BacMap

Definition	Corynebacterium glutamicum R chromosome, complete genome.
Accession	NC_009342
Length	3,314,179

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The map label for this gene is dnaJ2 [H]

Identifier: 145296785

GI number: 145296785

Start: 2974993

End: 2976180

Strand: Reverse

Name: dnaJ2 [H]

Synonym: cgR_2688

Alternate gene names: 145296785

Gene position: 2976180-2974993 (Counterclockwise)

Preceding gene: 145296786

Following gene: 145296784

Centisome position: 89.8

GC content: 54.97

Gene sequence:

>1188_bases
GTGAACAACAGCGAATGGGCAAATAAGAACTATTACGCAGACCTGGGGGTCTCCTCGTCCGCTTCAGAAGATGAGATCAA
AAAGGCTTACCGCAAGCTCGCCAGGGAAAATCACCCAGATAAAAATCCAGGTGACAAGGCCGCTGAAGATCGATTCAAAA
AAGCGGCCGAGGCATATGACGTACTTGGTGATGACAAGAAACGAAAAGAATACGACGAGCTCAAGGCACTTCTAGCTTCT
GGTGGAATCCGCGGAGGGTTCGGAAGCGGAGGTGCGGGATTCCCCGGCGGGTTTCGCACGTCGACGGGAGGATTCGACAC
CTCAGACCTCTTCGGAGGAGGACAAGGTGGAGGATTTTCTGCGGACGGCGGTTTGGGCGATATCTTCGGTGGCCTTTTCA
ACCGCGGCGCTGGTTCTCGCCAGTCAGCTAGGCCGACGCGGGGGGCGGATGTAGAAACCGAAATAACCCTCTCGTTTGTT
GAGGCAGCGAAAGGCACGACCATCCCAGTGGAACTCACCGGCGATGCGCCCTGCAACACCTGCCACGGATCGGGCTCCAA
ATCAGGCCACCCCGCAAAATGTGGAACCTGTGATGGAACCGGATTCACCTCTGAAAACAAGGGTGCTTTCGGATTCTCCG
CTCCATGTGCAACCTGTGGTGGCACTGGTGAAGTAATCACTGATCCTTGCGATAACTGCCACGGCCGAGGCACCGTTCGG
AAGTCTCGTTCCATCACCGTGCGTATCCCAACTGGCGTGGAAGATGGACAGAAAGTTCGTCTTGCAGGCCAAGGTGAAGC
AGGACCAAATGGCAAACCAGCGGGCGATCTCTTTGTGAAAGTCCACGTGAAAAAGGACGATGTGTTCACACGCGACGGCA
ACAACATTTTGATCACCATTCCCGTGAGCTTCAGCGAGCTGGCTTTGGGTGGTGCTATTTCTGTGCCAACGCTCAACAAG
CCTGTAAAACTGAAGCTGCCTGCGGGAACGCCAGATGGTCGTACTTTGCGTGTACGCGGTCGCGGTATCGAAACACGTGA
TTCCACTGGTGATCTGCTGGTTACAGTCCAGGTTTCTGTTCCGAAGAATCTGGATGACAACGCTGCGGAAGCGCTCCGCG
CATATGCTGAAGCAGAAACTAATTCAGGTTTTGATCCCCGCGCTAACTGGGCGGGCCAGAACCGCTAG

Upstream 100 bases:

>100_bases
ATCCGCCGGTGTCCGGACAACAAAACTTGCAACACAAGATAACTTAAGAAATTACATACAATTCACCGCATATAAGACTC
ATGGAAGGAGGGGATGCCCA

Downstream 100 bases:

>100_bases
ACGTTCTCTTTGAGAAAGGAGGTGACGAAACATGGCATCCACACCGAAAAAATCCAACGATGAAGGTCAGTTTGACCGTG
TCGATTTTCAAGGGGAAGTC

Product: chaperone protein DnaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MNNSEWANKNYYADLGVSSSASEDEIKKAYRKLARENHPDKNPGDKAAEDRFKKAAEAYDVLGDDKKRKEYDELKALLAS
GGIRGGFGSGGAGFPGGFRTSTGGFDTSDLFGGGQGGGFSADGGLGDIFGGLFNRGAGSRQSARPTRGADVETEITLSFV
EAAKGTTIPVELTGDAPCNTCHGSGSKSGHPAKCGTCDGTGFTSENKGAFGFSAPCATCGGTGEVITDPCDNCHGRGTVR
KSRSITVRIPTGVEDGQKVRLAGQGEAGPNGKPAGDLFVKVHVKKDDVFTRDGNNILITIPVSFSELALGGAISVPTLNK
PVKLKLPAGTPDGRTLRVRGRGIETRDSTGDLLVTVQVSVPKNLDDNAAEALRAYAEAETNSGFDPRANWAGQNR

Sequences:

>Translated_395_residues
MNNSEWANKNYYADLGVSSSASEDEIKKAYRKLARENHPDKNPGDKAAEDRFKKAAEAYDVLGDDKKRKEYDELKALLAS
GGIRGGFGSGGAGFPGGFRTSTGGFDTSDLFGGGQGGGFSADGGLGDIFGGLFNRGAGSRQSARPTRGADVETEITLSFV
EAAKGTTIPVELTGDAPCNTCHGSGSKSGHPAKCGTCDGTGFTSENKGAFGFSAPCATCGGTGEVITDPCDNCHGRGTVR
KSRSITVRIPTGVEDGQKVRLAGQGEAGPNGKPAGDLFVKVHVKKDDVFTRDGNNILITIPVSFSELALGGAISVPTLNK
PVKLKLPAGTPDGRTLRVRGRGIETRDSTGDLLVTVQVSVPKNLDDNAAEALRAYAEAETNSGFDPRANWAGQNR
>Mature_395_residues
MNNSEWANKNYYADLGVSSSASEDEIKKAYRKLARENHPDKNPGDKAAEDRFKKAAEAYDVLGDDKKRKEYDELKALLAS
GGIRGGFGSGGAGFPGGFRTSTGGFDTSDLFGGGQGGGFSADGGLGDIFGGLFNRGAGSRQSARPTRGADVETEITLSFV
EAAKGTTIPVELTGDAPCNTCHGSGSKSGHPAKCGTCDGTGFTSENKGAFGFSAPCATCGGTGEVITDPCDNCHGRGTVR
KSRSITVRIPTGVEDGQKVRLAGQGEAGPNGKPAGDLFVKVHVKKDDVFTRDGNNILITIPVSFSELALGGAISVPTLNK
PVKLKLPAGTPDGRTLRVRGRGIETRDSTGDLLVTVQVSVPKNLDDNAAEALRAYAEAETNSGFDPRANWAGQNR

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI205360838, Length=380, Percent_Identity=32.3684210526316, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI205360840, Length=380, Percent_Identity=32.3684210526316, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI194328760, Length=317, Percent_Identity=30.5993690851735, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI194328758, Length=317, Percent_Identity=30.5993690851735, Blast_Score=145, Evalue=9e-35,
Organism=Homo sapiens, GI4504511, Length=366, Percent_Identity=30.0546448087432, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI5031741, Length=376, Percent_Identity=29.2553191489362, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI6631085, Length=394, Percent_Identity=28.6802030456853, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI7706495, Length=373, Percent_Identity=28.686327077748, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI194328762, Length=285, Percent_Identity=26.6666666666667, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI5453690, Length=390, Percent_Identity=24.8717948717949, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI201862587, Length=65, Percent_Identity=61.5384615384615, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI201862518, Length=65, Percent_Identity=61.5384615384615, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI56549115, Length=65, Percent_Identity=61.5384615384615, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI88501736, Length=110, Percent_Identity=47.2727272727273, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI27151736, Length=110, Percent_Identity=47.2727272727273, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI47777312, Length=128, Percent_Identity=45.3125, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI23503241, Length=64, Percent_Identity=62.5, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI9558755, Length=108, Percent_Identity=45.3703703703704, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=59.0909090909091, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=59.0909090909091, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI56687498, Length=62, Percent_Identity=54.8387096774194, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI194306642, Length=111, Percent_Identity=44.1441441441441, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI194306640, Length=111, Percent_Identity=44.1441441441441, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI21553335, Length=78, Percent_Identity=48.7179487179487, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI39204547, Length=168, Percent_Identity=32.7380952380952, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI68077168, Length=92, Percent_Identity=45.6521739130435, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI68077166, Length=92, Percent_Identity=45.6521739130435, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI72534740, Length=148, Percent_Identity=36.4864864864865, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI24308127, Length=66, Percent_Identity=46.969696969697, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI29126218, Length=66, Percent_Identity=50, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1786197, Length=379, Percent_Identity=40.6332453825858, Blast_Score=284, Evalue=7e-78,
Organism=Escherichia coli, GI1787235, Length=386, Percent_Identity=31.6062176165803, Blast_Score=178, Evalue=6e-46,
Organism=Caenorhabditis elegans, GI17553096, Length=383, Percent_Identity=30.8093994778068, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17553098, Length=383, Percent_Identity=30.8093994778068, Blast_Score=158, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI17507263, Length=374, Percent_Identity=28.3422459893048, Blast_Score=118, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17534355, Length=66, Percent_Identity=60.6060606060606, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17554644, Length=126, Percent_Identity=38.8888888888889, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17563890, Length=213, Percent_Identity=29.5774647887324, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI212645553, Length=64, Percent_Identity=48.4375, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI86563276, Length=64, Percent_Identity=54.6875, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115532378, Length=101, Percent_Identity=36.6336633663366, Blast_Score=66, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323870, Length=368, Percent_Identity=31.5217391304348, Blast_Score=146, Evalue=5e-36,
Organism=Saccharomyces cerevisiae, GI6324265, Length=366, Percent_Identity=30.8743169398907, Blast_Score=145, Evalue=9e-36,
Organism=Saccharomyces cerevisiae, GI6321094, Length=391, Percent_Identity=31.9693094629156, Blast_Score=128, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6323119, Length=390, Percent_Identity=27.4358974358974, Blast_Score=97, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6322194, Length=103, Percent_Identity=45.6310679611651, Blast_Score=79, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6322388, Length=112, Percent_Identity=41.9642857142857, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323813, Length=131, Percent_Identity=41.2213740458015, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6320888, Length=148, Percent_Identity=31.0810810810811, Blast_Score=63, Evalue=8e-11,
Organism=Drosophila melanogaster, GI45552813, Length=388, Percent_Identity=31.9587628865979, Blast_Score=176, Evalue=2e-44,
Organism=Drosophila melanogaster, GI45552811, Length=388, Percent_Identity=31.9587628865979, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI45549272, Length=388, Percent_Identity=31.9587628865979, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24646562, Length=413, Percent_Identity=29.0556900726392, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24646560, Length=413, Percent_Identity=29.0556900726392, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24646558, Length=413, Percent_Identity=29.0556900726392, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24646556, Length=413, Percent_Identity=29.0556900726392, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI21357547, Length=413, Percent_Identity=29.0556900726392, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI28574949, Length=382, Percent_Identity=26.7015706806283, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI20129487, Length=369, Percent_Identity=29.2682926829268, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24584014, Length=369, Percent_Identity=29.2682926829268, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24658562, Length=250, Percent_Identity=33.2, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24658555, Length=250, Percent_Identity=33.2, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24654066, Length=113, Percent_Identity=44.2477876106195, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24654070, Length=113, Percent_Identity=44.2477876106195, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24654068, Length=113, Percent_Identity=44.2477876106195, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24654072, Length=113, Percent_Identity=44.2477876106195, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI85726398, Length=79, Percent_Identity=55.6962025316456, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=54.6875, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19920464, Length=238, Percent_Identity=26.0504201680672, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI17737735, Length=66, Percent_Identity=46.969696969697, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24668523, Length=66, Percent_Identity=46.969696969697, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI28574723, Length=66, Percent_Identity=46.969696969697, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 41070; Mature: 41070

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSEWANKNYYADLGVSSSASEDEIKKAYRKLARENHPDKNPGDKAAEDRFKKAAEAYD
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
VLGDDKKRKEYDELKALLASGGIRGGFGSGGAGFPGGFRTSTGGFDTSDLFGGGQGGGFS
HHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
ADGGLGDIFGGLFNRGAGSRQSARPTRGADVETEITLSFVEAAKGTTIPVELTGDAPCNT
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCEEEEEECCCCCCCC
CHGSGSKSGHPAKCGTCDGTGFTSENKGAFGFSAPCATCGGTGEVITDPCDNCHGRGTVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEE
KSRSITVRIPTGVEDGQKVRLAGQGEAGPNGKPAGDLFVKVHVKKDDVFTRDGNNILITI
CCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCEEEECCCEEEEEE
PVSFSELALGGAISVPTLNKPVKLKLPAGTPDGRTLRVRGRGIETRDSTGDLLVTVQVSV
CCCHHHHHCCCEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEC
PKNLDDNAAEALRAYAEAETNSGFDPRANWAGQNR
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNNSEWANKNYYADLGVSSSASEDEIKKAYRKLARENHPDKNPGDKAAEDRFKKAAEAYD
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
VLGDDKKRKEYDELKALLASGGIRGGFGSGGAGFPGGFRTSTGGFDTSDLFGGGQGGGFS
HHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC
ADGGLGDIFGGLFNRGAGSRQSARPTRGADVETEITLSFVEAAKGTTIPVELTGDAPCNT
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCEEEEEECCCCCCCC
CHGSGSKSGHPAKCGTCDGTGFTSENKGAFGFSAPCATCGGTGEVITDPCDNCHGRGTVR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEE
KSRSITVRIPTGVEDGQKVRLAGQGEAGPNGKPAGDLFVKVHVKKDDVFTRDGNNILITI
CCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCEEEECCCEEEEEE
PVSFSELALGGAISVPTLNKPVKLKLPAGTPDGRTLRVRGRGIETRDSTGDLLVTVQVSV
CCCHHHHHCCCEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEC
PKNLDDNAAEALRAYAEAETNSGFDPRANWAGQNR
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]