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The map label for this gene is yhfR [C]

Identifier: 145296959

GI number: 145296959

Start: 3177750

End: 3178115

Strand: Reverse

Name: yhfR [C]

Synonym: cgR_2859

Alternate gene names: 145296959

Gene position: 3178115-3177750 (Counterclockwise)

Preceding gene: 145296961

Following gene: 145296957

Centisome position: 95.89

GC content: 55.19

Gene sequence:

>366_bases
GTGACCGCGCCTCTGTATAAACAGATCGCTTCTTTGATTGAGGACTCCATCGTTGACGGAACCTTGAGCGTTGATCAACG
CGTGCCTTCTACTAATGAACTAGCCGCGTTCCATCGCATTAATCCCGCCACTGCGCGCAATGGCCTCAACCTGCTTGTCG
AAGCCGGCATCCTCTATAAGAAGCGTGGCATTGGCATGTTCGTCAGCGCCCAGGCCCCAGCACTCATCCGAGAGCGGCGA
GATGCCGCCTTCGCAGCTACTTATGTAGCACCGCTTATCGACGAATCCATCCACCTTGGTTTCACTCGTGCGCGCATTCA
CGCCCTTTTAGACCAGGTCGCTGAAAGTAGGGGCCTGTACAAGTAG

Upstream 100 bases:

>100_bases
ACACTTGGTATTACCCGAAAGTAATGTCGTTAATACTGTTTTTAATGACTATAAAGAGGCATAGGGTTAGTTATATGAGT
AACCAACCATCGGGATCGTC

Downstream 100 bases:

>100_bases
CGCTTAAACCCTCTTGACCTGGGGAGTTGCGGACTGTTGGGCGGGTGTGTAAATTAATTCCAGTCAGCGCGACCAACAAC
GCCCCAACACACCAGCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Regulatory Protein GntR HTH; Transcription Regulator

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MTAPLYKQIASLIEDSIVDGTLSVDQRVPSTNELAAFHRINPATARNGLNLLVEAGILYKKRGIGMFVSAQAPALIRERR
DAAFAATYVAPLIDESIHLGFTRARIHALLDQVAESRGLYK

Sequences:

>Translated_121_residues
MTAPLYKQIASLIEDSIVDGTLSVDQRVPSTNELAAFHRINPATARNGLNLLVEAGILYKKRGIGMFVSAQAPALIRERR
DAAFAATYVAPLIDESIHLGFTRARIHALLDQVAESRGLYK
>Mature_120_residues
TAPLYKQIASLIEDSIVDGTLSVDQRVPSTNELAAFHRINPATARNGLNLLVEAGILYKKRGIGMFVSAQAPALIRERRD
AAFAATYVAPLIDESIHLGFTRARIHALLDQVAESRGLYK

Specific function: Unknown

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13232; Mature: 13101

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPLYKQIASLIEDSIVDGTLSVDQRVPSTNELAAFHRINPATARNGLNLLVEAGILYK
CCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHCCCCHHHHCCHHHHHHHCHHEE
KRGIGMFVSAQAPALIRERRDAAFAATYVAPLIDESIHLGFTRARIHALLDQVAESRGLY
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCC
K
C
>Mature Secondary Structure 
TAPLYKQIASLIEDSIVDGTLSVDQRVPSTNELAAFHRINPATARNGLNLLVEAGILYK
CCHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHCCCCHHHHCCHHHHHHHCHHEE
KRGIGMFVSAQAPALIRERRDAAFAATYVAPLIDESIHLGFTRARIHALLDQVAESRGLY
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA