| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145297011
Identifier: 145297011
GI number: 145297011
Start: 3228570
End: 3229697
Strand: Reverse
Name: 145297011
Synonym: cgR_2910
Alternate gene names: NA
Gene position: 3229697-3228570 (Counterclockwise)
Preceding gene: 145297012
Following gene: 145297010
Centisome position: 97.45
GC content: 57.0
Gene sequence:
>1128_bases ATGGGCGCCCCAGGTAAAAACGATTACGCAACTGAACACGTCAAGCAAGAAGTCCCACCCGCAACTCCAGAAGAGCAGGC AGAGCTGGACACCATGTATGAACGTATGGATGACCTGCATCTAAAGCCCCTGTGGACTCAAATCGGTGGGTTGATGCCAA ACCACCCGGAACCACGAGCTGTGGCACACAAGTGGGATTGGGCGGAACTCCTGAAGCTCGCGCAGCGCTCCGGTGAACTC GTTCCAGTTGGGCGCGGTGGCGAACGCCGTGCCATTGGCCTGGCAAACCCAGGTTTAGACGGCAATACCTACATCTCCCC TACTCTGTGGGCAGCGATTCAGTACCTCGCACCAGGTGAAAACGCGCCAGAGCACCGCCACTCACAAAACGCATTCCGCT TTGTTATCGAAGGCGAAGGCGTGTGGACTGTCGTTAACGGCGACCCAGTACCAATGCGCCGCGGCGACTTCCTGCTCACC CCAGGCTGGAACTACCACGGCCACCACAACATCGCGACCGAGCCAATGGCCTGGCTAGACGGCCTCGACATCCCATTTGC CTACCAAATGGACACCGGATTCTTTGAGTACGGCACCGAAAAACTCACTGACGAATCCACCCCAGACCTCTCCCGTTCAG AGCGCCTGTGGGCCCACCCAGGACTTCGCCCAGTCTCCTTCCCAGGAAAAACTTCCTACTCCCCCATCGGCCGCTACGCC TGGGAGCACACCGACGCAGCACTCAACGATCAGCTGGCATTGGAAGAAGCAGGATACCCAGGAACAGTCGCGCCGGGACA TGCTGCGATTCGCTTCTCCAACCCAACTACCGGTGGCGATGTCATGACCACCATCCGCGCAGAGTTCCACCGCCTGCGCC CAGGAGCATCCACTACCCCCATTCACGAGGTAGGAAACCGTTGCTTCCAGGTATTTGAGGGTTCCGCAACAATCAATGTT GGAGATAAAACCTTTGAAGCTAACCACGGCGATGTGATCAATGTACCGTCGTGGCAGAAGTGGAATATCGTCGCTGGCTC TGACGGCGTCGACTTGTTCTGCTTCTCTGATACACCAATTTTCGAGGCCCTTAACCTCGCACGTACTTTTACTCCGGAAG GAATCTAG
Upstream 100 bases:
>100_bases TTCAAGGGCTAGACGTATGCAGGTGTTGGGGATTGCTTATGTCAAGGGCAATCACACCCTTCATACGCATCTACAACATC CGTAAAGGAGGACTCCAACA
Downstream 100 bases:
>100_bases AACTTATGCGTCTTGCAACAATCCGCACCAACGGCATCACCATTGCTGCTCGTGTTGAATCTGAAAACACCGCTACCACC ATCGAGGGCTTTGCCAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain-Containing Protein; 1 2-Dioxygenase; Gentisate 1 2-Dioxygenase Oxidoreductase Protein; Cupin 2 Protein; 1-Hydroxy-2-Naphthoate Dioxygenase; Gentisate 1 2-Dioxygenase Oxidoreductase; Dioxygenase Oxidoreductase Protein; Dioxygenase
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MGAPGKNDYATEHVKQEVPPATPEEQAELDTMYERMDDLHLKPLWTQIGGLMPNHPEPRAVAHKWDWAELLKLAQRSGEL VPVGRGGERRAIGLANPGLDGNTYISPTLWAAIQYLAPGENAPEHRHSQNAFRFVIEGEGVWTVVNGDPVPMRRGDFLLT PGWNYHGHHNIATEPMAWLDGLDIPFAYQMDTGFFEYGTEKLTDESTPDLSRSERLWAHPGLRPVSFPGKTSYSPIGRYA WEHTDAALNDQLALEEAGYPGTVAPGHAAIRFSNPTTGGDVMTTIRAEFHRLRPGASTTPIHEVGNRCFQVFEGSATINV GDKTFEANHGDVINVPSWQKWNIVAGSDGVDLFCFSDTPIFEALNLARTFTPEGI
Sequences:
>Translated_375_residues MGAPGKNDYATEHVKQEVPPATPEEQAELDTMYERMDDLHLKPLWTQIGGLMPNHPEPRAVAHKWDWAELLKLAQRSGEL VPVGRGGERRAIGLANPGLDGNTYISPTLWAAIQYLAPGENAPEHRHSQNAFRFVIEGEGVWTVVNGDPVPMRRGDFLLT PGWNYHGHHNIATEPMAWLDGLDIPFAYQMDTGFFEYGTEKLTDESTPDLSRSERLWAHPGLRPVSFPGKTSYSPIGRYA WEHTDAALNDQLALEEAGYPGTVAPGHAAIRFSNPTTGGDVMTTIRAEFHRLRPGASTTPIHEVGNRCFQVFEGSATINV GDKTFEANHGDVINVPSWQKWNIVAGSDGVDLFCFSDTPIFEALNLARTFTPEGI >Mature_374_residues GAPGKNDYATEHVKQEVPPATPEEQAELDTMYERMDDLHLKPLWTQIGGLMPNHPEPRAVAHKWDWAELLKLAQRSGELV PVGRGGERRAIGLANPGLDGNTYISPTLWAAIQYLAPGENAPEHRHSQNAFRFVIEGEGVWTVVNGDPVPMRRGDFLLTP GWNYHGHHNIATEPMAWLDGLDIPFAYQMDTGFFEYGTEKLTDESTPDLSRSERLWAHPGLRPVSFPGKTSYSPIGRYAW EHTDAALNDQLALEEAGYPGTVAPGHAAIRFSNPTTGGDVMTTIRAEFHRLRPGASTTPIHEVGNRCFQVFEGSATINVG DKTFEANHGDVINVPSWQKWNIVAGSDGVDLFCFSDTPIFEALNLARTFTPEGI
Specific function: Unknown
COG id: COG3435
COG function: function code Q; Gentisate 1,2-dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41433; Mature: 41301
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAPGKNDYATEHVKQEVPPATPEEQAELDTMYERMDDLHLKPLWTQIGGLMPNHPEPRA CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC VAHKWDWAELLKLAQRSGELVPVGRGGERRAIGLANPGLDGNTYISPTLWAAIQYLAPGE HHCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCCCEECHHHHHHHHHHCCCC NAPEHRHSQNAFRFVIEGEGVWTVVNGDPVPMRRGDFLLTPGWNYHGHHNIATEPMAWLD CCCHHHCCCCEEEEEEECCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHC GLDIPFAYQMDTGFFEYGTEKLTDESTPDLSRSERLWAHPGLRPVSFPGKTSYSPIGRYA CCCCCEEEEECCCHHHHCCHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHH WEHTDAALNDQLALEEAGYPGTVAPGHAAIRFSNPTTGGDVMTTIRAEFHRLRPGASTTP HHCCCHHHCCCEEHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC IHEVGNRCFQVFEGSATINVGDKTFEANHGDVINVPSWQKWNIVAGSDGVDLFCFSDTPI HHHHHHHHHHHHCCCEEEEECCEEEECCCCCEEECCCCCEEEEEECCCCCEEEEECCCCH FEALNLARTFTPEGI HHHHHHHHHCCCCCC >Mature Secondary Structure GAPGKNDYATEHVKQEVPPATPEEQAELDTMYERMDDLHLKPLWTQIGGLMPNHPEPRA CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC VAHKWDWAELLKLAQRSGELVPVGRGGERRAIGLANPGLDGNTYISPTLWAAIQYLAPGE HHCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCCCEECHHHHHHHHHHCCCC NAPEHRHSQNAFRFVIEGEGVWTVVNGDPVPMRRGDFLLTPGWNYHGHHNIATEPMAWLD CCCHHHCCCCEEEEEEECCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHC GLDIPFAYQMDTGFFEYGTEKLTDESTPDLSRSERLWAHPGLRPVSFPGKTSYSPIGRYA CCCCCEEEEECCCHHHHCCHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHH WEHTDAALNDQLALEEAGYPGTVAPGHAAIRFSNPTTGGDVMTTIRAEFHRLRPGASTTP HHCCCHHHCCCEEHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC IHEVGNRCFQVFEGSATINVGDKTFEANHGDVINVPSWQKWNIVAGSDGVDLFCFSDTPI HHHHHHHHHHHHCCCEEEEECCEEEECCCCCEEECCCCCEEEEEECCCCCEEEEECCCCH FEALNLARTFTPEGI HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA