| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296764
Identifier: 145296764
GI number: 145296764
Start: 2953187
End: 2954302
Strand: Reverse
Name: 145296764
Synonym: cgR_2668
Alternate gene names: NA
Gene position: 2954302-2953187 (Counterclockwise)
Preceding gene: 145296765
Following gene: 145296763
Centisome position: 89.14
GC content: 54.3
Gene sequence:
>1116_bases GTGGCATGGCCATCCAACGCCAAAGAAAAACTGTTTATCCACTGGCACTACTGGTGGCAAGCGCATTATCTAGACTGCCT GGTGGATGCAGCTCGTCGGCGCACCACAAAGGCCCGCCGTGACCGCATCAGGGACACGATTCGCGGTATTTCGGTGCGCA ATGTGGGCAAGCTGACCTCGAATCGTTATTACGACGACAAAGCTTGGCTGGCCCTTGCTCTTGGGCGTGCCGGAAAAGTG CGAAAGGTGCGCACACCAAAATCATTGCCTTCGTTGGAACAAAACATCGTCGATGGCATTGATTCCCTTACTGGTGTGCT GCCGTGGCGTTCCGGCGAAACCTTCTACAACGTTCCCTCCAACGGTCCTGCTGCGATCATGATGGCCCGCACCGACCGTT TGGACGAGTCTATGAAAATCACCGATTGGATTTTTGACAACCTGATCGATGACGACGGCCTTGTGATGGACGGATTGCGC ATGCGCATGCACGGACCTGAGCTTGTCCGTTCCATCCACCCGTATTGCCAAGGTGTTGCCATTGGTGCTTGTTTGGAAAT TGCTCTCAAACTGCGTGAGCGCGCAGGCTTGACCGCTACTGTGGTGGATCACTGGTCGGATGCCGATAAGGCAGAAGACT CCCTCAAATACTTCGCACACATCCACGCTGTGGTTCAGGCTGTGTCGCGGAAGATGACCAACTTCCACGGCGTTATTGAT TGGGACACCGGTGACGGCGACGGCGGTTTGTTCAAGGGCATTTTGGTTCGCTATTTAGCTGATGTGGCCATCCGCTTGCC TGACGATTCCCCAACCAACCGGGAAACCAAAAAGATTGCAGCACGCCTGGTACTGGAATCGGCGGAAAGCGTATGGAACC ACCGATTGGAAGTTGATGGCCTTCCGGTATTCGCCACAGACTGGACAACGGATGCACGCCTGCCACAAAACTTTGGTTTG AGTTCCTCTAGTTTGAGCGATCTGGTGAGTGTTGTGCGCGTGGATGAACGTGATCTGTCCGTGCAATTGTCCGGTTGGAT GCTCATGGAAGCAGCAGCGAAAGTGGCCGAAGAACTGGAAAACAACGGCAATAGTTACACCGGTCGCTCCCGATAG
Upstream 100 bases:
>100_bases GTTAGACAAATGGGTAAACAGAGCTGACCTAGCGGAATCCGCCATCAACGAAAGGCATTCCGCGAGGGTTTGGGGTCTGC CTCGAACAAACCTTGGGTTT
Downstream 100 bases:
>100_bases CCCCGATAGTGTATGTGCTGACCTGCGTTTATGCATTTTCCTTAGGTTGAAGGAGATATCACACGACAAAAGTTGAGTGA TGCAGGCATAATTGGCTATG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Glycoside Hydrolase Family Protein; Alpha-1 6-Mannanase; Glycoside Hydrolase; Glycosidase; Glycosyl Hydrolase Family Protein
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MAWPSNAKEKLFIHWHYWWQAHYLDCLVDAARRRTTKARRDRIRDTIRGISVRNVGKLTSNRYYDDKAWLALALGRAGKV RKVRTPKSLPSLEQNIVDGIDSLTGVLPWRSGETFYNVPSNGPAAIMMARTDRLDESMKITDWIFDNLIDDDGLVMDGLR MRMHGPELVRSIHPYCQGVAIGACLEIALKLRERAGLTATVVDHWSDADKAEDSLKYFAHIHAVVQAVSRKMTNFHGVID WDTGDGDGGLFKGILVRYLADVAIRLPDDSPTNRETKKIAARLVLESAESVWNHRLEVDGLPVFATDWTTDARLPQNFGL SSSSLSDLVSVVRVDERDLSVQLSGWMLMEAAAKVAEELENNGNSYTGRSR
Sequences:
>Translated_371_residues MAWPSNAKEKLFIHWHYWWQAHYLDCLVDAARRRTTKARRDRIRDTIRGISVRNVGKLTSNRYYDDKAWLALALGRAGKV RKVRTPKSLPSLEQNIVDGIDSLTGVLPWRSGETFYNVPSNGPAAIMMARTDRLDESMKITDWIFDNLIDDDGLVMDGLR MRMHGPELVRSIHPYCQGVAIGACLEIALKLRERAGLTATVVDHWSDADKAEDSLKYFAHIHAVVQAVSRKMTNFHGVID WDTGDGDGGLFKGILVRYLADVAIRLPDDSPTNRETKKIAARLVLESAESVWNHRLEVDGLPVFATDWTTDARLPQNFGL SSSSLSDLVSVVRVDERDLSVQLSGWMLMEAAAKVAEELENNGNSYTGRSR >Mature_370_residues AWPSNAKEKLFIHWHYWWQAHYLDCLVDAARRRTTKARRDRIRDTIRGISVRNVGKLTSNRYYDDKAWLALALGRAGKVR KVRTPKSLPSLEQNIVDGIDSLTGVLPWRSGETFYNVPSNGPAAIMMARTDRLDESMKITDWIFDNLIDDDGLVMDGLRM RMHGPELVRSIHPYCQGVAIGACLEIALKLRERAGLTATVVDHWSDADKAEDSLKYFAHIHAVVQAVSRKMTNFHGVIDW DTGDGDGGLFKGILVRYLADVAIRLPDDSPTNRETKKIAARLVLESAESVWNHRLEVDGLPVFATDWTTDARLPQNFGLS SSSLSDLVSVVRVDERDLSVQLSGWMLMEAAAKVAEELENNGNSYTGRSR
Specific function: Unknown
COG id: COG4833
COG function: function code G; Predicted glycosyl hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41720; Mature: 41589
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWPSNAKEKLFIHWHYWWQAHYLDCLVDAARRRTTKARRDRIRDTIRGISVRNVGKLTS CCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC NRYYDDKAWLALALGRAGKVRKVRTPKSLPSLEQNIVDGIDSLTGVLPWRSGETFYNVPS CCCCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCC NGPAAIMMARTDRLDESMKITDWIFDNLIDDDGLVMDGLRMRMHGPELVRSIHPYCQGVA CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHH IGACLEIALKLRERAGLTATVVDHWSDADKAEDSLKYFAHIHAVVQAVSRKMTNFHGVID HHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE WDTGDGDGGLFKGILVRYLADVAIRLPDDSPTNRETKKIAARLVLESAESVWNHRLEVDG ECCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECC LPVFATDWTTDARLPQNFGLSSSSLSDLVSVVRVDERDLSVQLSGWMLMEAAAKVAEELE CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHH NNGNSYTGRSR CCCCCCCCCCC >Mature Secondary Structure AWPSNAKEKLFIHWHYWWQAHYLDCLVDAARRRTTKARRDRIRDTIRGISVRNVGKLTS CCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC NRYYDDKAWLALALGRAGKVRKVRTPKSLPSLEQNIVDGIDSLTGVLPWRSGETFYNVPS CCCCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCC NGPAAIMMARTDRLDESMKITDWIFDNLIDDDGLVMDGLRMRMHGPELVRSIHPYCQGVA CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEECCHHHHCCCHHHHHHHHHHHHHHH IGACLEIALKLRERAGLTATVVDHWSDADKAEDSLKYFAHIHAVVQAVSRKMTNFHGVID HHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE WDTGDGDGGLFKGILVRYLADVAIRLPDDSPTNRETKKIAARLVLESAESVWNHRLEVDG ECCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECC LPVFATDWTTDARLPQNFGLSSSSLSDLVSVVRVDERDLSVQLSGWMLMEAAAKVAEELE CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHH NNGNSYTGRSR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA