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The map label for this gene is ycbC [H]

Identifier: 145299198

GI number: 145299198

Start: 2365214

End: 2365984

Strand: Direct

Name: ycbC [H]

Synonym: ASA_2231

Alternate gene names: 145299198

Gene position: 2365214-2365984 (Clockwise)

Preceding gene: 145299190

Following gene: 145299199

Centisome position: 50.3

GC content: 59.14

Gene sequence:

>771_bases
TTGTTTGTTATCAACAAATGGCTAGGCCAATTGCTGATGCCACTGCCCTTTTCCCTCTCCTTATTGCTGCTGGCGCTTTT
GCTGCTCTGGTTCACCCGCTTTCAGAAAACCGGCAAGCTGCTGGCGACCTGCTCCCTGGTCATTGTTGCTCTGATGGGGA
TGCGGCCGGTTAGCTATGAGCTGGCCAGAGGGCTGGAGCAGACCTTCCCGCCGTTCGAGATAAGCCAACACCCGGATATA
GAGGCTATCGTGGTGCTGGGCAACGGCCATGTGAGCGATCCGGCGATCCCTGAGCGCGCCTGGCAGAACAATATCGCCCT
CGCAAGAACCCTGGAAGGCGTACGCCTCGCCCTGGCTTACCCTCAGGCCACACTGGTCTTCTCCGGCTATGTATCGGGGG
ATCCCCTCTCCAACGCCGAGGTCAATGCCCGCATGGCGGCCAGCCTGGGGATAGAGAGATCCCGAATGACGTTGTTTGAA
AACAACCAAGACACCCATGACGAGGCCGTCAGCATCAGCCGTTATCTCAAGGGCAAGCAGGTGGCGCTGGTCAGTTCGGC
CACCCACCTGCCGCGAGCCATGGCGCTGTATCAAGGGCAGGGACTCGATGCGGTGCCGGCCCCCACCGACTACACAGCCA
AGCAGAGTCAGGTGGCGCAACCCCTCTACAGCTACCTGCCAAAGGGGCGTTATCTGATGTATTCCGAGGCTGCCATTCAC
GAATGGATTGGGGTATGGTGGGCCCGTTTGCGAGGGCAGGTTAACGATTGA

Upstream 100 bases:

>100_bases
GGGCCTGACGAAAAAAGAGGGGTATTCTGTCACATCCCGAATTTGCTGAAAACTCAAGGACGACATCCCAGTGTTTGAGC
TCAACCTGTTTGCCGCCAAC

Downstream 100 bases:

>100_bases
GCAATCGAGCCTTTCATTCCTGATTTGGATCAGGAAAGCGAAAAAAAATTACGTCATTTGCCGCCGGGTCAGCTATCTTG
GGCTCGGTTCAATTCATATA

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MFVINKWLGQLLMPLPFSLSLLLLALLLLWFTRFQKTGKLLATCSLVIVALMGMRPVSYELARGLEQTFPPFEISQHPDI
EAIVVLGNGHVSDPAIPERAWQNNIALARTLEGVRLALAYPQATLVFSGYVSGDPLSNAEVNARMAASLGIERSRMTLFE
NNQDTHDEAVSISRYLKGKQVALVSSATHLPRAMALYQGQGLDAVPAPTDYTAKQSQVAQPLYSYLPKGRYLMYSEAAIH
EWIGVWWARLRGQVND

Sequences:

>Translated_256_residues
MFVINKWLGQLLMPLPFSLSLLLLALLLLWFTRFQKTGKLLATCSLVIVALMGMRPVSYELARGLEQTFPPFEISQHPDI
EAIVVLGNGHVSDPAIPERAWQNNIALARTLEGVRLALAYPQATLVFSGYVSGDPLSNAEVNARMAASLGIERSRMTLFE
NNQDTHDEAVSISRYLKGKQVALVSSATHLPRAMALYQGQGLDAVPAPTDYTAKQSQVAQPLYSYLPKGRYLMYSEAAIH
EWIGVWWARLRGQVND
>Mature_256_residues
MFVINKWLGQLLMPLPFSLSLLLLALLLLWFTRFQKTGKLLATCSLVIVALMGMRPVSYELARGLEQTFPPFEISQHPDI
EAIVVLGNGHVSDPAIPERAWQNNIALARTLEGVRLALAYPQATLVFSGYVSGDPLSNAEVNARMAASLGIERSRMTLFE
NNQDTHDEAVSISRYLKGKQVALVSSATHLPRAMALYQGQGLDAVPAPTDYTAKQSQVAQPLYSYLPKGRYLMYSEAAIH
EWIGVWWARLRGQVND

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=253, Percent_Identity=36.3636363636364, Blast_Score=138, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 28413; Mature: 28413

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVINKWLGQLLMPLPFSLSLLLLALLLLWFTRFQKTGKLLATCSLVIVALMGMRPVSYE
CEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LARGLEQTFPPFEISQHPDIEAIVVLGNGHVSDPAIPERAWQNNIALARTLEGVRLALAY
HHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHEEEEEC
PQATLVFSGYVSGDPLSNAEVNARMAASLGIERSRMTLFENNQDTHDEAVSISRYLKGKQ
CCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHEEECCCCCCHHHHHHHHHHHCCCE
VALVSSATHLPRAMALYQGQGLDAVPAPTDYTAKQSQVAQPLYSYLPKGRYLMYSEAAIH
EEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHH
EWIGVWWARLRGQVND
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFVINKWLGQLLMPLPFSLSLLLLALLLLWFTRFQKTGKLLATCSLVIVALMGMRPVSYE
CEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LARGLEQTFPPFEISQHPDIEAIVVLGNGHVSDPAIPERAWQNNIALARTLEGVRLALAY
HHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHEEEEEC
PQATLVFSGYVSGDPLSNAEVNARMAASLGIERSRMTLFENNQDTHDEAVSISRYLKGKQ
CCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHEEECCCCCCHHHHHHHHHHHCCCE
VALVSSATHLPRAMALYQGQGLDAVPAPTDYTAKQSQVAQPLYSYLPKGRYLMYSEAAIH
EEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHH
EWIGVWWARLRGQVND
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]