| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yceA [C]
Identifier: 145296982
GI number: 145296982
Start: 3195529
End: 3196467
Strand: Reverse
Name: yceA [C]
Synonym: cgR_2881
Alternate gene names: 145296982
Gene position: 3196467-3195529 (Counterclockwise)
Preceding gene: 145296983
Following gene: 145296981
Centisome position: 96.45
GC content: 52.4
Gene sequence:
>939_bases GTGGCTACCTCAAAAATTCTTCTTTATTACGCATTCACCCCGCTCTCTGACCCTAAAGCGGTTCAGCTGTGGCAGCGTGA GCTCTGCGAGTCACTGAATCTTCGTGGCCGCATCCTGATCTCCACTCACGGCATCAATGGAACCGTGGGCGGAGATATTG ATGATTGCAAGGCGTACATTAAAAAGACCCGCGAGTACCCAGGTTTCAACCGCATGCAGTTTAAGTGGTCCGAGGGTGGC GCTGATGATTTCCCAAAGCTCAGTGTCAAAGTCCGCGATGAGATCGTTGCCTTCGGCGCTCCAGATGAGCTCAAAGTGGA TGAAAACGGCGTCGTCGGTGGCGGCGTTCACCTGAAACCACAGCAGGTCAATGAGCTTGTGGAAGCCCGTGGCGATGAAG TTGTGTTCTTTGACGGCCGCAACGCAATGGAAGCCCAGATCGGCAAGTTCAAGGACGCTGTTGTCCCTGACGTAGAAACC ACTCATGATTTCATCGCAGAAATTGAGTCCGGAAAATACGACGATCTCAAAGACAAGCCTGTGGTCACCTACTGCACCGG CGGAATTCGTTGTGAGATCCTGAGTTCACTCATGATCAACCGTGGCTTCAAAGAGGTCTACCAAATCGATGGCGGCATCG TGCGCTACGGCGAGCAGTTTGGCAACAAGGGCCTGTGGGAAGGCTCCCTCTACGTTTTCGATAAGCGCATGCATATGGAA TTCGGCGAGGATTACAAAGAGGTCGGACACTGCATCCATTGCGATACTCCCACCAACAAATTTGAGCACTGCCTCAACGA AGATGATTGCCGCGAGCTCGTGTTGATGTGCCCTGATTGCTTCGCCAATGTTGAGACCCGTCATTGCAAGCGCGAACGCT GTGCAGCAATTGCTGCGGATTTCGCTGAGCAAGGAATTGATCCGCTCGTTACTTCTTAA
Upstream 100 bases:
>100_bases CCGCCAACAAGGCAGCAAAGCTCGATCCAATTGACGCCTTGCGTTATGAGTAAAAGCCTCGTTTTTAAGGTAGCCACACA TCGCACTAGACTGAAGAACT
Downstream 100 bases:
>100_bases AAAGGGTATGGTGGCTGGGTATGAGCATCGTTAAGATCAACGCAATTTCCGTACCCGAAGGCGCTGGTGAAGAGCTTGAG AAGCGCTTCGCAGCCCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MATSKILLYYAFTPLSDPKAVQLWQRELCESLNLRGRILISTHGINGTVGGDIDDCKAYIKKTREYPGFNRMQFKWSEGG ADDFPKLSVKVRDEIVAFGAPDELKVDENGVVGGGVHLKPQQVNELVEARGDEVVFFDGRNAMEAQIGKFKDAVVPDVET THDFIAEIESGKYDDLKDKPVVTYCTGGIRCEILSSLMINRGFKEVYQIDGGIVRYGEQFGNKGLWEGSLYVFDKRMHME FGEDYKEVGHCIHCDTPTNKFEHCLNEDDCRELVLMCPDCFANVETRHCKRERCAAIAADFAEQGIDPLVTS
Sequences:
>Translated_312_residues MATSKILLYYAFTPLSDPKAVQLWQRELCESLNLRGRILISTHGINGTVGGDIDDCKAYIKKTREYPGFNRMQFKWSEGG ADDFPKLSVKVRDEIVAFGAPDELKVDENGVVGGGVHLKPQQVNELVEARGDEVVFFDGRNAMEAQIGKFKDAVVPDVET THDFIAEIESGKYDDLKDKPVVTYCTGGIRCEILSSLMINRGFKEVYQIDGGIVRYGEQFGNKGLWEGSLYVFDKRMHME FGEDYKEVGHCIHCDTPTNKFEHCLNEDDCRELVLMCPDCFANVETRHCKRERCAAIAADFAEQGIDPLVTS >Mature_311_residues ATSKILLYYAFTPLSDPKAVQLWQRELCESLNLRGRILISTHGINGTVGGDIDDCKAYIKKTREYPGFNRMQFKWSEGGA DDFPKLSVKVRDEIVAFGAPDELKVDENGVVGGGVHLKPQQVNELVEARGDEVVFFDGRNAMEAQIGKFKDAVVPDVETT HDFIAEIESGKYDDLKDKPVVTYCTGGIRCEILSSLMINRGFKEVYQIDGGIVRYGEQFGNKGLWEGSLYVFDKRMHMEF GEDYKEVGHCIHCDTPTNKFEHCLNEDDCRELVLMCPDCFANVETRHCKRERCAAIAADFAEQGIDPLVTS
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain
Homologues:
Organism=Homo sapiens, GI111038120, Length=289, Percent_Identity=35.2941176470588, Blast_Score=172, Evalue=4e-43, Organism=Escherichia coli, GI1787294, Length=278, Percent_Identity=30.2158273381295, Blast_Score=124, Evalue=7e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2881_CORGB (A4QI35)
Other databases:
- EMBL: AP009044 - RefSeq: YP_001139803.1 - ProteinModelPortal: A4QI35 - STRING: A4QI35 - GeneID: 4994330 - GenomeReviews: AP009044_GR - KEGG: cgt:cgR_2881 - eggNOG: COG1054 - HOGENOM: HBG366219 - OMA: ARNDYEY - ProtClustDB: PRK00142 - HAMAP: MF_00469 - InterPro: IPR001763 - InterPro: IPR020936 - Gene3D: G3DSA:3.40.250.10 - SMART: SM00450
Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like
EC number: NA
Molecular weight: Translated: 35060; Mature: 34929
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS50206 RHODANESE_3
Important sites: ACT_SITE 185-185
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSKILLYYAFTPLSDPKAVQLWQRELCESLNLRGRILISTHGINGTVGGDIDDCKAYI CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHH KKTREYPGFNRMQFKWSEGGADDFPKLSVKVRDEIVAFGAPDELKVDENGVVGGGVHLKP HHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCEEECCCCEEECCEEECH QQVNELVEARGDEVVFFDGRNAMEAQIGKFKDAVVPDVETTHDFIAEIESGKYDDLKDKP HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCC VVTYCTGGIRCEILSSLMINRGFKEVYQIDGGIVRYGEQFGNKGLWEGSLYVFDKRMHME EEEEECCCCHHHHHHHHHHHCCHHHHHHHCCCCEEHHHHHCCCCCCCCEEEEEECHHHHH FGEDYKEVGHCIHCDTPTNKFEHCLNEDDCRELVLMCPDCFANVETRHCKRERCAAIAAD CCCCHHHHCCEEECCCCCHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHH FAEQGIDPLVTS HHHCCCCCCCCC >Mature Secondary Structure ATSKILLYYAFTPLSDPKAVQLWQRELCESLNLRGRILISTHGINGTVGGDIDDCKAYI CCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHH KKTREYPGFNRMQFKWSEGGADDFPKLSVKVRDEIVAFGAPDELKVDENGVVGGGVHLKP HHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCEEECCCCEEECCEEECH QQVNELVEARGDEVVFFDGRNAMEAQIGKFKDAVVPDVETTHDFIAEIESGKYDDLKDKP HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCC VVTYCTGGIRCEILSSLMINRGFKEVYQIDGGIVRYGEQFGNKGLWEGSLYVFDKRMHME EEEEECCCCHHHHHHHHHHHCCHHHHHHHCCCCEEHHHHHCCCCCCCCEEEEEECHHHHH FGEDYKEVGHCIHCDTPTNKFEHCLNEDDCRELVLMCPDCFANVETRHCKRERCAAIAAD CCCCHHHHCCEEECCCCCHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHH FAEQGIDPLVTS HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA