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The map label for this gene is ynfM [H]

Identifier: 145296933

GI number: 145296933

Start: 3147077

End: 3148315

Strand: Direct

Name: ynfM [H]

Synonym: cgR_2833

Alternate gene names: 145296933

Gene position: 3147077-3148315 (Clockwise)

Preceding gene: 145296931

Following gene: 145296934

Centisome position: 94.96

GC content: 52.02

Gene sequence:

>1239_bases
ATGAACTCCATGAGCCAAGCAATAGATAGCAAGGTCGAGGCACACGAAGGTTACAAAGGCATCGAGCGAGGAACACGCAA
TTACAAGCGCGCTGTGTTTGCGATGCTGGCCGCCGGTCTTGCTGCTTTCAATGGTCTTTATTGCACGCAGGCATTGCTTC
CCACCATGACGGAAGAGTTGGGAATTACGCCCACTGAGTCCGCGCTGACGGTGTCGGCGACGACTGGAATGTTGGCGCTG
TGTATTGTTCCGGCGTCGATACTTTCGGAGAAATTTGGTCGCGGTCGGGTGCTGACAATTTCACTCACGTTGGCCATCAT
CGTGNGATTAATTTTGCCGCTTGTCCCCAATATCACTGCTCTCATCCTGCTCAGAGGTCTCCAAGGTGCGCTGCTTGCTG
GCACTCCGGCGGTGGCGATGACCTGGTTGTCTGAGGAAATTCACCCCAAAGATATTGGGCACGCGATGGGGATTTACATC
GCGGGAAATACTGTCGGCGGACTCACTGGACGCATGATTCCGGCGGGACTACTTGAAGTAACTCATTGGCAAAACGCGCT
GCTGGGAAGTTCTATCGCTGCGCTAATCTTCGGCGTAATCATGGTGGTATTGCTTCCCAAACAGCGGAAATTCCAGCCGA
AGAATATCAATCTGGGCCATGAGGTTTCTGCGATGGCTGCTCATTGGCGGAATCCTCGTTTGGCTTTGCTCTTTGGTACT
GCATTTTTGGGCATGGGTACTTTTGTGTCGCTGTACAACTATTTGGGTTTCCGCATGATTGATCAGTTTGGGCTGAGTGA
AGTGCTGGTTGGTGCAGTGTTCATCATGTATCTGGCCGGGACTTGGAGCTCAACCCAGGCGGGTGCGTTGAGGGAGAAGA
TTGGCAATGGACAAACTGTCATTTTCTTGAGCCTGATGATGATCGCCTCGATGGCTCTCATGGGCATTAACAATTTGTGG
ATCACCCTCATCGCGCTTTTTGTGTTCACAGCAGCGTTTTTCGCACTGCATTCCAGTGCTTCGGGATGGATCGGAATCAT
CGCAACGAAGGATCGCGCGGAAGCCTCCAGCATGTACTTGTTCTGTTATTACGTGGGATCCTCGGTGATTGGTTGGGTTT
CTGGATTCGCGTTTACGCATTTGCCGTGGTTGGCGTTCATTGGCTGGTTGATTCTGCTTCTTTTTGGAGTGCTGGCGATT
TGTGTGACGCTGGCAAGGCTTGCCCGCAACGCCAATTAA

Upstream 100 bases:

>100_bases
ATGTCTCCGCCGTCGTTGTCCATGGTCACAGCCTACATGCGCAAAGTGAATCAAAAACAGCTATTTCTAACATTTTACTA
ATATTTGCTGTTGGCGCATG

Downstream 100 bases:

>100_bases
TACGAGTTTGTCCGTGTTTAAATCGGCGCTATTGTGGAACCCATGAGAAGCGATTCCACATGGAGCAGTCGGACTTGGCA
CAGAAAAGCTAGTAGACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MNSMSQAIDSKVEAHEGYKGIERGTRNYKRAVFAMLAAGLAAFNGLYCTQALLPTMTEELGITPTESALTVSATTGMLAL
CIVPASILSEKFGRGRVLTISLTLAIIVXLILPLVPNITALILLRGLQGALLAGTPAVAMTWLSEEIHPKDIGHAMGIYI
AGNTVGGLTGRMIPAGLLEVTHWQNALLGSSIAALIFGVIMVVLLPKQRKFQPKNINLGHEVSAMAAHWRNPRLALLFGT
AFLGMGTFVSLYNYLGFRMIDQFGLSEVLVGAVFIMYLAGTWSSTQAGALREKIGNGQTVIFLSLMMIASMALMGINNLW
ITLIALFVFTAAFFALHSSASGWIGIIATKDRAEASSMYLFCYYVGSSVIGWVSGFAFTHLPWLAFIGWLILLLFGVLAI
CVTLARLARNAN

Sequences:

>Translated_412_residues
MNSMSQAIDSKVEAHEGYKGIERGTRNYKRAVFAMLAAGLAAFNGLYCTQALLPTMTEELGITPTESALTVSATTGMLAL
CIVPASILSEKFGRGRVLTISLTLAIIVXLILPLVPNITALILLRGLQGALLAGTPAVAMTWLSEEIHPKDIGHAMGIYI
AGNTVGGLTGRMIPAGLLEVTHWQNALLGSSIAALIFGVIMVVLLPKQRKFQPKNINLGHEVSAMAAHWRNPRLALLFGT
AFLGMGTFVSLYNYLGFRMIDQFGLSEVLVGAVFIMYLAGTWSSTQAGALREKIGNGQTVIFLSLMMIASMALMGINNLW
ITLIALFVFTAAFFALHSSASGWIGIIATKDRAEASSMYLFCYYVGSSVIGWVSGFAFTHLPWLAFIGWLILLLFGVLAI
CVTLARLARNAN
>Mature_412_residues
MNSMSQAIDSKVEAHEGYKGIERGTRNYKRAVFAMLAAGLAAFNGLYCTQALLPTMTEELGITPTESALTVSATTGMLAL
CIVPASILSEKFGRGRVLTISLTLAIIVXLILPLVPNITALILLRGLQGALLAGTPAVAMTWLSEEIHPKDIGHAMGIYI
AGNTVGGLTGRMIPAGLLEVTHWQNALLGSSIAALIFGVIMVVLLPKQRKFQPKNINLGHEVSAMAAHWRNPRLALLFGT
AFLGMGTFVSLYNYLGFRMIDQFGLSEVLVGAVFIMYLAGTWSSTQAGALREKIGNGQTVIFLSLMMIASMALMGINNLW
ITLIALFVFTAAFFALHSSASGWIGIIATKDRAEASSMYLFCYYVGSSVIGWVSGFAFTHLPWLAFIGWLILLLFGVLAI
CVTLARLARNAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=398, Percent_Identity=36.1809045226131, Blast_Score=263, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44213; Mature: 44213

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSMSQAIDSKVEAHEGYKGIERGTRNYKRAVFAMLAAGLAAFNGLYCTQALLPTMTEEL
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GITPTESALTVSATTGMLALCIVPASILSEKFGRGRVLTISLTLAIIVXLILPLVPNITA
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCHHHH
LILLRGLQGALLAGTPAVAMTWLSEEIHPKDIGHAMGIYIAGNTVGGLTGRMIPAGLLEV
HHHHHHCCCCHHCCCHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHH
THWQNALLGSSIAALIFGVIMVVLLPKQRKFQPKNINLGHEVSAMAAHWRNPRLALLFGT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEHHH
AFLGMGTFVSLYNYLGFRMIDQFGLSEVLVGAVFIMYLAGTWSSTQAGALREKIGNGQTV
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHH
IFLSLMMIASMALMGINNLWITLIALFVFTAAFFALHSSASGWIGIIATKDRAEASSMYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHEE
FCYYVGSSVIGWVSGFAFTHLPWLAFIGWLILLLFGVLAICVTLARLARNAN
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSMSQAIDSKVEAHEGYKGIERGTRNYKRAVFAMLAAGLAAFNGLYCTQALLPTMTEEL
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GITPTESALTVSATTGMLALCIVPASILSEKFGRGRVLTISLTLAIIVXLILPLVPNITA
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCHHHH
LILLRGLQGALLAGTPAVAMTWLSEEIHPKDIGHAMGIYIAGNTVGGLTGRMIPAGLLEV
HHHHHHCCCCHHCCCHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHH
THWQNALLGSSIAALIFGVIMVVLLPKQRKFQPKNINLGHEVSAMAAHWRNPRLALLFGT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEHHH
AFLGMGTFVSLYNYLGFRMIDQFGLSEVLVGAVFIMYLAGTWSSTQAGALREKIGNGQTV
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHH
IFLSLMMIASMALMGINNLWITLIALFVFTAAFFALHSSASGWIGIIATKDRAEASSMYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHEE
FCYYVGSSVIGWVSGFAFTHLPWLAFIGWLILLLFGVLAICVTLARLARNAN
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]