| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is catD [H]
Identifier: 145296360
GI number: 145296360
Start: 2505677
End: 2506432
Strand: Direct
Name: catD [H]
Synonym: cgR_2275
Alternate gene names: 145296360
Gene position: 2505677-2506432 (Clockwise)
Preceding gene: 145296359
Following gene: 145296361
Centisome position: 75.6
GC content: 59.26
Gene sequence:
>756_bases ATGGCCATTTTGCACAGCGTTTCCTACGGAACTTCCGACAACACCTTGGTGTTCATTGGCTCGTTGGGTTCCACCACCGA CATGTGGCTGCCACAGCTGGATGCCTTGCATAAGGATTTCCGCGTCATCGCTGTTGATCACCGCGGACATGGTCTGTCTG AACTCATCGAAGGCACCCCCACTGTGGCGGATCTGGCGCAGGATGTGCTGGATACCCTCGATGACCTGGGTGTCGGAAGC TTCGGCGTCATCGGACTATCCCTCGGCGGAGCGGTTGCACAATACTTGGCGGCCACCTCTGATCGTGTCACCAAGGCAGC ATTCATGTGTACCGCTGCAAAATTCGGCGAGCCCCAGGGCTGGCTAGATCGCGCCGCAGCGTGCCGCGAAAACGGCACTG GTTCTCTGTCCGAAGCTGTGATCCAGCGCTGGTTCTCCCCCACTTGGTTGGAGAACAACCCAGCGTCCCGCGAGCACTTC GAAGCCATGGTTGCCGGTACCCCATCTGAGGGTTACGCGCTGTGCTGCGAGGCGTTGGCGACCTGGGATTTCACTGATCG TCTGGGAGAAATCACCGTGCCAGTGCTCGCCATCGCAGGTGCCGATGACCCCTCCACTCCTCCAGCAACCGTGCAGATCA TTGCCGATGGCGTTGGCGGCGAGTCCCGCGCAGAGGTACTAAGCCCAGCCGCGCACGTACCAACCGTGGAACGTCCAAAC GAGGTAAATGAACTGCTAGCACAGCATTTCGCTTAA
Upstream 100 bases:
>100_bases CTCACCGCATGCAGCGTGAAAACACTCAGTACGGACTGGCCACCATGTGCATCGGTGGCGGCCAGGGTCTTGCAGCTGTC TTTGAAAAGGAGAACTAAAA
Downstream 100 bases:
>100_bases TGTTGTAGGCATGTTCACAACCAGTCTCCTGCCCCGTCGTCAGTTGTTGCTTAGGCGTTTACTCGCTGAGTTCACCACTG ATCGGCGGGGCAGGTTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MAILHSVSYGTSDNTLVFIGSLGSTTDMWLPQLDALHKDFRVIAVDHRGHGLSELIEGTPTVADLAQDVLDTLDDLGVGS FGVIGLSLGGAVAQYLAATSDRVTKAAFMCTAAKFGEPQGWLDRAAACRENGTGSLSEAVIQRWFSPTWLENNPASREHF EAMVAGTPSEGYALCCEALATWDFTDRLGEITVPVLAIAGADDPSTPPATVQIIADGVGGESRAEVLSPAAHVPTVERPN EVNELLAQHFA
Sequences:
>Translated_251_residues MAILHSVSYGTSDNTLVFIGSLGSTTDMWLPQLDALHKDFRVIAVDHRGHGLSELIEGTPTVADLAQDVLDTLDDLGVGS FGVIGLSLGGAVAQYLAATSDRVTKAAFMCTAAKFGEPQGWLDRAAACRENGTGSLSEAVIQRWFSPTWLENNPASREHF EAMVAGTPSEGYALCCEALATWDFTDRLGEITVPVLAIAGADDPSTPPATVQIIADGVGGESRAEVLSPAAHVPTVERPN EVNELLAQHFA >Mature_250_residues AILHSVSYGTSDNTLVFIGSLGSTTDMWLPQLDALHKDFRVIAVDHRGHGLSELIEGTPTVADLAQDVLDTLDDLGVGSF GVIGLSLGGAVAQYLAATSDRVTKAAFMCTAAKFGEPQGWLDRAAACRENGTGSLSEAVIQRWFSPTWLENNPASREHFE AMVAGTPSEGYALCCEALATWDFTDRLGEITVPVLAIAGADDPSTPPATVQIIADGVGGESRAEVLSPAAHVPTVERPNE VNELLAQHFA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 26476; Mature: 26345
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILHSVSYGTSDNTLVFIGSLGSTTDMWLPQLDALHKDFRVIAVDHRGHGLSELIEGTP CCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCC TVADLAQDVLDTLDDLGVGSFGVIGLSLGGAVAQYLAATSDRVTKAAFMCTAAKFGEPQG CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH WLDRAAACRENGTGSLSEAVIQRWFSPTWLENNPASREHFEAMVAGTPSEGYALCCEALA HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH TWDFTDRLGEITVPVLAIAGADDPSTPPATVQIIADGVGGESRAEVLSPAAHVPTVERPN HCCHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHCCHHCCCCCCCCH EVNELLAQHFA HHHHHHHHHCC >Mature Secondary Structure AILHSVSYGTSDNTLVFIGSLGSTTDMWLPQLDALHKDFRVIAVDHRGHGLSELIEGTP CEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCC TVADLAQDVLDTLDDLGVGSFGVIGLSLGGAVAQYLAATSDRVTKAAFMCTAAKFGEPQG CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH WLDRAAACRENGTGSLSEAVIQRWFSPTWLENNPASREHFEAMVAGTPSEGYALCCEALA HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH TWDFTDRLGEITVPVLAIAGADDPSTPPATVQIIADGVGGESRAEVLSPAAHVPTVERPN HCCHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHCCHHCCCCCCCCH EVNELLAQHFA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]