| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yvnB [H]
Identifier: 145297054
GI number: 145297054
Start: 3272505
End: 3274067
Strand: Direct
Name: yvnB [H]
Synonym: cgR_2950
Alternate gene names: 145297054
Gene position: 3272505-3274067 (Clockwise)
Preceding gene: 145297053
Following gene: 145297055
Centisome position: 98.74
GC content: 56.88
Gene sequence:
>1563_bases GTGGACGCCGCAGATGAGCTCGCGGCCGACACTGAAGTGCGCCTGAATTGGGCGGGATCCGCCGATGGTCGCGCGCAAGT AATCATGTATGTTTTCGATGGTGAATCGTGGATCGAGGTGGATCGCCATCTCACCGGCACTGAAATGGAAGAGTTCGCAC TGCAGGGCGTGGTCAATGCCGCTGACTACGCAATCGATGGAACCGTCACCGTACTGATTCAGCATTCCGAAGGCTTCGCC GGGGCGGATTTCACCACTAGAACCTCCTCCGTGGAACCTGCACACCCAGATGATGTTGCTCGCTCCGACTACGATTTCAC CCTTGTATGGGAGTCCGACACTCAGTACTACAACGAAGAATTCCACGAGCACCAAACCAAGATCCATGACTACGTGCTCG CCGAACGGGAGAACAAGAACATCCAGTTCATGTTCCACACTGGCGATATTGTCGACGACTGGGATCAGCCCGCACAGTGG GCCGCAGCCAACCCCGAATACCAGCGCCTCGACGACGCTGGCTTGCCATATTCCGTCCTTGCCGGAAACCACGATGTTGG CCACACCAGCAATGACTACACCGAATTCAGCCGACACTTCGGCGAACAGCGCTACACAGACAACCCGTGGTACGGCGAAT CCTACCAAGACAACCGCGGACACTATGACCTGTTCTCTGCAGGCGGCATCGACTTCATCAACGTCGCCATGGGGTGGGGT CCCGGCGATGAGGAGATCGCTTGGATGAACGAGGTCCTGGCCAAGCATCCCGAGCGTGTGGCGATCCTCAACCTCCACGA ATTCATGCTCACCACCGGCGGACTTGGCCCAATCCCGCAGCGCATTCTCGACGAGGTTGCAGCCACCAACCCAAATGTCA GCATGATCATGTCCGGCCACTACCACGACGCATTCCAACGCACCGACTCCTTTGACGACGATGGTGATGGAGTAGATGAC CGCACCGTCACCTCTATGCTTTTCGATTACCAAGGCCTACCGGAAGGCGGACAGGGATACCTTCGACTCCTCCACTTTGA TAACCAGGGCCAGAAGATGATGGTGCGCACCTATTCACCATCCCTGGAGGATTACAACTCTGATGAACCCTCACTGTTGG GGCCTGCAGAAGACCCCAACATGTATCAAGAATTCGAAGTGTCCTACGAGCAGCTCGGCATCAAACCAGAGGCCCGCACC CTGATCGGCGATTCCTTCAGCGCCGATTTCTTGACCTCCAATGAAATTGGAACAGTCGATGAGGTTCCTTCTGGAACGAT CGCTTCCGTGAACTGGAAGGACGTAACCGAAGGTCGCCACAGCTGGTATGTTCGCTCCGAGGATCCTTTCGGCGGCGTCG AGATTTCACCCGTGCAGTCCTTCATTGCCGGGGAAGAGGCTGGCGGGAACGCGCCCGGCACTGGAAGCTCCAGTGGTAGT TCATCCCACGGATTATGGGGTGCGCTTGCGGGATTCTTTGCCGGAGCGGCAGCCCTGGCTGGAGCTGCGATCGCATTTGT CCCCGGAATTTGGGACTATGTCACTAACGCATTCAAGCGATAG
Upstream 100 bases:
>100_bases AAAATGTTGGAGAGGGGAGACGTCGAAAAGCTATCTAGCCTGGATGGGCTGGGCGTGGAAGTTACCTCCGACGCCGCGCT GCCATAATCAGCTTTTTGAG
Downstream 100 bases:
>100_bases TCATGGATAGGAAAACGCTCCACACAGTTTAAGTGTGGAGCGTTTTTCAATGTTTCACGTGAAACATTGGGGTTTTACGC GGGAGTGAAGTGGCTGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MDAADELAADTEVRLNWAGSADGRAQVIMYVFDGESWIEVDRHLTGTEMEEFALQGVVNAADYAIDGTVTVLIQHSEGFA GADFTTRTSSVEPAHPDDVARSDYDFTLVWESDTQYYNEEFHEHQTKIHDYVLAERENKNIQFMFHTGDIVDDWDQPAQW AAANPEYQRLDDAGLPYSVLAGNHDVGHTSNDYTEFSRHFGEQRYTDNPWYGESYQDNRGHYDLFSAGGIDFINVAMGWG PGDEEIAWMNEVLAKHPERVAILNLHEFMLTTGGLGPIPQRILDEVAATNPNVSMIMSGHYHDAFQRTDSFDDDGDGVDD RTVTSMLFDYQGLPEGGQGYLRLLHFDNQGQKMMVRTYSPSLEDYNSDEPSLLGPAEDPNMYQEFEVSYEQLGIKPEART LIGDSFSADFLTSNEIGTVDEVPSGTIASVNWKDVTEGRHSWYVRSEDPFGGVEISPVQSFIAGEEAGGNAPGTGSSSGS SSHGLWGALAGFFAGAAALAGAAIAFVPGIWDYVTNAFKR
Sequences:
>Translated_520_residues MDAADELAADTEVRLNWAGSADGRAQVIMYVFDGESWIEVDRHLTGTEMEEFALQGVVNAADYAIDGTVTVLIQHSEGFA GADFTTRTSSVEPAHPDDVARSDYDFTLVWESDTQYYNEEFHEHQTKIHDYVLAERENKNIQFMFHTGDIVDDWDQPAQW AAANPEYQRLDDAGLPYSVLAGNHDVGHTSNDYTEFSRHFGEQRYTDNPWYGESYQDNRGHYDLFSAGGIDFINVAMGWG PGDEEIAWMNEVLAKHPERVAILNLHEFMLTTGGLGPIPQRILDEVAATNPNVSMIMSGHYHDAFQRTDSFDDDGDGVDD RTVTSMLFDYQGLPEGGQGYLRLLHFDNQGQKMMVRTYSPSLEDYNSDEPSLLGPAEDPNMYQEFEVSYEQLGIKPEART LIGDSFSADFLTSNEIGTVDEVPSGTIASVNWKDVTEGRHSWYVRSEDPFGGVEISPVQSFIAGEEAGGNAPGTGSSSGS SSHGLWGALAGFFAGAAALAGAAIAFVPGIWDYVTNAFKR >Mature_520_residues MDAADELAADTEVRLNWAGSADGRAQVIMYVFDGESWIEVDRHLTGTEMEEFALQGVVNAADYAIDGTVTVLIQHSEGFA GADFTTRTSSVEPAHPDDVARSDYDFTLVWESDTQYYNEEFHEHQTKIHDYVLAERENKNIQFMFHTGDIVDDWDQPAQW AAANPEYQRLDDAGLPYSVLAGNHDVGHTSNDYTEFSRHFGEQRYTDNPWYGESYQDNRGHYDLFSAGGIDFINVAMGWG PGDEEIAWMNEVLAKHPERVAILNLHEFMLTTGGLGPIPQRILDEVAATNPNVSMIMSGHYHDAFQRTDSFDDDGDGVDD RTVTSMLFDYQGLPEGGQGYLRLLHFDNQGQKMMVRTYSPSLEDYNSDEPSLLGPAEDPNMYQEFEVSYEQLGIKPEART LIGDSFSADFLTSNEIGTVDEVPSGTIASVNWKDVTEGRHSWYVRSEDPFGGVEISPVQSFIAGEEAGGNAPGTGSSSGS SSHGLWGALAGFFAGAAALAGAAIAFVPGIWDYVTNAFKR
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR011401 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 57420; Mature: 57420
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAADELAADTEVRLNWAGSADGRAQVIMYVFDGESWIEVDRHLTGTEMEEFALQGVVNA CCCHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHH ADYAIDGTVTVLIQHSEGFAGADFTTRTSSVEPAHPDDVARSDYDFTLVWESDTQYYNEE HHEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCCHHHHHH FHEHQTKIHDYVLAERENKNIQFMFHTGDIVDDWDQPAQWAAANPEYQRLDDAGLPYSVL HHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCHHCCCCCCHHHHCCCCCCEEEE AGNHDVGHTSNDYTEFSRHFGEQRYTDNPWYGESYQDNRGHYDLFSAGGIDFINVAMGWG ECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCC PGDEEIAWMNEVLAKHPERVAILNLHEFMLTTGGLGPIPQRILDEVAATNPNVSMIMSGH CCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECC YHDAFQRTDSFDDDGDGVDDRTVTSMLFDYQGLPEGGQGYLRLLHFDNQGQKMMVRTYSP CHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEECC SLEDYNSDEPSLLGPAEDPNMYQEFEVSYEQLGIKPEARTLIGDSFSADFLTSNEIGTVD CCCCCCCCCCCEECCCCCCCHHHHHHCCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCC EVPSGTIASVNWKDVTEGRHSWYVRSEDPFGGVEISPVQSFIAGEEAGGNAPGTGSSSGS CCCCCCEEECCCHHHCCCCCEEEEECCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCC SSHGLWGALAGFFAGAAALAGAAIAFVPGIWDYVTNAFKR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDAADELAADTEVRLNWAGSADGRAQVIMYVFDGESWIEVDRHLTGTEMEEFALQGVVNA CCCHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHH ADYAIDGTVTVLIQHSEGFAGADFTTRTSSVEPAHPDDVARSDYDFTLVWESDTQYYNEE HHEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCCHHHHHH FHEHQTKIHDYVLAERENKNIQFMFHTGDIVDDWDQPAQWAAANPEYQRLDDAGLPYSVL HHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCHHCCCCCCHHHHCCCCCCEEEE AGNHDVGHTSNDYTEFSRHFGEQRYTDNPWYGESYQDNRGHYDLFSAGGIDFINVAMGWG ECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCC PGDEEIAWMNEVLAKHPERVAILNLHEFMLTTGGLGPIPQRILDEVAATNPNVSMIMSGH CCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECC YHDAFQRTDSFDDDGDGVDDRTVTSMLFDYQGLPEGGQGYLRLLHFDNQGQKMMVRTYSP CHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEECC SLEDYNSDEPSLLGPAEDPNMYQEFEVSYEQLGIKPEARTLIGDSFSADFLTSNEIGTVD CCCCCCCCCCCEECCCCCCCHHHHHHCCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCC EVPSGTIASVNWKDVTEGRHSWYVRSEDPFGGVEISPVQSFIAGEEAGGNAPGTGSSSGS CCCCCCEEECCCHHHCCCCCEEEEECCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCC SSHGLWGALAGFFAGAAALAGAAIAFVPGIWDYVTNAFKR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]