| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yxeH [H]
Identifier: 145296879
GI number: 145296879
Start: 3086100
End: 3086936
Strand: Reverse
Name: yxeH [H]
Synonym: cgR_2779
Alternate gene names: 145296879
Gene position: 3086936-3086100 (Counterclockwise)
Preceding gene: 145296880
Following gene: 145296878
Centisome position: 93.14
GC content: 58.18
Gene sequence:
>837_bases ATGATTGCACTGGGTTCAGCGCCCAAGCTGGTTGCCTCCGATGTTGATGGCACCCTCATCAATAGTTCTGAGCGCGTGCC GCAACGCCTGCGCGATGTGATCACGCGGATGACCAATCAGGGCGTGACCCTGGCGCTGTCCACGGGCCGCCCGCCGCGCT GGATTCATTATGTGCTGGATCAGCTGAGCGTGAAGCCGATTTGCGTCTGCGCGAATGGCGCGGTGCTGTACGATTCCGCT GCCGATGAGATTCTTGCAGCTCAGACGCTTAGTCCGGAGGTTATGGCGAGTGCCGTCATGGCTGCGCGTGCCGCTTTGGA AGAGCATGGCGGGGTCAGTATTGCTGTCGAGCGTGCTGGAAAATCCGCTTACGATCCAGCCGATGAGCTGTTTTTGGTCA CCCCGGAATACAGCCACGCGTGGCCCTCAAATGATCACGGCACCTTCGAGGAAGCCGAAGTGCTTTCCGAACCAGCCACC AAATTGTTGATGCGCAGCGATTACCTCGATTCCAAGCAGCTTTTTGATATCGTCCGCGCTTCCGTTCCCGAGGATCAAGT CCACGTCACCTTCTCCATGTCCGGCGGACTCATTGAGATCGCAGCGCCCGGCGTGACCAAGGCACTGGGCGTATCGATGC TGGCAGAGCGCCTAAAGATTGAGCAAAAGGACGTTATAACGTTCGGTGACATGCCCAACGATATTGAAATGCTCCAATGG GCCGGCCGGGGAGTGGCGATGGGCAACGCCCGACCAGAGGTCAAAGCAGTATCCGACCACATCACCCGCACCAACGACGA CGCCGGTGTAGCAGATGTATTGGAGTGGTGGTTCTAG
Upstream 100 bases:
>100_bases CGAAAATGTTGGAAATCGCCGAACGGGAACGTCGACAAGCAAAACGCGCGGCAAAGGCCGCCAAGAAACGCACCACCTTT ATAAGGAAAATCTTTAAAAA
Downstream 100 bases:
>100_bases AAGGTAGTTGTAAAACACTGCTTGGCGGATCAATACGTGCAAAAATAGGGCCATGAGAATCTCAAAGGCCAATGCGTATG TTGCAGCGATTGACCAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MIALGSAPKLVASDVDGTLINSSERVPQRLRDVITRMTNQGVTLALSTGRPPRWIHYVLDQLSVKPICVCANGAVLYDSA ADEILAAQTLSPEVMASAVMAARAALEEHGGVSIAVERAGKSAYDPADELFLVTPEYSHAWPSNDHGTFEEAEVLSEPAT KLLMRSDYLDSKQLFDIVRASVPEDQVHVTFSMSGGLIEIAAPGVTKALGVSMLAERLKIEQKDVITFGDMPNDIEMLQW AGRGVAMGNARPEVKAVSDHITRTNDDAGVADVLEWWF
Sequences:
>Translated_278_residues MIALGSAPKLVASDVDGTLINSSERVPQRLRDVITRMTNQGVTLALSTGRPPRWIHYVLDQLSVKPICVCANGAVLYDSA ADEILAAQTLSPEVMASAVMAARAALEEHGGVSIAVERAGKSAYDPADELFLVTPEYSHAWPSNDHGTFEEAEVLSEPAT KLLMRSDYLDSKQLFDIVRASVPEDQVHVTFSMSGGLIEIAAPGVTKALGVSMLAERLKIEQKDVITFGDMPNDIEMLQW AGRGVAMGNARPEVKAVSDHITRTNDDAGVADVLEWWF >Mature_278_residues MIALGSAPKLVASDVDGTLINSSERVPQRLRDVITRMTNQGVTLALSTGRPPRWIHYVLDQLSVKPICVCANGAVLYDSA ADEILAAQTLSPEVMASAVMAARAALEEHGGVSIAVERAGKSAYDPADELFLVTPEYSHAWPSNDHGTFEEAEVLSEPAT KLLMRSDYLDSKQLFDIVRASVPEDQVHVTFSMSGGLIEIAAPGVTKALGVSMLAERLKIEQKDVITFGDMPNDIEMLQW AGRGVAMGNARPEVKAVSDHITRTNDDAGVADVLEWWF
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI2367265, Length=276, Percent_Identity=28.9855072463768, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1786982, Length=278, Percent_Identity=26.2589928057554, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1787043, Length=269, Percent_Identity=23.0483271375465, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 - InterPro: IPR006380 [H]
Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]
EC number: NA
Molecular weight: Translated: 30045; Mature: 30045
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIALGSAPKLVASDVDGTLINSSERVPQRLRDVITRMTNQGVTLALSTGRPPRWIHYVLD CCCCCCCCCHHHCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH QLSVKPICVCANGAVLYDSAADEILAAQTLSPEVMASAVMAARAALEEHGGVSIAVERAG HCCCCEEEEECCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC KSAYDPADELFLVTPEYSHAWPSNDHGTFEEAEVLSEPATKLLMRSDYLDSKQLFDIVRA CCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SVPEDQVHVTFSMSGGLIEIAAPGVTKALGVSMLAERLKIEQKDVITFGDMPNDIEMLQW CCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHCCCHHCEEEECCCCCHHHHHHH AGRGVAMGNARPEVKAVSDHITRTNDDAGVADVLEWWF CCCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHCC >Mature Secondary Structure MIALGSAPKLVASDVDGTLINSSERVPQRLRDVITRMTNQGVTLALSTGRPPRWIHYVLD CCCCCCCCCHHHCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH QLSVKPICVCANGAVLYDSAADEILAAQTLSPEVMASAVMAARAALEEHGGVSIAVERAG HCCCCEEEEECCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC KSAYDPADELFLVTPEYSHAWPSNDHGTFEEAEVLSEPATKLLMRSDYLDSKQLFDIVRA CCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SVPEDQVHVTFSMSGGLIEIAAPGVTKALGVSMLAERLKIEQKDVITFGDMPNDIEMLQW CCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHCCCHHCEEEECCCCCHHHHHHH AGRGVAMGNARPEVKAVSDHITRTNDDAGVADVLEWWF CCCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]