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The map label for this gene is dedA [C]

Identifier: 145296431

GI number: 145296431

Start: 2581989

End: 2582726

Strand: Direct

Name: dedA [C]

Synonym: cgR_2345

Alternate gene names: 145296431

Gene position: 2581989-2582726 (Clockwise)

Preceding gene: 145296430

Following gene: 145296433

Centisome position: 77.91

GC content: 53.25

Gene sequence:

>738_bases
ATGGTTTTTACTCTTGCGGACTCCGTCTCCCAGGTTGCGCTAGGCCCGTCCTGGCTGGACCCCATGGAACTTCTTTCCGG
CTCCGGCCCGTTCGGTGGCTTCATTCTTCCGGCGATGCTTGCGATTGTCTTTATCGAATCAGGCCTACTTTTCCCACTTC
TACCAGGTGATTCTCTTCTTTTCACCGGTGGTCTCCTAGCCAACCAGGCTGACCCTTTTGCACCGCTGTGGCTGGTGCTG
ATCCTCTGCCCTATCGCTGCGATTCTGGGTGATCAGGTGGGCTACTGGATTGGCCACAAGTTCCACCCTCGTCTGGTTAA
TCGTCCGGATGGCAGGATTTTCAAACAGGAATACCTTAAGCAGACTGAGGATTTCTTTGAAAAGCACGGCCCTGTGACGA
TTATTTTGTGCCGTTTCGTGCCGATCGTGCGTACTTACGCACCTTTGGTGGCAGGCATGGCTGGCATGCGTTACCGCACG
TTCTTTATTTACAACGTGATCGGTGGCATTTTGTGGGGTTCCGGCGTGGTGGCTTTGGGCGCTGCGTTGGGTCAGTTCGA
TTTCGTCCGCAACAATATTGATCTGATTTTCTTGCTGATCGTGTTCATTTCGGTGGTTCCTGGTTTGATTGGCATGGCCC
GCAAGCTCGCAGATGGCCGCAAACAAACCAACACCGAGCCTATCAACACCGAAACCCAAACAGCCCCACTAGAACCTCAG
GAAGCCCCTAAAAACTAG

Upstream 100 bases:

>100_bases
TACAACACCAGACCACCCCGACCCTGAATAAACCCCTATTTTTCTAAAAGTCACACTTTGCCATGTAGAAATTCAGCCAA
CCAGGAGTACTCTTTCCACC

Downstream 100 bases:

>100_bases
TCTTTCCGGTCAGCCAGTTCGATGCGTGGTCGTACGTCCACGTTGGTGATCTGGGTGGTTTCGCCAGCGTCAATCACGAA
TCTGATTGCGTTGGCGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MVFTLADSVSQVALGPSWLDPMELLSGSGPFGGFILPAMLAIVFIESGLLFPLLPGDSLLFTGGLLANQADPFAPLWLVL
ILCPIAAILGDQVGYWIGHKFHPRLVNRPDGRIFKQEYLKQTEDFFEKHGPVTIILCRFVPIVRTYAPLVAGMAGMRYRT
FFIYNVIGGILWGSGVVALGAALGQFDFVRNNIDLIFLLIVFISVVPGLIGMARKLADGRKQTNTEPINTETQTAPLEPQ
EAPKN

Sequences:

>Translated_245_residues
MVFTLADSVSQVALGPSWLDPMELLSGSGPFGGFILPAMLAIVFIESGLLFPLLPGDSLLFTGGLLANQADPFAPLWLVL
ILCPIAAILGDQVGYWIGHKFHPRLVNRPDGRIFKQEYLKQTEDFFEKHGPVTIILCRFVPIVRTYAPLVAGMAGMRYRT
FFIYNVIGGILWGSGVVALGAALGQFDFVRNNIDLIFLLIVFISVVPGLIGMARKLADGRKQTNTEPINTETQTAPLEPQ
EAPKN
>Mature_245_residues
MVFTLADSVSQVALGPSWLDPMELLSGSGPFGGFILPAMLAIVFIESGLLFPLLPGDSLLFTGGLLANQADPFAPLWLVL
ILCPIAAILGDQVGYWIGHKFHPRLVNRPDGRIFKQEYLKQTEDFFEKHGPVTIILCRFVPIVRTYAPLVAGMAGMRYRT
FFIYNVIGGILWGSGVVALGAALGQFDFVRNNIDLIFLLIVFISVVPGLIGMARKLADGRKQTNTEPINTETQTAPLEPQ
EAPKN

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=188, Percent_Identity=43.6170212765958, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1789384, Length=173, Percent_Identity=33.5260115606936, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789481, Length=158, Percent_Identity=32.2784810126582, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 26771; Mature: 26771

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFTLADSVSQVALGPSWLDPMELLSGSGPFGGFILPAMLAIVFIESGLLFPLLPGDSLL
CEEECCHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEE
FTGGLLANQADPFAPLWLVLILCPIAAILGDQVGYWIGHKFHPRLVNRPDGRIFKQEYLK
EECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
QTEDFFEKHGPVTIILCRFVPIVRTYAPLVAGMAGMRYRTFFIYNVIGGILWGSGVVALG
HHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
AALGQFDFVRNNIDLIFLLIVFISVVPGLIGMARKLADGRKQTNTEPINTETQTAPLEPQ
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCC
EAPKN
CCCCC
>Mature Secondary Structure
MVFTLADSVSQVALGPSWLDPMELLSGSGPFGGFILPAMLAIVFIESGLLFPLLPGDSLL
CEEECCHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEE
FTGGLLANQADPFAPLWLVLILCPIAAILGDQVGYWIGHKFHPRLVNRPDGRIFKQEYLK
EECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
QTEDFFEKHGPVTIILCRFVPIVRTYAPLVAGMAGMRYRTFFIYNVIGGILWGSGVVALG
HHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
AALGQFDFVRNNIDLIFLLIVFISVVPGLIGMARKLADGRKQTNTEPINTETQTAPLEPQ
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCC
EAPKN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]