| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is macB [H]
Identifier: 145296983
GI number: 145296983
Start: 3196515
End: 3197780
Strand: Reverse
Name: macB [H]
Synonym: cgR_2882
Alternate gene names: 145296983
Gene position: 3197780-3196515 (Counterclockwise)
Preceding gene: 145296984
Following gene: 145296982
Centisome position: 96.49
GC content: 52.21
Gene sequence:
>1266_bases ATGAGCCTTGCAGAATCAATTCTTTTGGCGCTCACCAGCCTGAGAAGCAACAAGATGCGTGCATTGTTGACGCTGTTGGG TGTCATCATTGGTATCGCATCAGTCATCGGAATTTTGACCATTGGTAAAGCCCTGCAGGATCAAACTTTGAATAGTTTGG AAAGCTTGGGCGCGAATGATCTGTCGGCGCAGGTGGAGGAACGCCCCGACGAAGATTCCCCCGAACCCGATATGTTCGCT TTTTCTGGGGCTGCAAACTCTAGTGGCAATCTGATTCCAGAAGAAACAGTTGATACGCTGCGCGATCGTTTCGCGGGCAG CATCACGGGAATCAGCGTTGGCGGAATGGGTACGCAAGGCACTCTCATCGGCGACACCGCAGATCTTAAATCCGATCTCC TCGGCGTCAACGAGGATTATATGTGGATGAATGGCGTCGAAATGAACTACGGCCGCGCCATCACGCAAGACGATGTTGCC GCTCAGCGCCCCGTTGCAGTCATCGCCCCAGACACCTTTAATACGCTTTTCGACGCAAACCCCAACCTCGCTCTGGGGTC CGAAGTAGCTTTTGAACTCAACGGTCAAGAGACATTTTTGCGGGTTATCGGCGTGTATAAAGAAGCCGCAGCAGGTGGAC TTGTGGGAAGCATGCCAACCGTCAACACCTACACCCCATATACGGTGGCCAATGACATCACCCACACGGAAGATGGATTC AACACGTTAAGTATCCGTGCAGCTCAGGGCGTAGACCAGGATTCACTTAAGGGTTCACTGCAGACCTACTTCGACGCGCT GTACGCCAACAATGACTCGCACCACGTTGCCATGTTGGACTTCCGTAAACAGATCGAAGAGTTCAACACCATTCTCGGCG CAATGAGTTTGGGTATCTCAGCCATCGGCGGAATTTCCTTGCTTGTCGGTGGCATCGGAGTGATGAACATTATGTTGGTG TCTGTCACCGAGCGAACCCGCGAAATCGGTGTTCGAAAAGCCCTCGGCGCTCGTCGACGTGACATTCGCCTGCAATTCGT CGTTGAAGCCATGATCATTTGTTTCATCGGTGGCATCCTCGGCGTGCTTTTGGGTGGCATTTTGGGATTGATCATGTCCA GCGCTATTGGCTACATTTCCTTGCCACCACTGAGTGGAATCGTGATCGCCTTGGTATTTTCCATGGCTATCGGCCTGTTT TTCGGCTACTACCCCGCCAACAAGGCAGCAAAGCTCGATCCAATTGACGCCTTGCGTTATGAGTAA
Upstream 100 bases:
>100_bases CCATCGTGTTTATTACTCACAACCCTGAGCTTGCTGATGAATCTGATCGGGTGGTCACCATGGTTGACGGGCGCATCATT GGGTCTGAGGTGAAACACTC
Downstream 100 bases:
>100_bases AAGCCTCGTTTTTAAGGTAGCCACACATCGCACTAGACTGAAGAACTGTGGCTACCTCAAAAATTCTTCTTTATTACGCA TTCACCCCGCTCTCTGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MSLAESILLALTSLRSNKMRALLTLLGVIIGIASVIGILTIGKALQDQTLNSLESLGANDLSAQVEERPDEDSPEPDMFA FSGAANSSGNLIPEETVDTLRDRFAGSITGISVGGMGTQGTLIGDTADLKSDLLGVNEDYMWMNGVEMNYGRAITQDDVA AQRPVAVIAPDTFNTLFDANPNLALGSEVAFELNGQETFLRVIGVYKEAAAGGLVGSMPTVNTYTPYTVANDITHTEDGF NTLSIRAAQGVDQDSLKGSLQTYFDALYANNDSHHVAMLDFRKQIEEFNTILGAMSLGISAIGGISLLVGGIGVMNIMLV SVTERTREIGVRKALGARRRDIRLQFVVEAMIICFIGGILGVLLGGILGLIMSSAIGYISLPPLSGIVIALVFSMAIGLF FGYYPANKAAKLDPIDALRYE
Sequences:
>Translated_421_residues MSLAESILLALTSLRSNKMRALLTLLGVIIGIASVIGILTIGKALQDQTLNSLESLGANDLSAQVEERPDEDSPEPDMFA FSGAANSSGNLIPEETVDTLRDRFAGSITGISVGGMGTQGTLIGDTADLKSDLLGVNEDYMWMNGVEMNYGRAITQDDVA AQRPVAVIAPDTFNTLFDANPNLALGSEVAFELNGQETFLRVIGVYKEAAAGGLVGSMPTVNTYTPYTVANDITHTEDGF NTLSIRAAQGVDQDSLKGSLQTYFDALYANNDSHHVAMLDFRKQIEEFNTILGAMSLGISAIGGISLLVGGIGVMNIMLV SVTERTREIGVRKALGARRRDIRLQFVVEAMIICFIGGILGVLLGGILGLIMSSAIGYISLPPLSGIVIALVFSMAIGLF FGYYPANKAAKLDPIDALRYE >Mature_420_residues SLAESILLALTSLRSNKMRALLTLLGVIIGIASVIGILTIGKALQDQTLNSLESLGANDLSAQVEERPDEDSPEPDMFAF SGAANSSGNLIPEETVDTLRDRFAGSITGISVGGMGTQGTLIGDTADLKSDLLGVNEDYMWMNGVEMNYGRAITQDDVAA QRPVAVIAPDTFNTLFDANPNLALGSEVAFELNGQETFLRVIGVYKEAAAGGLVGSMPTVNTYTPYTVANDITHTEDGFN TLSIRAAQGVDQDSLKGSLQTYFDALYANNDSHHVAMLDFRKQIEEFNTILGAMSLGISAIGGISLLVGGIGVMNIMLVS VTERTREIGVRKALGARRRDIRLQFVVEAMIICFIGGILGVLLGGILGLIMSSAIGYISLPPLSGIVIALVFSMAIGLFF GYYPANKAAKLDPIDALRYE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=419, Percent_Identity=31.2649164677804, Blast_Score=169, Evalue=4e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 44715; Mature: 44584
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAESILLALTSLRSNKMRALLTLLGVIIGIASVIGILTIGKALQDQTLNSLESLGAND CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LSAQVEERPDEDSPEPDMFAFSGAANSSGNLIPEETVDTLRDRFAGSITGISVGGMGTQG HHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCC TLIGDTADLKSDLLGVNEDYMWMNGVEMNYGRAITQDDVAAQRPVAVIAPDTFNTLFDAN CEECCHHHHHHHHCCCCCCCEEECCEEECCCCCCCCCCHHHHCCEEEECCCCHHHHHCCC PNLALGSEVAFELNGQETFLRVIGVYKEAAAGGLVGSMPTVNTYTPYTVANDITHTEDGF CCCEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCC NTLSIRAAQGVDQDSLKGSLQTYFDALYANNDSHHVAMLDFRKQIEEFNTILGAMSLGIS CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH AIGGISLLVGGIGVMNIMLVSVTERTREIGVRKALGARRRDIRLQFVVEAMIICFIGGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GVLLGGILGLIMSSAIGYISLPPLSGIVIALVFSMAIGLFFGYYPANKAAKLDPIDALRY HHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCC E C >Mature Secondary Structure SLAESILLALTSLRSNKMRALLTLLGVIIGIASVIGILTIGKALQDQTLNSLESLGAND CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LSAQVEERPDEDSPEPDMFAFSGAANSSGNLIPEETVDTLRDRFAGSITGISVGGMGTQG HHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCC TLIGDTADLKSDLLGVNEDYMWMNGVEMNYGRAITQDDVAAQRPVAVIAPDTFNTLFDAN CEECCHHHHHHHHCCCCCCCEEECCEEECCCCCCCCCCHHHHCCEEEECCCCHHHHHCCC PNLALGSEVAFELNGQETFLRVIGVYKEAAAGGLVGSMPTVNTYTPYTVANDITHTEDGF CCCEECCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCC NTLSIRAAQGVDQDSLKGSLQTYFDALYANNDSHHVAMLDFRKQIEEFNTILGAMSLGIS CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH AIGGISLLVGGIGVMNIMLVSVTERTREIGVRKALGARRRDIRLQFVVEAMIICFIGGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GVLLGGILGLIMSSAIGYISLPPLSGIVIALVFSMAIGLFFGYYPANKAAKLDPIDALRY HHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA