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The map label for this gene is yclF [H]

Identifier: 145296599

GI number: 145296599

Start: 2768200

End: 2769585

Strand: Reverse

Name: yclF [H]

Synonym: cgR_2507

Alternate gene names: 145296599

Gene position: 2769585-2768200 (Counterclockwise)

Preceding gene: 145296602

Following gene: 145296598

Centisome position: 83.57

GC content: 52.6

Gene sequence:

>1386_bases
ATGTGGGAGCGATTCAGCTTCTACGGCATGCAAGCACTCTTGGTGTACTACCTGTATTTTGATGTTGCAGCCGGTGGATT
AGGCCTTGATCAAACCCAAGCAACAGGACTGGTCGGCGTTTATGGCGCACTGCTCTACCTCTGCTGTTGGGCAGGCGGTT
GGGTCAGTGACAGAGTCCTGGGCGCAGAAAAAACCCTGCTGGGCGGTGCGATCTCAGTAACCATCGGACACCTTGTGCTC
GCCGGCATTGGTGGGAAAATAGGTCTAGCCATTGGTCTTGGATGCATCGCGATTGGTTCAGGATTTGTAAAAACAGCAGC
CATCACGGTGCTTGGGTCCAGACACGGCGAACAAGAAGGTGACGCCAAGGCAGATCCCGCATTCCAACTCTTCTACCTCG
GAATCAACGTTGGTGCACTGCTCGGACCACTCCTGACCGGTTGGCTCTCCAGCAGGTATTCCTTTGAAATGGGATTCGGC
GCAGCCGCAGTCCTTATGATCGGCGGATTGGGAATCTACGCAGCGTTGCGGAAACCAATGCTGCAATCTTTCCCGCTCGA
GGTAAAGAAAGCTCTGCTCCGCGCCCAAAACCCTGCAGAAAAACATGTGATTAGCACGGCATTTGCTGCAGTAGCTGTGC
TTTGCGGAGTGCTGCTTTACCTTCTCCTTACTGAAACAATCAGCGCAGACCAACTTGCCGGAGCTCTGCTTTTAGTAACA
ATCGGTGCAGCACTATGGCTCATTATCCAGCCTTTACGACACCCACAAGTCAGCTCCGAAGAGAAACGAAAAGTGCTGGC
ATTCATCCCGATCTTCATCTGCTCAACCGCATTCTGGGCAGTGCAAGCACAAACCTACGGCGTACTAGCTGTGTACTCCC
AGGAACGTGTTGACCGCATGGTTGGCGATTTTGAGATTCCAGCAGCCTGGTCACAATCACTCAACCCATTCTTTATCCTT
GCGCTGTCCATCCCGATCTCCCTGTGGTTTATGTGCGGATCACGCGCCCCAAGAGTGAAAATTGGAATCAGCATTGGAGT
GATCATTGCGGGAAGTGGGCTTCTAGTTCTTATTCCATTTGTTGGAATGCCGCTCGCGCCAGTGTGGGTGCTGCCTTTAA
GTGTTTTCCTCATCTCACTGGGAGAACTTTTCATCGGACCCGGAGGAATGGCTGCGACAGCGCACCACGCACCACGAATG
TTTGCCACACGATTCTCCGCCCTGTATTTCCTCACACTCGCCATCGGCATGTCTATTGCAGGTAATGTGTCCAAATTTTA
CGACCCCACCAACCACACCTCCGAGCTCCGATACTTCGCGGTATTTGGCATTTCGATCATCGTCATCGGTGTCGGTTCAC
TGATGGTGGCCAAGAAGGTTGGATAA

Upstream 100 bases:

>100_bases
AAGTGTTTTTCATTGCCGCAGCTTTGTCTTAGGAGAAGTCATGGTCCAACTGGATCAACGGGTTAGGTTCAAAAGCGCAA
CCTCAATAATCAGTATTGAA

Downstream 100 bases:

>100_bases
CAGGGTTAATCTTGGGTGATATTGAAATGACGTATTCCTGATTGGGCTGAAAAATCTGTGACATCACCTGAATTACAAAA
CATCCTCAACAATTATTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MWERFSFYGMQALLVYYLYFDVAAGGLGLDQTQATGLVGVYGALLYLCCWAGGWVSDRVLGAEKTLLGGAISVTIGHLVL
AGIGGKIGLAIGLGCIAIGSGFVKTAAITVLGSRHGEQEGDAKADPAFQLFYLGINVGALLGPLLTGWLSSRYSFEMGFG
AAAVLMIGGLGIYAALRKPMLQSFPLEVKKALLRAQNPAEKHVISTAFAAVAVLCGVLLYLLLTETISADQLAGALLLVT
IGAALWLIIQPLRHPQVSSEEKRKVLAFIPIFICSTAFWAVQAQTYGVLAVYSQERVDRMVGDFEIPAAWSQSLNPFFIL
ALSIPISLWFMCGSRAPRVKIGISIGVIIAGSGLLVLIPFVGMPLAPVWVLPLSVFLISLGELFIGPGGMAATAHHAPRM
FATRFSALYFLTLAIGMSIAGNVSKFYDPTNHTSELRYFAVFGISIIVIGVGSLMVAKKVG

Sequences:

>Translated_461_residues
MWERFSFYGMQALLVYYLYFDVAAGGLGLDQTQATGLVGVYGALLYLCCWAGGWVSDRVLGAEKTLLGGAISVTIGHLVL
AGIGGKIGLAIGLGCIAIGSGFVKTAAITVLGSRHGEQEGDAKADPAFQLFYLGINVGALLGPLLTGWLSSRYSFEMGFG
AAAVLMIGGLGIYAALRKPMLQSFPLEVKKALLRAQNPAEKHVISTAFAAVAVLCGVLLYLLLTETISADQLAGALLLVT
IGAALWLIIQPLRHPQVSSEEKRKVLAFIPIFICSTAFWAVQAQTYGVLAVYSQERVDRMVGDFEIPAAWSQSLNPFFIL
ALSIPISLWFMCGSRAPRVKIGISIGVIIAGSGLLVLIPFVGMPLAPVWVLPLSVFLISLGELFIGPGGMAATAHHAPRM
FATRFSALYFLTLAIGMSIAGNVSKFYDPTNHTSELRYFAVFGISIIVIGVGSLMVAKKVG
>Mature_461_residues
MWERFSFYGMQALLVYYLYFDVAAGGLGLDQTQATGLVGVYGALLYLCCWAGGWVSDRVLGAEKTLLGGAISVTIGHLVL
AGIGGKIGLAIGLGCIAIGSGFVKTAAITVLGSRHGEQEGDAKADPAFQLFYLGINVGALLGPLLTGWLSSRYSFEMGFG
AAAVLMIGGLGIYAALRKPMLQSFPLEVKKALLRAQNPAEKHVISTAFAAVAVLCGVLLYLLLTETISADQLAGALLLVT
IGAALWLIIQPLRHPQVSSEEKRKVLAFIPIFICSTAFWAVQAQTYGVLAVYSQERVDRMVGDFEIPAAWSQSLNPFFIL
ALSIPISLWFMCGSRAPRVKIGISIGVIIAGSGLLVLIPFVGMPLAPVWVLPLSVFLISLGELFIGPGGMAATAHHAPRM
FATRFSALYFLTLAIGMSIAGNVSKFYDPTNHTSELRYFAVFGISIIVIGVGSLMVAKKVG

Specific function: Unknown

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family [H]

Homologues:

Organism=Homo sapiens, GI226371746, Length=188, Percent_Identity=29.2553191489362, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI4827008, Length=208, Percent_Identity=28.8461538461538, Blast_Score=70, Evalue=5e-12,
Organism=Escherichia coli, GI1786927, Length=408, Percent_Identity=30.1470588235294, Blast_Score=125, Evalue=8e-30,
Organism=Escherichia coli, GI1790572, Length=364, Percent_Identity=27.7472527472527, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1787922, Length=475, Percent_Identity=24.8421052631579, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1789911, Length=473, Percent_Identity=25.5813953488372, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI28571098, Length=374, Percent_Identity=24.8663101604278, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24639585, Length=357, Percent_Identity=25.4901960784314, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24639583, Length=357, Percent_Identity=25.4901960784314, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24639581, Length=357, Percent_Identity=25.4901960784314, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571102, Length=374, Percent_Identity=24.8663101604278, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571100, Length=374, Percent_Identity=24.8663101604278, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 48931; Mature: 48931

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWERFSFYGMQALLVYYLYFDVAAGGLGLDQTQATGLVGVYGALLYLCCWAGGWVSDRVL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCHHHHHC
GAEKTLLGGAISVTIGHLVLAGIGGKIGLAIGLGCIAIGSGFVKTAAITVLGSRHGEQEG
CCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
DAKADPAFQLFYLGINVGALLGPLLTGWLSSRYSFEMGFGAAAVLMIGGLGIYAALRKPM
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
LQSFPLEVKKALLRAQNPAEKHVISTAFAAVAVLCGVLLYLLLTETISADQLAGALLLVT
HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IGAALWLIIQPLRHPQVSSEEKRKVLAFIPIFICSTAFWAVQAQTYGVLAVYSQERVDRM
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEHHHCCEEEEECHHHHHHH
VGDFEIPAAWSQSLNPFFILALSIPISLWFMCGSRAPRVKIGISIGVIIAGSGLLVLIPF
HCCCCCCCHHHCCCCCEEEEEHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCEEEEHH
VGMPLAPVWVLPLSVFLISLGELFIGPGGMAATAHHAPRMFATRFSALYFLTLAIGMSIA
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHC
GNVSKFYDPTNHTSELRYFAVFGISIIVIGVGSLMVAKKVG
CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWERFSFYGMQALLVYYLYFDVAAGGLGLDQTQATGLVGVYGALLYLCCWAGGWVSDRVL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCHHHHHC
GAEKTLLGGAISVTIGHLVLAGIGGKIGLAIGLGCIAIGSGFVKTAAITVLGSRHGEQEG
CCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
DAKADPAFQLFYLGINVGALLGPLLTGWLSSRYSFEMGFGAAAVLMIGGLGIYAALRKPM
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
LQSFPLEVKKALLRAQNPAEKHVISTAFAAVAVLCGVLLYLLLTETISADQLAGALLLVT
HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IGAALWLIIQPLRHPQVSSEEKRKVLAFIPIFICSTAFWAVQAQTYGVLAVYSQERVDRM
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEHHHCCEEEEECHHHHHHH
VGDFEIPAAWSQSLNPFFILALSIPISLWFMCGSRAPRVKIGISIGVIIAGSGLLVLIPF
HCCCCCCCHHHCCCCCEEEEEHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCEEEEHH
VGMPLAPVWVLPLSVFLISLGELFIGPGGMAATAHHAPRMFATRFSALYFLTLAIGMSIA
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHC
GNVSKFYDPTNHTSELRYFAVFGISIIVIGVGSLMVAKKVG
CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]