTAYLTLVGRIGA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKASYATVLFPLVALTLSTFYEGFVWQTVSVVGVVISLLGNLVIFTPPLREWRWRPAKAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHCCCCCCCC NDTCS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA