| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yjbB [C]
Identifier: 145296743
GI number: 145296743
Start: 2929117
End: 2930427
Strand: Direct
Name: yjbB [C]
Synonym: cgR_2647
Alternate gene names: 145296743
Gene position: 2929117-2930427 (Clockwise)
Preceding gene: 145296741
Following gene: 145296748
Centisome position: 88.38
GC content: 50.34
Gene sequence:
>1311_bases ATGTCTAGTGGTTTTGAATATGTTCAACATCCTCGACGAGCCCTCCCTCCGCCTATACCTGAACGGAAAGGTCCTGCCGC AGCATTCCTGCCGGGAACTTTCCATCCCATTAATCCAAAGAATATTGCAGCGAGCCACGATCAGGTACTTCTATCTGGTT GGGGCAAATTTGTGCGTTGGCTCTTGGTGTTGTTGTCCATTTTGGTCATCATCATTGGCATCAACCTCATCTTGGACGGT GTCTACGGATTTGGCGCTTTTTCAACCACCCAGATGTACCAAGTTGCGAAAGATCCACTCATTGGTGTGCTGATCGGTAT CTTGGCTACCGCCTTGGTGCAATCATCAACCACCACCACAACGTTGACGGTGACTGCAGTTGGTACGGGCATTGTGTCGG TGCCTGTGGCGATTCCGATCATTCTTGGCGCAAATATCGGTACGACGATCACCGCGATGCTCGTTGCGTTTTCTTATATG GGCGAACGCAGGGAGTTCAAACGAGCTTTTACTGTTGCCGCCATGCATGTGTGGTTTAACGTGCTCGTCATTTTGGTCCT GTTTGTTGTGGAATTGCTCTTCCACCCGTTCCGCACGATCAGTGGCGCAATCGCAACGGAAATCACACTTCAAACTGGTG GTTCTTTGCCTACCAGTGATGTGATGACCAAGATTTTTGATCCACCGACCCAGCTTTTGGGCATGAATGGTCTGATCGGA TCGATCGGCAATCCAAGCATTTCGGCGATTGTATGTCTTGTGGTGGGCACCATTCTTATTCTGATTTCGGTGCGTGCCAT GAGTTCTCAGATCCGAACCATCACGGCAGCTACGGTCACCTCGATCATGGACAAGGTGATCAACCCAGAGAACAGCCCCA AGGCGACGATTCTTTCCAATTTCTGGAGCTTCATTCTTGGAGTTTTGTTCACGCTCATGGTCACTGCCTCGTCAGTGACC GTGGCTTCCATGCAGCCAGTGGCTGTCTCTGGTGTCGTTAAGCAAAAGCCATTGCTGGGTGTTATTTTGGGTGCCAACGT GGGCACCACCGTGACCGCGATGTTCGCTACTTTCGCGATCGTCAGCGACCAAGGCGAGTTCGCCATCCAAGCTGCGTTGA TTCACCTCATTGTGAACTTAACAGGTGCGCTGTTGGTGTTGTGCATTCCGCAGCTTGCCAATGTGATTATTCACCTGGCT GAGAAGACTGCGAGCCTTACTGCTCGCAGCTACTCCATCACCTTATTCACAATCATCGCATCTTATATCTTGATTCCTTC GGCTGTGCTGATGATTTACTTCCTCATCTAA
Upstream 100 bases:
>100_bases TTTGTTATTGGTTTGTTCACTCCCATGCAATGTACGATCGGTTCTAACGTCTACGGCAATTGACACGTCAATTTAATTCA GGAAAGGGGTGGGAGAATTT
Downstream 100 bases:
>100_bases AACTCTGCTATTCCTTGAAAAATCGTGGTCACAGAGCCACCCACCCAAATCACGTCAGATTCAACATTGATGCAGATCTC CCCGGCGCGGCCGATGGCAG
Product: Na+/phosphate symporter
Products: NA
Alternate protein names: Na+/Picotransporter; Na+/Pi-Cotransporter; Sodium-Dependent Phosphate Pump NptA; Na+/Phosphate Symporter; Sodium-Dependent Phosphate Transporter; Sodium Dependent Phosphate Pump
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MSSGFEYVQHPRRALPPPIPERKGPAAAFLPGTFHPINPKNIAASHDQVLLSGWGKFVRWLLVLLSILVIIIGINLILDG VYGFGAFSTTQMYQVAKDPLIGVLIGILATALVQSSTTTTTLTVTAVGTGIVSVPVAIPIILGANIGTTITAMLVAFSYM GERREFKRAFTVAAMHVWFNVLVILVLFVVELLFHPFRTISGAIATEITLQTGGSLPTSDVMTKIFDPPTQLLGMNGLIG SIGNPSISAIVCLVVGTILILISVRAMSSQIRTITAATVTSIMDKVINPENSPKATILSNFWSFILGVLFTLMVTASSVT VASMQPVAVSGVVKQKPLLGVILGANVGTTVTAMFATFAIVSDQGEFAIQAALIHLIVNLTGALLVLCIPQLANVIIHLA EKTASLTARSYSITLFTIIASYILIPSAVLMIYFLI
Sequences:
>Translated_436_residues MSSGFEYVQHPRRALPPPIPERKGPAAAFLPGTFHPINPKNIAASHDQVLLSGWGKFVRWLLVLLSILVIIIGINLILDG VYGFGAFSTTQMYQVAKDPLIGVLIGILATALVQSSTTTTTLTVTAVGTGIVSVPVAIPIILGANIGTTITAMLVAFSYM GERREFKRAFTVAAMHVWFNVLVILVLFVVELLFHPFRTISGAIATEITLQTGGSLPTSDVMTKIFDPPTQLLGMNGLIG SIGNPSISAIVCLVVGTILILISVRAMSSQIRTITAATVTSIMDKVINPENSPKATILSNFWSFILGVLFTLMVTASSVT VASMQPVAVSGVVKQKPLLGVILGANVGTTVTAMFATFAIVSDQGEFAIQAALIHLIVNLTGALLVLCIPQLANVIIHLA EKTASLTARSYSITLFTIIASYILIPSAVLMIYFLI >Mature_435_residues SSGFEYVQHPRRALPPPIPERKGPAAAFLPGTFHPINPKNIAASHDQVLLSGWGKFVRWLLVLLSILVIIIGINLILDGV YGFGAFSTTQMYQVAKDPLIGVLIGILATALVQSSTTTTTLTVTAVGTGIVSVPVAIPIILGANIGTTITAMLVAFSYMG ERREFKRAFTVAAMHVWFNVLVILVLFVVELLFHPFRTISGAIATEITLQTGGSLPTSDVMTKIFDPPTQLLGMNGLIGS IGNPSISAIVCLVVGTILILISVRAMSSQIRTITAATVTSIMDKVINPENSPKATILSNFWSFILGVLFTLMVTASSVTV ASMQPVAVSGVVKQKPLLGVILGANVGTTVTAMFATFAIVSDQGEFAIQAALIHLIVNLTGALLVLCIPQLANVIIHLAE KTASLTARSYSITLFTIIASYILIPSAVLMIYFLI
