| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is pstS3 [H]
Identifier: 145296570
GI number: 145296570
Start: 2735403
End: 2736530
Strand: Reverse
Name: pstS3 [H]
Synonym: cgR_2478
Alternate gene names: 145296570
Gene position: 2736530-2735403 (Counterclockwise)
Preceding gene: 145296571
Following gene: 145296569
Centisome position: 82.57
GC content: 57.36
Gene sequence:
>1128_bases GTGAACCTCACTCTTAAGCGCTCCATCGCCCTTGTGGGCGCAGTTACTGCAGGCTCCTTCGCTCTTGTAGCTTGCTCCGA CTCCAATGAGTCTGATTCCACCTCCTCATCTGCAGCTTCCACCGGTTCTTCCGATGCTGCATCCATTGAGGGCCTTTCCG GTGTTACCGGTCAGCTCGTTGCTGAAGGTGCATCTTCCCAGCAGTCCGCAATGGACTACTTTGGTATCCGTTACTCCGAG GCTGTCAGCGGTGCATCTCTGGCTTACACCCCTTCAGGTTCCGGTTCCGGCCGCACCAACTTCGCTGCAGGCCAGGTTGC TTTCGGTGGCTCCGACTCCGCAATGAAGGACGACCAGGCTGCAGAAGCAGAAGCACGTTGCAACGGCAACGAAGCATGGC ACCTGCCATTCGTTATCGGCCCAGTTGCAGTTGCTTACAACCTGCCTGGCGTTGACACCCTGAACCTGGACACCAACACC ATCGCTCAGATCTTCAAGGGCGAGATCACCAAGTGGAACGACGAAGCAATCGCTTCCCAGAACGAGGGCACCGACCTCCC AGACCAGGACATCTCCGTTCTGTACCGTTCCGAAGAATCCGGTACCTCCGACAACTTCCAGAAGTTCCTCGGAGCTTCCA CCGACATCTGGGAGACCGAAGGCCAGCAGTTCCCAACCGAGGTTGGCTCCGGTGCGCAGGGCTCCAACGGTGTAGCTTCT GAGGCTTCCAACATCGAGGGTGCAATCACCTACGTTGAAGCTGGTTTCGCTAACCAGTCCGGCCTGGGCGTTGCAAACAT CGACTTCGGTTCCGGCCCAGTTAAACTCAACGCTGAGTCCGTTGGCGTTGCACTTGGTGCACTCGACTTCCTGACTGAGG GCCACAACATGGTTGTTGACACCGACGCTATGTTCGCAATGAACGAAGCCGGTGCTTACCCACTGATCCTCACCACCTAC GAAATCGTCTGCTCCGCAGGCTACGACGAGACCACCCGCGACCAGGTCAAGGACTTCCTGACCGTTGCACTGGACTCTCA GGATGACCAGCTCGAGGCTCTCGGCTACATCCCAGTTACCGGCGAGCACTACGATCGCCTCGTTGCAGCAGTGGAAGCAA TTCAGTAA
Upstream 100 bases:
>100_bases AGGTCTTAGGTTCTTAGATCGTGAGCAATCCGGAGGGAAACTAGCCCGCCTACAGGATCTGCTCAGACGATGTCTTCACT TAAACCGGAAAGGCTTCCCC
Downstream 100 bases:
>100_bases TAAACCGCTGCCGTAGCTTCATGAAACCAGTGTGAAGTTGCACTTTAAGTGAATCGGGCGCCCTCTCCCAGCAATTGGGG GTAGGGCGCCCGATTTTCCT
Product: hypothetical protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP 3; PstS-3 [H]
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MNLTLKRSIALVGAVTAGSFALVACSDSNESDSTSSSAASTGSSDAASIEGLSGVTGQLVAEGASSQQSAMDYFGIRYSE AVSGASLAYTPSGSGSGRTNFAAGQVAFGGSDSAMKDDQAAEAEARCNGNEAWHLPFVIGPVAVAYNLPGVDTLNLDTNT IAQIFKGEITKWNDEAIASQNEGTDLPDQDISVLYRSEESGTSDNFQKFLGASTDIWETEGQQFPTEVGSGAQGSNGVAS EASNIEGAITYVEAGFANQSGLGVANIDFGSGPVKLNAESVGVALGALDFLTEGHNMVVDTDAMFAMNEAGAYPLILTTY EIVCSAGYDETTRDQVKDFLTVALDSQDDQLEALGYIPVTGEHYDRLVAAVEAIQ
Sequences:
>Translated_375_residues MNLTLKRSIALVGAVTAGSFALVACSDSNESDSTSSSAASTGSSDAASIEGLSGVTGQLVAEGASSQQSAMDYFGIRYSE AVSGASLAYTPSGSGSGRTNFAAGQVAFGGSDSAMKDDQAAEAEARCNGNEAWHLPFVIGPVAVAYNLPGVDTLNLDTNT IAQIFKGEITKWNDEAIASQNEGTDLPDQDISVLYRSEESGTSDNFQKFLGASTDIWETEGQQFPTEVGSGAQGSNGVAS EASNIEGAITYVEAGFANQSGLGVANIDFGSGPVKLNAESVGVALGALDFLTEGHNMVVDTDAMFAMNEAGAYPLILTTY EIVCSAGYDETTRDQVKDFLTVALDSQDDQLEALGYIPVTGEHYDRLVAAVEAIQ >Mature_375_residues MNLTLKRSIALVGAVTAGSFALVACSDSNESDSTSSSAASTGSSDAASIEGLSGVTGQLVAEGASSQQSAMDYFGIRYSE AVSGASLAYTPSGSGSGRTNFAAGQVAFGGSDSAMKDDQAAEAEARCNGNEAWHLPFVIGPVAVAYNLPGVDTLNLDTNT IAQIFKGEITKWNDEAIASQNEGTDLPDQDISVLYRSEESGTSDNFQKFLGASTDIWETEGQQFPTEVGSGAQGSNGVAS EASNIEGAITYVEAGFANQSGLGVANIDFGSGPVKLNAESVGVALGALDFLTEGHNMVVDTDAMFAMNEAGAYPLILTTY EIVCSAGYDETTRDQVKDFLTVALDSQDDQLEALGYIPVTGEHYDRLVAAVEAIQ
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=282, Percent_Identity=30.4964539007092, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 38775; Mature: 38775
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTLKRSIALVGAVTAGSFALVACSDSNESDSTSSSAASTGSSDAASIEGLSGVTGQLV CCEEHHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHH AEGASSQQSAMDYFGIRYSEAVSGASLAYTPSGSGSGRTNFAAGQVAFGGSDSAMKDDQA HCCCCCHHHHHHHHCCCHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCHH AEAEARCNGNEAWHLPFVIGPVAVAYNLPGVDTLNLDTNTIAQIFKGEITKWNDEAIASQ HHHHHHCCCCCEEECCEEECCEEEEECCCCCEEECCCHHHHHHHHHCCCCCCCCHHHCCC NEGTDLPDQDISVLYRSEESGTSDNFQKFLGASTDIWETEGQQFPTEVGSGAQGSNGVAS CCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC EASNIEGAITYVEAGFANQSGLGVANIDFGSGPVKLNAESVGVALGALDFLTEGHNMVVD CCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHCCCCEEEE TDAMFAMNEAGAYPLILTTYEIVCSAGYDETTRDQVKDFLTVALDSQDDQLEALGYIPVT CCHHEEECCCCCCEEEEEEEEHHEECCCCCCHHHHHHHHHEEEECCCCCCEEEEEEEECC GEHYDRLVAAVEAIQ CHHHHHHHHHHHHCC >Mature Secondary Structure MNLTLKRSIALVGAVTAGSFALVACSDSNESDSTSSSAASTGSSDAASIEGLSGVTGQLV CCEEHHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHH AEGASSQQSAMDYFGIRYSEAVSGASLAYTPSGSGSGRTNFAAGQVAFGGSDSAMKDDQA HCCCCCHHHHHHHHCCCHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCHH AEAEARCNGNEAWHLPFVIGPVAVAYNLPGVDTLNLDTNTIAQIFKGEITKWNDEAIASQ HHHHHHCCCCCEEECCEEECCEEEEECCCCCEEECCCHHHHHHHHHCCCCCCCCHHHCCC NEGTDLPDQDISVLYRSEESGTSDNFQKFLGASTDIWETEGQQFPTEVGSGAQGSNGVAS CCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC EASNIEGAITYVEAGFANQSGLGVANIDFGSGPVKLNAESVGVALGALDFLTEGHNMVVD CCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHCCCCEEEE TDAMFAMNEAGAYPLILTTYEIVCSAGYDETTRDQVKDFLTVALDSQDDQLEALGYIPVT CCHHEEECCCCCCEEEEEEEEHHEECCCCCCHHHHHHHHHEEEECCCCCCEEEEEEEECC GEHYDRLVAAVEAIQ CHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA