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The map label for this gene is yeiE [H]

Identifier: 145299167

GI number: 145299167

Start: 2329644

End: 2330573

Strand: Direct

Name: yeiE [H]

Synonym: ASA_2198

Alternate gene names: 145299167

Gene position: 2329644-2330573 (Clockwise)

Preceding gene: 145299162

Following gene: 145299171

Centisome position: 49.54

GC content: 62.8

Gene sequence:

>930_bases
ATGAAACTGACCCTGCAACAACTCAAGGTCTTCGCCACCATAGCCCGCTACGGCAATCTGGGGCTGGCCGCCAACGAGCT
CTGCCTGAGCAAGGGCGCCGTCTCCCAGTCATTGCAGGAACTGGAGCGCCAGCTCGCCACCCCCTTGTTCGATCGCATCC
ACCCCAGATTGCAGCTCAACAACGAGGGGCGCCTGCTGCAACCGGCCGCCGAAGAGTTGCTGACCCGGATGCAGGATATC
GAAACCCTGTTCAGCCCCGATACCGAGCCGAGCGGCCAGCTGCGCCTGGGAGCGAGCCAGACCATAGGCAACTACCTGCT
CCCCACCCTGCTGGCCAGCAGCAAACAGGAGCTGGGCCTGCCCCCCAGGGTCACCATTACCAACACCCACCAGCTGTGCC
ATTTGCTGGCCAACTTCGAGCTGGATCTGGCCTTGATAGAGGGGCAGAACCACCATGCTGATCTGGTGAGTGAACCCTGG
CTCAATGACGAGATGCTGATCGTGGCTCATCCCGATCATCCCCTCGCCCGGCGCAGCCGCCTGTCGCTCAGCCAGCTGAG
CGATGAAACCTGGGTGCTGCGCGAACCACAGTCAGGCAGCCGCGAGCAATTCGAGCAACAGATCCAGCCCGGGCTGCCTC
GCTGGCAGGTAGGGCTGGAGCTCAACACCCTGGAGGCCGTGATGCTGGCGGTTGAAAAGGGGCTGGGGATCTCCTTCATC
TCCCGCCTGGCGGTGTCGGATCGGTTGCAGGCCGGTCGTCTGGTGGCCTTCTCCCTTGCCCGGCGTTTTCCCCGCCAGCT
CTCCCTCATCTGGCACCGGCAGAAATACCACTCCGCCACCTTGCGCCGCTTTCTGCAGTTTTGCCGCGCACAAGAGGGGG
CCCTGCCTCAACCCCTGGCGGACATAACCACTCGGACAAAATCTCAATAA

Upstream 100 bases:

>100_bases
TGGCTGAAACCTCTTGTGAGAGACGATGAGCATAGGATAAAACGCCGCTATCGTTTACGATATCTAAATGAATTGAATCA
ATTGTTCAGGTAAACCAAAC

Downstream 100 bases:

>100_bases
GATGATCGGACTCCCCCTTGCGCAGAGAAAAAAGAGAGGGCGCCCAGGCGCCCTCTCTGTCTATCCGTTATCAGGGTGCG
GGTTGCAAACCGCGCTCGAC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKLTLQQLKVFATIARYGNLGLAANELCLSKGAVSQSLQELERQLATPLFDRIHPRLQLNNEGRLLQPAAEELLTRMQDI
ETLFSPDTEPSGQLRLGASQTIGNYLLPTLLASSKQELGLPPRVTITNTHQLCHLLANFELDLALIEGQNHHADLVSEPW
LNDEMLIVAHPDHPLARRSRLSLSQLSDETWVLREPQSGSREQFEQQIQPGLPRWQVGLELNTLEAVMLAVEKGLGISFI
SRLAVSDRLQAGRLVAFSLARRFPRQLSLIWHRQKYHSATLRRFLQFCRAQEGALPQPLADITTRTKSQ

Sequences:

>Translated_309_residues
MKLTLQQLKVFATIARYGNLGLAANELCLSKGAVSQSLQELERQLATPLFDRIHPRLQLNNEGRLLQPAAEELLTRMQDI
ETLFSPDTEPSGQLRLGASQTIGNYLLPTLLASSKQELGLPPRVTITNTHQLCHLLANFELDLALIEGQNHHADLVSEPW
LNDEMLIVAHPDHPLARRSRLSLSQLSDETWVLREPQSGSREQFEQQIQPGLPRWQVGLELNTLEAVMLAVEKGLGISFI
SRLAVSDRLQAGRLVAFSLARRFPRQLSLIWHRQKYHSATLRRFLQFCRAQEGALPQPLADITTRTKSQ
>Mature_309_residues
MKLTLQQLKVFATIARYGNLGLAANELCLSKGAVSQSLQELERQLATPLFDRIHPRLQLNNEGRLLQPAAEELLTRMQDI
ETLFSPDTEPSGQLRLGASQTIGNYLLPTLLASSKQELGLPPRVTITNTHQLCHLLANFELDLALIEGQNHHADLVSEPW
LNDEMLIVAHPDHPLARRSRLSLSQLSDETWVLREPQSGSREQFEQQIQPGLPRWQVGLELNTLEAVMLAVEKGLGISFI
SRLAVSDRLQAGRLVAFSLARRFPRQLSLIWHRQKYHSATLRRFLQFCRAQEGALPQPLADITTRTKSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=292, Percent_Identity=41.7808219178082, Blast_Score=215, Evalue=3e-57,
Organism=Escherichia coli, GI87082132, Length=257, Percent_Identity=23.7354085603113, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI157672245, Length=295, Percent_Identity=25.4237288135593, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1788748, Length=301, Percent_Identity=26.578073089701, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787601, Length=285, Percent_Identity=25.6140350877193, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI145693105, Length=249, Percent_Identity=24.4979919678715, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790399, Length=275, Percent_Identity=22.9090909090909, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1786401, Length=294, Percent_Identity=23.1292517006803, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789639, Length=114, Percent_Identity=30.7017543859649, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1787530, Length=254, Percent_Identity=24.4094488188976, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1788296, Length=196, Percent_Identity=31.1224489795918, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1788706, Length=261, Percent_Identity=26.0536398467433, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34819; Mature: 34819

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTLQQLKVFATIARYGNLGLAANELCLSKGAVSQSLQELERQLATPLFDRIHPRLQLN
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
NEGRLLQPAAEELLTRMQDIETLFSPDTEPSGQLRLGASQTIGNYLLPTLLASSKQELGL
CCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHCCHHHCCC
PPRVTITNTHQLCHLLANFELDLALIEGQNHHADLVSEPWLNDEMLIVAHPDHPLARRSR
CCEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHH
LSLSQLSDETWVLREPQSGSREQFEQQIQPGLPRWQVGLELNTLEAVMLAVEKGLGISFI
HHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCEEECEEHHHHHHHHHHHHHCCCHHHH
SRLAVSDRLQAGRLVAFSLARRFPRQLSLIWHRQKYHSATLRRFLQFCRAQEGALPQPLA
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
DITTRTKSQ
HHHHHCCCC
>Mature Secondary Structure
MKLTLQQLKVFATIARYGNLGLAANELCLSKGAVSQSLQELERQLATPLFDRIHPRLQLN
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
NEGRLLQPAAEELLTRMQDIETLFSPDTEPSGQLRLGASQTIGNYLLPTLLASSKQELGL
CCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHCCHHHCCC
PPRVTITNTHQLCHLLANFELDLALIEGQNHHADLVSEPWLNDEMLIVAHPDHPLARRSR
CCEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHH
LSLSQLSDETWVLREPQSGSREQFEQQIQPGLPRWQVGLELNTLEAVMLAVEKGLGISFI
HHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCEEECEEHHHHHHHHHHHHHCCCHHHH
SRLAVSDRLQAGRLVAFSLARRFPRQLSLIWHRQKYHSATLRRFLQFCRAQEGALPQPLA
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
DITTRTKSQ
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]