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI156627569, Length=367, Percent_Identity=27.7929155313352, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI110611906, Length=139, Percent_Identity=42.4460431654676, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI295789160, Length=139, Percent_Identity=42.4460431654676, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI295789158, Length=139, Percent_Identity=42.4460431654676, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI293597525, Length=377, Percent_Identity=28.9124668435013, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI293597523, Length=377, Percent_Identity=28.9124668435013, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI25014088, Length=377, Percent_Identity=28.9124668435013, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI262399385, Length=136, Percent_Identity=38.9705882352941, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25147712, Length=359, Percent_Identity=25.0696378830084, Blast_Score=105, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46270; Mature: 46139
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGFEYVQHPRRALPPPIPERKGPAAAFLPGTFHPINPKNIAASHDQVLLSGWGKFVRW CCCCCHHHHCCHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LLVLLSILVIIIGINLILDGVYGFGAFSTTQMYQVAKDPLIGVLIGILATALVQSSTTTT HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEE TLTVTAVGTGIVSVPVAIPIILGANIGTTITAMLVAFSYMGERREFKRAFTVAAMHVWFN EEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVILVLFVVELLFHPFRTISGAIATEITLQTGGSLPTSDVMTKIFDPPTQLLGMNGLIG HHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCHHHHHHHHCCCHHHHHCCCCCCC SIGNPSISAIVCLVVGTILILISVRAMSSQIRTITAATVTSIMDKVINPENSPKATILSN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH FWSFILGVLFTLMVTASSVTVASMQPVAVSGVVKQKPLLGVILGANVGTTVTAMFATFAI HHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH VSDQGEFAIQAALIHLIVNLTGALLVLCIPQLANVIIHLAEKTASLTARSYSITLFTIIA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYILIPSAVLMIYFLI HHHHHHHHHHHHHHHC >Mature Secondary Structure SSGFEYVQHPRRALPPPIPERKGPAAAFLPGTFHPINPKNIAASHDQVLLSGWGKFVRW CCCCHHHHCCHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LLVLLSILVIIIGINLILDGVYGFGAFSTTQMYQVAKDPLIGVLIGILATALVQSSTTTT HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEE TLTVTAVGTGIVSVPVAIPIILGANIGTTITAMLVAFSYMGERREFKRAFTVAAMHVWFN EEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVILVLFVVELLFHPFRTISGAIATEITLQTGGSLPTSDVMTKIFDPPTQLLGMNGLIG HHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCHHHHHHHHCCCHHHHHCCCCCCC SIGNPSISAIVCLVVGTILILISVRAMSSQIRTITAATVTSIMDKVINPENSPKATILSN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH FWSFILGVLFTLMVTASSVTVASMQPVAVSGVVKQKPLLGVILGANVGTTVTAMFATFAI HHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH VSDQGEFAIQAALIHLIVNLTGALLVLCIPQLANVIIHLAEKTASLTARSYSITLFTIIA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYILIPSAVLMIYFLI HHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA