| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is cls [H]
Identifier: 145296741
GI number: 145296741
Start: 2925837
End: 2927339
Strand: Direct
Name: cls [H]
Synonym: cgR_2645
Alternate gene names: 145296741
Gene position: 2925837-2927339 (Clockwise)
Preceding gene: 145296740
Following gene: 145296743
Centisome position: 88.28
GC content: 56.95
Gene sequence:
>1503_bases ATGATCTTTCAGATCAACCTCGAATCTTGGCAAACCGTTGGTTTGATCATCGACTACACCATCAAAATCATCGCCATTGG CTACGTACCCGAAGGACGCAGACCCAGCTCCTCCACCGCGTGGCTCCTGGCAATTTTGCTGCTCCCCTACGTCGGACTCC CACTGTTCCTGCTTATGGGATCGCCATACATCAACCGGCGACGCCACCGCATCCAACAAGAAATCAACGACCTCATCGAA GACGTCCACGACGACGTCCCCGACATCCCCACCGGAATGGATGTCTCCGCGGAAGTTGAATCTGTCATCAAACTCAACCG CCGCCTCACCCGCATGCCAGCAGTGACCGGCGGAAACAACGGCTTCTACTCCGACTACCGTGAATCCCTCAAACGGATGA CCGCCGCAATCGACGAAGCCGAAGAATACATCTACGTCGAGATCTACATCATGGCCTGGGATTCCTACACCCAACCATTC TTCGCAGCACTCGAACGAGCCCATAACCGCGGCGTCAAAGTCCGACTCCTTTTCGACCACGTCGGCAGCTGGAAATACCC CGGCTACCACCGTCTCAAAAAAGAACTCAACCGCATGGGCTTCGCCTGGTACCTCATGCTCCCCCTCCAACCCTGGCGAC GCCGCTTCCGCCGACCCGACCTGCGCAACCACCGCAAAATGCTCATCATCGACGGCCACACCGCCTTCATGGGCTCCCAA AATCTCATCGCCCCGAGTTACCTACAAAAGAAAAACATCAAACTCGGCCGCGAATGGAAAGACCTCATGGTCGAACTCAC CGGCCCCATCGTCTCCTCCATGGAAATGATCTTCGCCGGCGACTGGTACGTCGAATCCAACGAAGCCCTCGACATCCGCG ACCACGCAGAAGCCCACGGCTACATCGGCAACACTCAAAAAGACTCCGCCACCAACCTCGTGCAGCTCATCCCCTCCGGC CCTGGTTACACCACAGAACCCAACCTGCGCATGTTCAACTCCATCGTTCACCACGCCAAAGAACGACTCATCTTGTGCAG CCCCTACTTCATCCCCGACGAATCCCTCCTCGAAGCCGTCACCTCAGCCTGCTACCGCGGAGTAACCGTCGAACTATTCG TCTCTGAACAAGCCGACCAATTCGCCATCGACCACGCCCAATCCTCCTACTACCAGGCACTCCTTGAAGCCGGCGTGAAA ATCTACCAATTCCCCAAACCCGACGTCCTCCACACCAAGTACATGATCGCCGACCCCGACGACACCACCGGCAACGAAGC CCTCGGAGTCCTCGGATCCTCCAACCTCGACATCCGCAGCTTTGGCCTCAACTACGAAATCTCCCTGATGATCGCCAAAG GCAACCTCATCCACGAACTCAACGCCCTCACGGACCGTTACCGCACAGTAAGTCTCAAGCTCACCTTGGATAAGTGGAAC CAGCGCAGTTGGCGGCGCCGCTACGTGGACAATGTCATGCGTTTGACCTCGGCGCTGCAGTAG
Upstream 100 bases:
>100_bases TGCAACCGCGGGTGAAACCTTTGTGGACGTTGAAGAACGCAGCGGAACCGGCGCCTCTGACCACGCACCAGTCATCGTTG ATTACAAGGTGTAACTGCGT
Downstream 100 bases:
>100_bases TTTGGCGCGTTTGGAGTGCGTTTGAGGTGGCTTTTAGAGGGACCGGCTACACCCCACCGCCATTATGCAAATATTCGTTC GAAACTTTGGTCGGGCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MIFQINLESWQTVGLIIDYTIKIIAIGYVPEGRRPSSSTAWLLAILLLPYVGLPLFLLMGSPYINRRRHRIQQEINDLIE DVHDDVPDIPTGMDVSAEVESVIKLNRRLTRMPAVTGGNNGFYSDYRESLKRMTAAIDEAEEYIYVEIYIMAWDSYTQPF FAALERAHNRGVKVRLLFDHVGSWKYPGYHRLKKELNRMGFAWYLMLPLQPWRRRFRRPDLRNHRKMLIIDGHTAFMGSQ NLIAPSYLQKKNIKLGREWKDLMVELTGPIVSSMEMIFAGDWYVESNEALDIRDHAEAHGYIGNTQKDSATNLVQLIPSG PGYTTEPNLRMFNSIVHHAKERLILCSPYFIPDESLLEAVTSACYRGVTVELFVSEQADQFAIDHAQSSYYQALLEAGVK IYQFPKPDVLHTKYMIADPDDTTGNEALGVLGSSNLDIRSFGLNYEISLMIAKGNLIHELNALTDRYRTVSLKLTLDKWN QRSWRRRYVDNVMRLTSALQ
Sequences:
