| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296957
Identifier: 145296957
GI number: 145296957
Start: 3169812
End: 3170807
Strand: Reverse
Name: 145296957
Synonym: cgR_2857
Alternate gene names: NA
Gene position: 3170807-3169812 (Counterclockwise)
Preceding gene: 145296959
Following gene: 145296954
Centisome position: 95.67
GC content: 47.49
Gene sequence:
>996_bases ATGTATGGGCCTTCATGTGTTTCCGTGTGCGAGATGGCAAAGCAGGAGCTGAATTCCACCAAAGGAATTGGTGGTAGAGA AGTCGAATTGGTTTATATCGATGGTGGACGTGAACCCCGTGAAGTAGCTCAAGAAGTACAAGGTCTGGTGCGTACTGGAG CTATAGATGCTGTGACTGGCTGGCATATTTCATCAATTAGAAAACTGCTGGCTCCGATGCTTCGTGGAAAAGTTCCCTAC GTTTACACGTCACTTTTTGAAGGTGATGAGGTAACTCCAGGTGTTTATTGCAGCGGTGAGAATCCTGAGCAGCAAGTCTT TCCTGCACTGAAGTGGTTGAGAGATCATCAAGGATGTCGACGTTGGTACGTCATTGGTGCTCAGTATGAATGGCCTTTGA GGTCATTTGAGAAGATTGTGTCTATGTCTTCACTGCTTGGCATAGATATTGTGGGTAGCTCTTTCATAAAAATGGGAGAA GGCGCAGCTCCACAGCTTCCTGGCGAAGTTGCCGCCAGTGGTTGCGATGGTGTGTTGATGCTTTTGGTTGGGCAGGACGC AGTCGATTTCAACAGAAACTTTGCTGAAGCCGGGCTTTCCGAGAAAATCACCAGGTACAGCCCGCTGATGGAAGAGAATA TGTTGTTAGCAAGTGGCTACGAAGCCACCGACAATCTCTTTTCCTCAGCTTCATACTTCCGGAGCTTAACCAGCCCCGAA GCTCTTGATTTTGTAGGTAGGTATTCAAAGACCGCCGGCGTAACTGCCCCTGCGCTGAACAATATGGCGCAGTCTTGTTA TCAAGGTATTTATACCCTTGCACATCTGGCTCAACGTTCTCGTGGCTTAACAGTCGAAGGATTCAACAGCATCATCGATG GTCTGACTTTCGAAGGGCCACGCGGAATTATTCGGTTTGAAGGTAACCAAGCAGTGCAGACTGTTAATTTAGCTCGAGCT GATGGTTTTGATTTCCATGTAATAGAGACCTTGTGA
Upstream 100 bases:
>100_bases CATAAACCTTGGCGGAGCAGGCAACATGGAACTTTTGGGATTCAAACATGTTGGGCCATATCGAATAGGCATTGTAGTTC CTTTGCAGGGAACCGGTGGT
Downstream 100 bases:
>100_bases GCTATCAAATTAAAGTAGCGGCGAGAGGTAGGAGAATAGCAAAAGGAAAAAGTGTCATTCCGCAGAGGATGATTGGCCGC CAAGGGATATTGAATCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Regulatory Protein; Nitrile Hydratase Regulator; Transcriptional Regulator; Aliphatic Amidase Expression-Regulating Protein AmiC; Twin-Arginine Translocation Pathway Signal; ABC-Type Branched-Chain Amino Acid Transporter; Regulator; ABC Transporter; Amino Acid ABC Transporter; Transducer Protein Htr; Amidase Expression-Regulating Protein; Aliphatic Amidase Expression-Regulating; Signal Peptide; Negative Aliphatic Amidase Regulator; Aliphatic Amidase Regulator; Tat Pathway Signal Sequence Domain Protein; PAS Fold Family; ABC Transporter Periplasmic Protein; PAS/PAC Sensor Protein; Urea Or Short-Chain Amide ABC Transporter; Branched-Chain Amino Acid ABC Transporter; ATPase Histidine Kinase- DNA Gyrase B- And; Chain B Amide Receptor Of Amidase Operon
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MYGPSCVSVCEMAKQELNSTKGIGGREVELVYIDGGREPREVAQEVQGLVRTGAIDAVTGWHISSIRKLLAPMLRGKVPY VYTSLFEGDEVTPGVYCSGENPEQQVFPALKWLRDHQGCRRWYVIGAQYEWPLRSFEKIVSMSSLLGIDIVGSSFIKMGE GAAPQLPGEVAASGCDGVLMLLVGQDAVDFNRNFAEAGLSEKITRYSPLMEENMLLASGYEATDNLFSSASYFRSLTSPE ALDFVGRYSKTAGVTAPALNNMAQSCYQGIYTLAHLAQRSRGLTVEGFNSIIDGLTFEGPRGIIRFEGNQAVQTVNLARA DGFDFHVIETL
Sequences:
>Translated_331_residues MYGPSCVSVCEMAKQELNSTKGIGGREVELVYIDGGREPREVAQEVQGLVRTGAIDAVTGWHISSIRKLLAPMLRGKVPY VYTSLFEGDEVTPGVYCSGENPEQQVFPALKWLRDHQGCRRWYVIGAQYEWPLRSFEKIVSMSSLLGIDIVGSSFIKMGE GAAPQLPGEVAASGCDGVLMLLVGQDAVDFNRNFAEAGLSEKITRYSPLMEENMLLASGYEATDNLFSSASYFRSLTSPE ALDFVGRYSKTAGVTAPALNNMAQSCYQGIYTLAHLAQRSRGLTVEGFNSIIDGLTFEGPRGIIRFEGNQAVQTVNLARA DGFDFHVIETL >Mature_331_residues MYGPSCVSVCEMAKQELNSTKGIGGREVELVYIDGGREPREVAQEVQGLVRTGAIDAVTGWHISSIRKLLAPMLRGKVPY VYTSLFEGDEVTPGVYCSGENPEQQVFPALKWLRDHQGCRRWYVIGAQYEWPLRSFEKIVSMSSLLGIDIVGSSFIKMGE GAAPQLPGEVAASGCDGVLMLLVGQDAVDFNRNFAEAGLSEKITRYSPLMEENMLLASGYEATDNLFSSASYFRSLTSPE ALDFVGRYSKTAGVTAPALNNMAQSCYQGIYTLAHLAQRSRGLTVEGFNSIIDGLTFEGPRGIIRFEGNQAVQTVNLARA DGFDFHVIETL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36139; Mature: 36139
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGPSCVSVCEMAKQELNSTKGIGGREVELVYIDGGREPREVAQEVQGLVRTGAIDAVTG CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHCC WHISSIRKLLAPMLRGKVPYVYTSLFEGDEVTPGVYCSGENPEQQVFPALKWLRDHQGCR CCHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCC RWYVIGAQYEWPLRSFEKIVSMSSLLGIDIVGSSFIKMGEGAAPQLPGEVAASGCDGVLM EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHCCCCCEEE LLVGQDAVDFNRNFAEAGLSEKITRYSPLMEENMLLASGYEATDNLFSSASYFRSLTSPE EEECCCCHHHCCCHHHCCHHHHHHHHCCHHHHCEEEECCCCHHHHHHHHHHHHHHCCCCH ALDFVGRYSKTAGVTAPALNNMAQSCYQGIYTLAHLAQRSRGLTVEGFNSIIDGLTFEGP HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHCCCCCCCC RGIIRFEGNQAVQTVNLARADGFDFHVIETL CCEEEECCCCCEEEEEHHHCCCCCEEEEECC >Mature Secondary Structure MYGPSCVSVCEMAKQELNSTKGIGGREVELVYIDGGREPREVAQEVQGLVRTGAIDAVTG CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHCC WHISSIRKLLAPMLRGKVPYVYTSLFEGDEVTPGVYCSGENPEQQVFPALKWLRDHQGCR CCHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCC RWYVIGAQYEWPLRSFEKIVSMSSLLGIDIVGSSFIKMGEGAAPQLPGEVAASGCDGVLM EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHCCCCCEEE LLVGQDAVDFNRNFAEAGLSEKITRYSPLMEENMLLASGYEATDNLFSSASYFRSLTSPE EEECCCCHHHCCCHHHCCHHHHHHHHCCHHHHCEEEECCCCHHHHHHHHHHHHHHCCCCH ALDFVGRYSKTAGVTAPALNNMAQSCYQGIYTLAHLAQRSRGLTVEGFNSIIDGLTFEGP HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHCCCCCCCC RGIIRFEGNQAVQTVNLARADGFDFHVIETL CCEEEECCCCCEEEEEHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA