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The map label for this gene is rfbD [H]

Identifier: 145296876

GI number: 145296876

Start: 3080862

End: 3082067

Strand: Reverse

Name: rfbD [H]

Synonym: cgR_2776

Alternate gene names: 145296876

Gene position: 3082067-3080862 (Counterclockwise)

Preceding gene: 145296878

Following gene: 145296874

Centisome position: 93.0

GC content: 55.06

Gene sequence:

>1206_bases
ATGACGGAATCGAAAAATTACGACTTAATCGTTGTAGGCTCCGGCCTCTTCGGGCTCACCGTGGCTGAGCGTGCAGCTAG
CCAGCTGGGTAAGAAAGTCCTCATCGTTGAACGCCGCTCGCACCTCGGTGGCAATGCTTACTCTGAAGCAGAACCAGAGA
CCGGCATTGAAATCCACAAATACGGCGCGCACCTCTTCCACACCTCCAACACACGCGTGTGGGAATACGTCAACCAGTTC
ACCAGTTTCACCGGCTACCAGCACCGCGTCTTCGCAATGCACAACGGCACCGCCTACCAATTCCCCATGGGACTGGGCCT
GATTAACCAGTTCTTCGGCAAGTACTACAGCCCAGATGAAGCCCGTGAGCTCATCAAGGAACAGTCTGCAGAAATCGATT
CCTCCGACGCCACCAACCTCGAAGAAAAGGCCATTTCCCTCATTGGTCGCCCACTTTACGAGGCATTCATCCGCGACTAC
ACCGCAAAGCAGTGGCAGACTGATCCAAAGAACCTCCCAGCCGGCAACATCACCCGCCTGCCAGTTCGCTACAACTTCAA
CAACCGCTATTTCAACGACACCTACGAAGGCCTTCCCACAGACGGCTACGCGGCATGGTTGGAAAAGATGGCAGAGCATG
AGCTTATCGACGTCCTCCTCGACACCGACTGGTTCGACGTTCGCGATGACCTCCGCGCAAGCAACCCCGACGCACCTGTG
GTCTACACCGGCCCACTCGACCTCTACTTCAACTACGCAGAGGGCAAGCTGGGATGGCGCACCCTCGACTTTGAAACCGA
AGTAGTAGAAACCGGTGACTTCCAAGGAACCCCAGTGATGAACTACAACGATGCGGACGTACCTTTCACCCGCATCCACG
AGTTCCGTCACTTCCACCCAGAGCGTGATGAGAGGTACCCAAAGGACAAGACCGTCATCATGCGTGAGTTCTCCCGTTTC
GCAGATAACGAGGATGAGCCTTATTACCCAATCAACACTCCAGATGACCGGGATATGCTGAAGCAGTACCGCCTTCTGGC
TGCTGAAGAGGCTGCTAATAATAAGGTGCTGTTCGGCGGTCGACTGGGCACGTACCAGTACCTCGACATGCACATGGCTA
TCGGTTCTGCGCTGAGCATGTTTGACAACAAGCTGGTGCCCTTCTTTGAAGAAGGCACACCGCTAGAGCAGGAACGCGGA
CACTAA

Upstream 100 bases:

>100_bases
AAGGTATCTGGGTGTGGATATGCCCTGCTAACTGGAGAAACTTGGCCCGATCGGGTGTCTGAAATTTCGGCAACGCCGAA
TGTAAGTTAGTGTCGAATGC

Downstream 100 bases:

>100_bases
AAGGAAGGGCATCTCCCACATAGCGGAGATGCCCTTTTCTTTGTATCTACTTGCTGTACACCGGAGTGTTCATACCTTCG
TAGCGCGCCTTCAACTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MTESKNYDLIVVGSGLFGLTVAERAASQLGKKVLIVERRSHLGGNAYSEAEPETGIEIHKYGAHLFHTSNTRVWEYVNQF
TSFTGYQHRVFAMHNGTAYQFPMGLGLINQFFGKYYSPDEARELIKEQSAEIDSSDATNLEEKAISLIGRPLYEAFIRDY
TAKQWQTDPKNLPAGNITRLPVRYNFNNRYFNDTYEGLPTDGYAAWLEKMAEHELIDVLLDTDWFDVRDDLRASNPDAPV
VYTGPLDLYFNYAEGKLGWRTLDFETEVVETGDFQGTPVMNYNDADVPFTRIHEFRHFHPERDERYPKDKTVIMREFSRF
ADNEDEPYYPINTPDDRDMLKQYRLLAAEEAANNKVLFGGRLGTYQYLDMHMAIGSALSMFDNKLVPFFEEGTPLEQERG
H

Sequences:

>Translated_401_residues
MTESKNYDLIVVGSGLFGLTVAERAASQLGKKVLIVERRSHLGGNAYSEAEPETGIEIHKYGAHLFHTSNTRVWEYVNQF
TSFTGYQHRVFAMHNGTAYQFPMGLGLINQFFGKYYSPDEARELIKEQSAEIDSSDATNLEEKAISLIGRPLYEAFIRDY
TAKQWQTDPKNLPAGNITRLPVRYNFNNRYFNDTYEGLPTDGYAAWLEKMAEHELIDVLLDTDWFDVRDDLRASNPDAPV
VYTGPLDLYFNYAEGKLGWRTLDFETEVVETGDFQGTPVMNYNDADVPFTRIHEFRHFHPERDERYPKDKTVIMREFSRF
ADNEDEPYYPINTPDDRDMLKQYRLLAAEEAANNKVLFGGRLGTYQYLDMHMAIGSALSMFDNKLVPFFEEGTPLEQERG
H
>Mature_400_residues
TESKNYDLIVVGSGLFGLTVAERAASQLGKKVLIVERRSHLGGNAYSEAEPETGIEIHKYGAHLFHTSNTRVWEYVNQFT
SFTGYQHRVFAMHNGTAYQFPMGLGLINQFFGKYYSPDEARELIKEQSAEIDSSDATNLEEKAISLIGRPLYEAFIRDYT
AKQWQTDPKNLPAGNITRLPVRYNFNNRYFNDTYEGLPTDGYAAWLEKMAEHELIDVLLDTDWFDVRDDLRASNPDAPVV
YTGPLDLYFNYAEGKLGWRTLDFETEVVETGDFQGTPVMNYNDADVPFTRIHEFRHFHPERDERYPKDKTVIMREFSRFA
DNEDEPYYPINTPDDRDMLKQYRLLAAEEAANNKVLFGGRLGTYQYLDMHMAIGSALSMFDNKLVPFFEEGTPLEQERGH

Specific function: Involved in the conversion of UDP-GalP into UDP-GalF through a 2-keto intermediate [H]

COG id: COG0562

COG function: function code M; UDP-galactopyranose mutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788348, Length=377, Percent_Identity=42.9708222811671, Blast_Score=306, Evalue=2e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR016040
- InterPro:   IPR004379
- InterPro:   IPR015899 [H]

Pfam domain/function: PF01593 Amino_oxidase; PF03275 GLF [H]

EC number: =5.4.99.9 [H]

Molecular weight: Translated: 46222; Mature: 46091

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESKNYDLIVVGSGLFGLTVAERAASQLGKKVLIVERRSHLGGNAYSEAEPETGIEIHK
CCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEE
YGAHLFHTSNTRVWEYVNQFTSFTGYQHRVFAMHNGTAYQFPMGLGLINQFFGKYYSPDE
CCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCEEECCHHHHHHHHHHHCCCCCHH
ARELIKEQSAEIDSSDATNLEEKAISLIGRPLYEAFIRDYTAKQWQTDPKNLPAGNITRL
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
PVRYNFNNRYFNDTYEGLPTDGYAAWLEKMAEHELIDVLLDTDWFDVRDDLRASNPDAPV
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCE
VYTGPLDLYFNYAEGKLGWRTLDFETEVVETGDFQGTPVMNYNDADVPFTRIHEFRHFHP
EEECCCEEEEEECCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
ERDERYPKDKTVIMREFSRFADNEDEPYYPINTPDDRDMLKQYRLLAAEEAANNKVLFGG
CHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC
RLGTYQYLDMHMAIGSALSMFDNKLVPFFEEGTPLEQERGH
CCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHCCCC
>Mature Secondary Structure 
TESKNYDLIVVGSGLFGLTVAERAASQLGKKVLIVERRSHLGGNAYSEAEPETGIEIHK
CCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEE
YGAHLFHTSNTRVWEYVNQFTSFTGYQHRVFAMHNGTAYQFPMGLGLINQFFGKYYSPDE
CCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCEEECCHHHHHHHHHHHCCCCCHH
ARELIKEQSAEIDSSDATNLEEKAISLIGRPLYEAFIRDYTAKQWQTDPKNLPAGNITRL
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
PVRYNFNNRYFNDTYEGLPTDGYAAWLEKMAEHELIDVLLDTDWFDVRDDLRASNPDAPV
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCE
VYTGPLDLYFNYAEGKLGWRTLDFETEVVETGDFQGTPVMNYNDADVPFTRIHEFRHFHP
EEECCCEEEEEECCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
ERDERYPKDKTVIMREFSRFADNEDEPYYPINTPDDRDMLKQYRLLAAEEAANNKVLFGG
CHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC
RLGTYQYLDMHMAIGSALSMFDNKLVPFFEEGTPLEQERGH
CCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8752339 [H]