>Translated_500_residues MIFQINLESWQTVGLIIDYTIKIIAIGYVPEGRRPSSSTAWLLAILLLPYVGLPLFLLMGSPYINRRRHRIQQEINDLIE DVHDDVPDIPTGMDVSAEVESVIKLNRRLTRMPAVTGGNNGFYSDYRESLKRMTAAIDEAEEYIYVEIYIMAWDSYTQPF FAALERAHNRGVKVRLLFDHVGSWKYPGYHRLKKELNRMGFAWYLMLPLQPWRRRFRRPDLRNHRKMLIIDGHTAFMGSQ NLIAPSYLQKKNIKLGREWKDLMVELTGPIVSSMEMIFAGDWYVESNEALDIRDHAEAHGYIGNTQKDSATNLVQLIPSG PGYTTEPNLRMFNSIVHHAKERLILCSPYFIPDESLLEAVTSACYRGVTVELFVSEQADQFAIDHAQSSYYQALLEAGVK IYQFPKPDVLHTKYMIADPDDTTGNEALGVLGSSNLDIRSFGLNYEISLMIAKGNLIHELNALTDRYRTVSLKLTLDKWN QRSWRRRYVDNVMRLTSALQ >Mature_500_residues MIFQINLESWQTVGLIIDYTIKIIAIGYVPEGRRPSSSTAWLLAILLLPYVGLPLFLLMGSPYINRRRHRIQQEINDLIE DVHDDVPDIPTGMDVSAEVESVIKLNRRLTRMPAVTGGNNGFYSDYRESLKRMTAAIDEAEEYIYVEIYIMAWDSYTQPF FAALERAHNRGVKVRLLFDHVGSWKYPGYHRLKKELNRMGFAWYLMLPLQPWRRRFRRPDLRNHRKMLIIDGHTAFMGSQ NLIAPSYLQKKNIKLGREWKDLMVELTGPIVSSMEMIFAGDWYVESNEALDIRDHAEAHGYIGNTQKDSATNLVQLIPSG PGYTTEPNLRMFNSIVHHAKERLILCSPYFIPDESLLEAVTSACYRGVTVELFVSEQADQFAIDHAQSSYYQALLEAGVK IYQFPKPDVLHTKYMIADPDDTTGNEALGVLGSSNLDIRSFGLNYEISLMIAKGNLIHELNALTDRYRTVSLKLTLDKWN QRSWRRRYVDNVMRLTSALQ
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=498, Percent_Identity=29.1164658634538, Blast_Score=191, Evalue=1e-49, Organism=Escherichia coli, GI1787007, Length=335, Percent_Identity=26.2686567164179, Blast_Score=79, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 57551; Mature: 57551
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFQINLESWQTVGLIIDYTIKIIAIGYVPEGRRPSSSTAWLLAILLLPYVGLPLFLLMG CEEEEECCCCCEEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC SPYINRRRHRIQQEINDLIEDVHDDVPDIPTGMDVSAEVESVIKLNRRLTRMPAVTGGNN CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCC GFYSDYRESLKRMTAAIDEAEEYIYVEIYIMAWDSYTQPFFAALERAHNRGVKVRLLFDH CCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEC VGSWKYPGYHRLKKELNRMGFAWYLMLPLQPWRRRFRRPDLRNHRKMLIIDGHTAFMGSQ CCCCCCCCHHHHHHHHHHCCEEEEEEECCCHHHHHCCCCCCCCCCEEEEECCCEEEECCC NLIAPSYLQKKNIKLGREWKDLMVELTGPIVSSMEMIFAGDWYVESNEALDIRDHAEAHG CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCEEEECCCEECCHHHHHHCC YIGNTQKDSATNLVQLIPSGPGYTTEPNLRMFNSIVHHAKERLILCSPYFIPDESLLEAV CCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHH TSACYRGVTVELFVSEQADQFAIDHAQSSYYQALLEAGVKIYQFPKPDVLHTKYMIADPD HHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEECCC DTTGNEALGVLGSSNLDIRSFGLNYEISLMIAKGNLIHELNALTDRYRTVSLKLTLDKWN CCCCCCEEEEECCCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHCEEEEEEEEEECCCC QRSWRRRYVDNVMRLTSALQ CHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIFQINLESWQTVGLIIDYTIKIIAIGYVPEGRRPSSSTAWLLAILLLPYVGLPLFLLMG CEEEEECCCCCEEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC SPYINRRRHRIQQEINDLIEDVHDDVPDIPTGMDVSAEVESVIKLNRRLTRMPAVTGGNN CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCC GFYSDYRESLKRMTAAIDEAEEYIYVEIYIMAWDSYTQPFFAALERAHNRGVKVRLLFDH CCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEC VGSWKYPGYHRLKKELNRMGFAWYLMLPLQPWRRRFRRPDLRNHRKMLIIDGHTAFMGSQ CCCCCCCCHHHHHHHHHHCCEEEEEEECCCHHHHHCCCCCCCCCCEEEEECCCEEEECCC NLIAPSYLQKKNIKLGREWKDLMVELTGPIVSSMEMIFAGDWYVESNEALDIRDHAEAHG CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCEEEECCCEECCHHHHHHCC YIGNTQKDSATNLVQLIPSGPGYTTEPNLRMFNSIVHHAKERLILCSPYFIPDESLLEAV CCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHH TSACYRGVTVELFVSEQADQFAIDHAQSSYYQALLEAGVKIYQFPKPDVLHTKYMIADPD HHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEECCC DTTGNEALGVLGSSNLDIRSFGLNYEISLMIAKGNLIHELNALTDRYRTVSLKLTLDKWN CCCCCCEEEEECCCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHCEEEEEEEEEECCCC QRSWRRRYVDNVMRLTSALQ CHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA