| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296430
Identifier: 145296430
GI number: 145296430
Start: 2580230
End: 2581780
Strand: Direct
Name: 145296430
Synonym: cgR_2344
Alternate gene names: NA
Gene position: 2580230-2581780 (Clockwise)
Preceding gene: 145296429
Following gene: 145296431
Centisome position: 77.85
GC content: 58.74
Gene sequence:
>1551_bases ATGAGCATCACCACACACGTCCAAGCACTCACCACAGCACTCAACGCCATCGACAACCATTTGGCCAGCATGCTTGACCA CGGTGTCACCCCAGACCAATACAAGGCCATTGAGCCCGACCTCATCGCCCTAGAACACACCATCAACCACCACGCCACCA TCGCCGCCCAAACCACCGCCCTCGCCGAACGCACCAATGCTGCGCAGTCGATTGGCTCCACCCACCTCATCGACTACCTC ACCACCACCTTCGGCCTATCCAAAGCACGCGCCCACCACCGCATCAATCTCGCCCACTCCCTCTACCCCATACCGAAGCC AAACCCTGGATCTAGCAACGGCGGTAATGGTGGCAATCCCGATGGCGGTCCTGATGGTGGCGACTCGGGTGATGACGACT CCGGCGATGATGACCCCGACCCCGAACCGGACAAGCCTGAAGACGGCAAACCTGATGGTGATAAGCCCCGTGGGCCACGG ATCAGCGCGGAAAAACACGCCATCATCACCGACGAACTCGCCCGCCTCAACCCGAATACCACACCCAGCGCCGAGGAGCT ACGCACCCAAGCCCTGAGTCAAGCGATCTGGCGTACCCCAGAAGACCTCCGCACGTGGCTACGCCACCAGGTCACCACCG CGAACAAAAACAACCCCAACCCCATCACCGCCATGGGCAGGCGCTACCTCTCGGTAGGTAAACCCGATGCCGACAACATG GTCCGCATCAGCGGCCTCGTGCCTGCAGCCACTGCAGCACTGATCACCGCGAACACCGCACCGTTAACCAAACGCGGCAA CCTCGTCGATACCCCAGCAGCAGAAGACATGCGCACCCGAGGGCAACGCCATGCGGACGCGTTGCATCACATCATGGAGA TCTACAACCACGGTATTGTCACCCCAGCTCGTGGTGGAACAGCCAGCATCATCATCTCCATGACCACCGATGATCTTGAT GAGATCAACCACGGTGATCATGGTGATGGCAGTCTGCTCAATAAGCTGTATCCCACGAACACGGGCTACTCATTGAACTT GGCGGAGATCATGAACCTCATCGCCGCGAAATACGACTTCGCCGTGTTGTTGGATGGAGCCACTGGGCAGCCACTGAACG TCAATAGGATGCAGCGCTCAGCGAACCTCACTCAACGCATCGCGTTGTTTGCCTCTGAGTTGGTGTGCTCGGCACCCAAT TGTGATCGCCCGCAGTTAGAGTGCGAGGTTCATCATTTAGATCCCTGGATTCGGGGTGGGTTGACCAACTTGGTCAATCT CACACATCAGTGTTTTAATCACCACCCCCGCAACGATGATTCCAGGAGTGGGGTCAATGGTAAAGGGTTTATGGACCGCG ATCCCGTTACTGGCAGGGTGGGTCATTATCCGGTTGGTGGTGAGGGGCCGGTGTTTAATCGGTCGGCTGCTGCTGATCGT TCCGGTGGTGCGTGGGCCAGGCGTAAACACTATGGCCCACCACCGGAACCGCCGAGCCCGCCGGATCCACCCGAACCGCC TGGTCCTGGTGATGAGGGCAGATTGTTCTAG
Upstream 100 bases:
>100_bases AGGAAAAAGCGTTTGAATAGCACCCTTGCGTTCGAAAGTGTAATCGAGTATAGTGGTTGGTATTAGCACGGGGAACTAAA CGGGAAAGGGGGAAGACACC
Downstream 100 bases:
>100_bases CCGTTGCTAGTGCTGAATCATTGCCATGTTGTTGTGCCCGCTCAGTCACCCCAGTGTGTCTGATACCGGGCACACACCCA TGCCCACACCAACACGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MSITTHVQALTTALNAIDNHLASMLDHGVTPDQYKAIEPDLIALEHTINHHATIAAQTTALAERTNAAQSIGSTHLIDYL TTTFGLSKARAHHRINLAHSLYPIPKPNPGSSNGGNGGNPDGGPDGGDSGDDDSGDDDPDPEPDKPEDGKPDGDKPRGPR ISAEKHAIITDELARLNPNTTPSAEELRTQALSQAIWRTPEDLRTWLRHQVTTANKNNPNPITAMGRRYLSVGKPDADNM VRISGLVPAATAALITANTAPLTKRGNLVDTPAAEDMRTRGQRHADALHHIMEIYNHGIVTPARGGTASIIISMTTDDLD EINHGDHGDGSLLNKLYPTNTGYSLNLAEIMNLIAAKYDFAVLLDGATGQPLNVNRMQRSANLTQRIALFASELVCSAPN CDRPQLECEVHHLDPWIRGGLTNLVNLTHQCFNHHPRNDDSRSGVNGKGFMDRDPVTGRVGHYPVGGEGPVFNRSAAADR SGGAWARRKHYGPPPEPPSPPDPPEPPGPGDEGRLF
Sequences:
>Translated_516_residues MSITTHVQALTTALNAIDNHLASMLDHGVTPDQYKAIEPDLIALEHTINHHATIAAQTTALAERTNAAQSIGSTHLIDYL TTTFGLSKARAHHRINLAHSLYPIPKPNPGSSNGGNGGNPDGGPDGGDSGDDDSGDDDPDPEPDKPEDGKPDGDKPRGPR ISAEKHAIITDELARLNPNTTPSAEELRTQALSQAIWRTPEDLRTWLRHQVTTANKNNPNPITAMGRRYLSVGKPDADNM VRISGLVPAATAALITANTAPLTKRGNLVDTPAAEDMRTRGQRHADALHHIMEIYNHGIVTPARGGTASIIISMTTDDLD EINHGDHGDGSLLNKLYPTNTGYSLNLAEIMNLIAAKYDFAVLLDGATGQPLNVNRMQRSANLTQRIALFASELVCSAPN CDRPQLECEVHHLDPWIRGGLTNLVNLTHQCFNHHPRNDDSRSGVNGKGFMDRDPVTGRVGHYPVGGEGPVFNRSAAADR SGGAWARRKHYGPPPEPPSPPDPPEPPGPGDEGRLF >Mature_515_residues SITTHVQALTTALNAIDNHLASMLDHGVTPDQYKAIEPDLIALEHTINHHATIAAQTTALAERTNAAQSIGSTHLIDYLT TTFGLSKARAHHRINLAHSLYPIPKPNPGSSNGGNGGNPDGGPDGGDSGDDDSGDDDPDPEPDKPEDGKPDGDKPRGPRI SAEKHAIITDELARLNPNTTPSAEELRTQALSQAIWRTPEDLRTWLRHQVTTANKNNPNPITAMGRRYLSVGKPDADNMV RISGLVPAATAALITANTAPLTKRGNLVDTPAAEDMRTRGQRHADALHHIMEIYNHGIVTPARGGTASIIISMTTDDLDE INHGDHGDGSLLNKLYPTNTGYSLNLAEIMNLIAAKYDFAVLLDGATGQPLNVNRMQRSANLTQRIALFASELVCSAPNC DRPQLECEVHHLDPWIRGGLTNLVNLTHQCFNHHPRNDDSRSGVNGKGFMDRDPVTGRVGHYPVGGEGPVFNRSAAADRS GGAWARRKHYGPPPEPPSPPDPPEPPGPGDEGRLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 55449; Mature: 55318
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITTHVQALTTALNAIDNHLASMLDHGVTPDQYKAIEPDLIALEHTINHHATIAAQTTA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEHHHHHCCCEEEHHHHHH LAERTNAAQSIGSTHLIDYLTTTFGLSKARAHHRINLAHSLYPIPKPNPGSSNGGNGGNP HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCCCCCCCCCCCCCC DGGPDGGDSGDDDSGDDDPDPEPDKPEDGKPDGDKPRGPRISAEKHAIITDELARLNPNT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC TPSAEELRTQALSQAIWRTPEDLRTWLRHQVTTANKNNPNPITAMGRRYLSVGKPDADNM CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCE VRISGLVPAATAALITANTAPLTKRGNLVDTPAAEDMRTRGQRHADALHHIMEIYNHGIV EEEECCCHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TPARGGTASIIISMTTDDLDEINHGDHGDGSLLNKLYPTNTGYSLNLAEIMNLIAAKYDF CCCCCCCEEEEEEECCCCHHHCCCCCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCE AVLLDGATGQPLNVNRMQRSANLTQRIALFASELVCSAPNCDRPQLECEVHHLDPWIRGG EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHH LTNLVNLTHQCFNHHPRNDDSRSGVNGKGFMDRDPVTGRVGHYPVGGEGPVFNRSAAADR HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGGAWARRKHYGPPPEPPSPPDPPEPPGPGDEGRLF CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SITTHVQALTTALNAIDNHLASMLDHGVTPDQYKAIEPDLIALEHTINHHATIAAQTTA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEHHHHHCCCEEEHHHHHH LAERTNAAQSIGSTHLIDYLTTTFGLSKARAHHRINLAHSLYPIPKPNPGSSNGGNGGNP HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCCCCCCCCCCCCCC DGGPDGGDSGDDDSGDDDPDPEPDKPEDGKPDGDKPRGPRISAEKHAIITDELARLNPNT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC TPSAEELRTQALSQAIWRTPEDLRTWLRHQVTTANKNNPNPITAMGRRYLSVGKPDADNM CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCE VRISGLVPAATAALITANTAPLTKRGNLVDTPAAEDMRTRGQRHADALHHIMEIYNHGIV EEEECCCHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TPARGGTASIIISMTTDDLDEINHGDHGDGSLLNKLYPTNTGYSLNLAEIMNLIAAKYDF CCCCCCCEEEEEEECCCCHHHCCCCCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCE AVLLDGATGQPLNVNRMQRSANLTQRIALFASELVCSAPNCDRPQLECEVHHLDPWIRGG EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHH LTNLVNLTHQCFNHHPRNDDSRSGVNGKGFMDRDPVTGRVGHYPVGGEGPVFNRSAAADR HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGGAWARRKHYGPPPEPPSPPDPPEPPGPGDEGRLF CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]