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The map label for this gene is oppA [H]

Identifier: 145296649

GI number: 145296649

Start: 2823026

End: 2824636

Strand: Direct

Name: oppA [H]

Synonym: cgR_2556

Alternate gene names: 145296649

Gene position: 2823026-2824636 (Clockwise)

Preceding gene: 145296646

Following gene: 145296650

Centisome position: 85.18

GC content: 59.16

Gene sequence:

>1611_bases
ATGAGCACCACGATTACTCGCCGCAATTTCCTCCGAGCAACCGGAATCCTCGGTGCCGCAGCTGGCATCGGCGCAACACT
TGCTGCATGTGCACCAGACAACACCGGCACCAGCGGATCCACCTCCACCGCAGCTGGCACCGGAACTGCAAATGAAGAAG
GCACCATCACCGCAGCCATCTCCTACGAACTGGGAACCAACGGCTACGACCCAATGACCACCACCTCGGCTCTCACTGTG
GCAGCCAACTGGCACACCCTTGAAGGCCTCACCGAAATCGACCCAGCCACCGGCGAGGTCTACGCAGCACTCGCCAGCGC
ACTGCCTTCAGCCGATGCGACCTCCCTAGACATCAAGCTTCGCGACGGCGCCACCTTCCACAACGGCGACGCAGTCACCG
CAGACGACGTAGTCTTCTCTTTTGAGCGAGTCCTCGACCCAGCCAACAACTCCCTTTACGCATCCTTCATCCCATTCATC
AAGTCAGTCACCAAGAAGGATGACACCACCGTCACCATCGACCTCGACTACGCAACCGGCATCATCAGCGAACGCCTCGC
AGTAGTAAAGATCGTGCCAAAGTCCGTCGTGGAAGCAGACGCATCCGGATTCGACGCCAACCCAATCGGCTCCGGCCCAT
ACAAGATGACCGACAACGGTGCATCCAAGGTGGTCAAGTTCGAGCGCAACGACGACTACAACGGCCCACGCCCAGCACGT
GCCGCCAAGATGGAATGGCAGATCATCCCCGACGCCTCCACCCGCACCAACTCCCTTCAGTCCGGCAGCACCATGGCCAT
CGACTCCGTTCCATACCTGTCGATCCCACAGCTTGAAGCCACCAGCACCGTAGAATCCGTCCAAGGATTCGGCCTCCTGT
TCGCCATGTTCAACTGCTCCGAAGGCAACCCCTTCAACGACGTCCGCAACCGCCAGGCATTCCTCTACGCACTGGACATG
GACAAGATCGTCAAGACCGGCATGTCCGACCAGGCAACCCCAGCCACCTCCTTCGTGCAGAAGGAACACCCCAACTACAA
CCAGGCATCCACGGTCTACTCCCTCGACGCCGACAAAGCCAAGGCGCTGTTCGCTGAAACCGGCCTTACCAGCCTCAACC
TCCTGTGCACCGACCACGACTGGGTCAAGAACTGCACCCCACTGATCCAGGAATCCCTCACAGCCCTTGGCATCAACGTT
TCCTTCACCGAACGTAAATCCGCCGACGTCTACAACACCATCGACGGCAAGCCAGAAGCCTATGACGTCGTCATCGCCCC
AGGTGACCCATCCGTCTTCGGCAACGACCCAGACCTGCTCATGCGCTGGTGGTACGCCGGCGACGTCTGGACCGACTCCC
GCATGCACTGGAAGGGCAGCGAATCCTACGACCAGGTACAAAACCTGCTGGAAGAAGGCATCCGCGCCACCGATAAGGCA
GAACAGCAAGACATCTGGAACCGCACCTTCGACGCACTGTCCGAAAACGTTCCGCTCTACCCACTGTTCCACCGCAAGGT
CCCAACCGCATGGAACTCCAGCGTCCTGGTCGACTTCAAGCCAATCTCCCTCACCGGCTTGAGCTTCTCAGGTGTTGCAA
CTACTGAATAA

Upstream 100 bases:

>100_bases
CTACAGCAATTCGATGACACCACTCACAATTTCTTTTAATGAGCATAGCGTCACAATTCAACTCACGGCCTGGGCCCCTC
TTTTAAAAAGGATGTACCTC

Downstream 100 bases:

>100_bases
CAAACTTAGTGGCTTTGAAAGCCCGGCGTAGCCAGAATTCTGCGCCGCGCCGGGCTTTTTCTCTTCAGTTTTCTCCAGCT
CTCTCCAATTCTTTCCAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MSTTITRRNFLRATGILGAAAGIGATLAACAPDNTGTSGSTSTAAGTGTANEEGTITAAISYELGTNGYDPMTTTSALTV
AANWHTLEGLTEIDPATGEVYAALASALPSADATSLDIKLRDGATFHNGDAVTADDVVFSFERVLDPANNSLYASFIPFI
KSVTKKDDTTVTIDLDYATGIISERLAVVKIVPKSVVEADASGFDANPIGSGPYKMTDNGASKVVKFERNDDYNGPRPAR
AAKMEWQIIPDASTRTNSLQSGSTMAIDSVPYLSIPQLEATSTVESVQGFGLLFAMFNCSEGNPFNDVRNRQAFLYALDM
DKIVKTGMSDQATPATSFVQKEHPNYNQASTVYSLDADKAKALFAETGLTSLNLLCTDHDWVKNCTPLIQESLTALGINV
SFTERKSADVYNTIDGKPEAYDVVIAPGDPSVFGNDPDLLMRWWYAGDVWTDSRMHWKGSESYDQVQNLLEEGIRATDKA
EQQDIWNRTFDALSENVPLYPLFHRKVPTAWNSSVLVDFKPISLTGLSFSGVATTE

Sequences:

>Translated_536_residues
MSTTITRRNFLRATGILGAAAGIGATLAACAPDNTGTSGSTSTAAGTGTANEEGTITAAISYELGTNGYDPMTTTSALTV
AANWHTLEGLTEIDPATGEVYAALASALPSADATSLDIKLRDGATFHNGDAVTADDVVFSFERVLDPANNSLYASFIPFI
KSVTKKDDTTVTIDLDYATGIISERLAVVKIVPKSVVEADASGFDANPIGSGPYKMTDNGASKVVKFERNDDYNGPRPAR
AAKMEWQIIPDASTRTNSLQSGSTMAIDSVPYLSIPQLEATSTVESVQGFGLLFAMFNCSEGNPFNDVRNRQAFLYALDM
DKIVKTGMSDQATPATSFVQKEHPNYNQASTVYSLDADKAKALFAETGLTSLNLLCTDHDWVKNCTPLIQESLTALGINV
SFTERKSADVYNTIDGKPEAYDVVIAPGDPSVFGNDPDLLMRWWYAGDVWTDSRMHWKGSESYDQVQNLLEEGIRATDKA
EQQDIWNRTFDALSENVPLYPLFHRKVPTAWNSSVLVDFKPISLTGLSFSGVATTE
>Mature_535_residues
STTITRRNFLRATGILGAAAGIGATLAACAPDNTGTSGSTSTAAGTGTANEEGTITAAISYELGTNGYDPMTTTSALTVA
ANWHTLEGLTEIDPATGEVYAALASALPSADATSLDIKLRDGATFHNGDAVTADDVVFSFERVLDPANNSLYASFIPFIK
SVTKKDDTTVTIDLDYATGIISERLAVVKIVPKSVVEADASGFDANPIGSGPYKMTDNGASKVVKFERNDDYNGPRPARA
AKMEWQIIPDASTRTNSLQSGSTMAIDSVPYLSIPQLEATSTVESVQGFGLLFAMFNCSEGNPFNDVRNRQAFLYALDMD
KIVKTGMSDQATPATSFVQKEHPNYNQASTVYSLDADKAKALFAETGLTSLNLLCTDHDWVKNCTPLIQESLTALGINVS
FTERKSADVYNTIDGKPEAYDVVIAPGDPSVFGNDPDLLMRWWYAGDVWTDSRMHWKGSESYDQVQNLLEEGIRATDKAE
QQDIWNRTFDALSENVPLYPLFHRKVPTAWNSSVLVDFKPISLTGLSFSGVATTE

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=469, Percent_Identity=23.8805970149254, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789966, Length=330, Percent_Identity=27.8787878787879, Blast_Score=97, Evalue=4e-21,
Organism=Escherichia coli, GI1787762, Length=472, Percent_Identity=24.7881355932203, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1787551, Length=484, Percent_Identity=22.1074380165289, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI1789887, Length=360, Percent_Identity=23.3333333333333, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57668; Mature: 57537

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTITRRNFLRATGILGAAAGIGATLAACAPDNTGTSGSTSTAAGTGTANEEGTITAAI
CCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
SYELGTNGYDPMTTTSALTVAANWHTLEGLTEIDPATGEVYAALASALPSADATSLDIKL
EEECCCCCCCCCCCCCEEEEEECCHHHCCCHHCCCCCHHHHHHHHHHCCCCCCCEEEEEE
RDGATFHNGDAVTADDVVFSFERVLDPANNSLYASFIPFIKSVTKKDDTTVTIDLDYATG
ECCCEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHH
IISERLAVVKIVPKSVVEADASGFDANPIGSGPYKMTDNGASKVVKFERNDDYNGPRPAR
HHHHCEEEEEECCHHHHHCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCC
AAKMEWQIIPDASTRTNSLQSGSTMAIDSVPYLSIPQLEATSTVESVQGFGLLFAMFNCS
CCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECC
EGNPFNDVRNRQAFLYALDMDKIVKTGMSDQATPATSFVQKEHPNYNQASTVYSLDADKA
CCCCHHHHCCCEEEEEEECHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCHHH
KALFAETGLTSLNLLCTDHDWVKNCTPLIQESLTALGINVSFTERKSADVYNTIDGKPEA
HHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCE
YDVVIAPGDPSVFGNDPDLLMRWWYAGDVWTDSRMHWKGSESYDQVQNLLEEGIRATDKA
EEEEEECCCCCCCCCCHHHEEEEEECCCEEECCEEEECCCCCHHHHHHHHHHHCCCCCCH
EQQDIWNRTFDALSENVPLYPLFHRKVPTAWNSSVLVDFKPISLTGLSFSGVATTE
HHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCEEEEEECEEEECCEECCCCCCC
>Mature Secondary Structure 
STTITRRNFLRATGILGAAAGIGATLAACAPDNTGTSGSTSTAAGTGTANEEGTITAAI
CCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
SYELGTNGYDPMTTTSALTVAANWHTLEGLTEIDPATGEVYAALASALPSADATSLDIKL
EEECCCCCCCCCCCCCEEEEEECCHHHCCCHHCCCCCHHHHHHHHHHCCCCCCCEEEEEE
RDGATFHNGDAVTADDVVFSFERVLDPANNSLYASFIPFIKSVTKKDDTTVTIDLDYATG
ECCCEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHH
IISERLAVVKIVPKSVVEADASGFDANPIGSGPYKMTDNGASKVVKFERNDDYNGPRPAR
HHHHCEEEEEECCHHHHHCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCC
AAKMEWQIIPDASTRTNSLQSGSTMAIDSVPYLSIPQLEATSTVESVQGFGLLFAMFNCS
CCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECC
EGNPFNDVRNRQAFLYALDMDKIVKTGMSDQATPATSFVQKEHPNYNQASTVYSLDADKA
CCCCHHHHCCCEEEEEEECHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCHHH
KALFAETGLTSLNLLCTDHDWVKNCTPLIQESLTALGINVSFTERKSADVYNTIDGKPEA
HHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCE
YDVVIAPGDPSVFGNDPDLLMRWWYAGDVWTDSRMHWKGSESYDQVQNLLEEGIRATDKA
EEEEEECCCCCCCCCCHHHEEEEEECCCEEECCEEEECCCCCHHHHHHHHHHHCCCCCCH
EQQDIWNRTFDALSENVPLYPLFHRKVPTAWNSSVLVDFKPISLTGLSFSGVATTE
HHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCEEEEEECEEEECCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]