| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145296353
Identifier: 145296353
GI number: 145296353
Start: 2498794
End: 2499726
Strand: Reverse
Name: 145296353
Synonym: cgR_2268
Alternate gene names: NA
Gene position: 2499726-2498794 (Counterclockwise)
Preceding gene: 145296354
Following gene: 145296349
Centisome position: 75.43
GC content: 55.09
Gene sequence:
>933_bases TTGGCAGGAGTTATCACCGGTTTCGCCATCATCCTGTCGGTCATCGGCGTCGGATTTCTTCTGGCAAAGCTGGGGGTCAT CAATGATGACAAACAGCGCCTGGTGTTAAACCGCATTGCTTTTTATGCGGCCACCCCAGCGCTGCTTTTCAATGTCGTTG CCCAATCAGATCCCAGCGAGTTGATCTCACCGGTGATCGTGGTGACGTTTGTGGCCACCATCGTCACAGCGGCTGTGTAC TGCGTGATTTCGGCGATTTTCTTTAAGAAAGATATAGCCACCACAGCAACAGGAGCTGCGGCTTCTGCCTATGTGAACTC CAACAACATTGGCCTGCCGGTGTCTATCTATGTGCTGGGAACAGGAGCATATGTGGCACCGATTCTAGTCATGCAGATGG TGATTTTCGCGCCCATGATCCTGGCCGCGCTGACCTCTGGTGATGTGAAAGGCTCGCGCGGGCAAAAAATATGGGCCGCA GTGAAAGGTTCACTGCTTAGCCCGATTGTGTTGGCCTCTATCGCAGGCCTGATCGTGTGTCTGTTAGAAATTCAGCTGCC AGCCGCAGTCATGGAACCTACCATCATTTTGGGCGGCGCATCCATTCCGTTGATTCTGATGAGCTTCGGCGCATCATTGC CCTCAACCAACGTGCTGGCTTCCAAGGCGGATCGCCCCAGCGTTCTTACTGCTACTGCGATAAAAATTGTGGGTATGCCC GCCATCACTTGGCTGATCGCCAAGGCGTTTGGTCTGGAGGGCGATTACCTCTACGCCGCTGTTATTTTGGCGGCGCTGCC CGCCGCGCAGAATGTGTACAACTACGCGGCGACGTATCGCAAGGGCGAGATCGTCGCCCGCGATACGGTCTTCCTCACCA CGTTCCTAGCGCTGCTGGGCATGCTAGGAATCGCGGCCCTATTTGGTCGCTAG
Upstream 100 bases:
>100_bases CCGCGAAGACGTCGGTGAAGTCATCATCAACGGTGCCGTCGCCAGGGGCGAAGCCGAACCAGAGATGTTGGAAGCTGTCG CAGAAGAAAAGACCGCGTAG
Downstream 100 bases:
>100_bases GGCTTCAGGCTGCTTTTCGACGGCTACCGCCTGAGTGCGCATCCCAATCAATGCGGTTGCACCGGCAATAACAATCACTG CCACACCAACATACAGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transport Integral Membrane Protein; Integral Membrane Permease; Permease; AEC Family Transporter; ABC Transport System Permease Protein; RHBT Family Transporter
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MAGVITGFAIILSVIGVGFLLAKLGVINDDKQRLVLNRIAFYAATPALLFNVVAQSDPSELISPVIVVTFVATIVTAAVY CVISAIFFKKDIATTATGAAASAYVNSNNIGLPVSIYVLGTGAYVAPILVMQMVIFAPMILAALTSGDVKGSRGQKIWAA VKGSLLSPIVLASIAGLIVCLLEIQLPAAVMEPTIILGGASIPLILMSFGASLPSTNVLASKADRPSVLTATAIKIVGMP AITWLIAKAFGLEGDYLYAAVILAALPAAQNVYNYAATYRKGEIVARDTVFLTTFLALLGMLGIAALFGR
Sequences:
>Translated_310_residues MAGVITGFAIILSVIGVGFLLAKLGVINDDKQRLVLNRIAFYAATPALLFNVVAQSDPSELISPVIVVTFVATIVTAAVY CVISAIFFKKDIATTATGAAASAYVNSNNIGLPVSIYVLGTGAYVAPILVMQMVIFAPMILAALTSGDVKGSRGQKIWAA VKGSLLSPIVLASIAGLIVCLLEIQLPAAVMEPTIILGGASIPLILMSFGASLPSTNVLASKADRPSVLTATAIKIVGMP AITWLIAKAFGLEGDYLYAAVILAALPAAQNVYNYAATYRKGEIVARDTVFLTTFLALLGMLGIAALFGR >Mature_309_residues AGVITGFAIILSVIGVGFLLAKLGVINDDKQRLVLNRIAFYAATPALLFNVVAQSDPSELISPVIVVTFVATIVTAAVYC VISAIFFKKDIATTATGAAASAYVNSNNIGLPVSIYVLGTGAYVAPILVMQMVIFAPMILAALTSGDVKGSRGQKIWAAV KGSLLSPIVLASIAGLIVCLLEIQLPAAVMEPTIILGGASIPLILMSFGASLPSTNVLASKADRPSVLTATAIKIVGMPA ITWLIAKAFGLEGDYLYAAVILAALPAAQNVYNYAATYRKGEIVARDTVFLTTFLALLGMLGIAALFGR
Specific function: Unknown
COG id: COG0679
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32122; Mature: 31991
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGVITGFAIILSVIGVGFLLAKLGVINDDKQRLVLNRIAFYAATPALLFNVVAQSDPSE CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LISPVIVVTFVATIVTAAVYCVISAIFFKKDIATTATGAAASAYVNSNNIGLPVSIYVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCEEEEEEEE TGAYVAPILVMQMVIFAPMILAALTSGDVKGSRGQKIWAAVKGSLLSPIVLASIAGLIVC CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLEIQLPAAVMEPTIILGGASIPLILMSFGASLPSTNVLASKADRPSVLTATAIKIVGMP HHHHHCCHHHHCCEEEECCCHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHCHH AITWLIAKAFGLEGDYLYAAVILAALPAAQNVYNYAATYRKGEIVARDTVFLTTFLALLG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH MLGIAALFGR HHHHHHHHCC >Mature Secondary Structure AGVITGFAIILSVIGVGFLLAKLGVINDDKQRLVLNRIAFYAATPALLFNVVAQSDPSE CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LISPVIVVTFVATIVTAAVYCVISAIFFKKDIATTATGAAASAYVNSNNIGLPVSIYVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCEEEEEEEE TGAYVAPILVMQMVIFAPMILAALTSGDVKGSRGQKIWAAVKGSLLSPIVLASIAGLIVC CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLEIQLPAAVMEPTIILGGASIPLILMSFGASLPSTNVLASKADRPSVLTATAIKIVGMP HHHHHCCHHHHCCEEEECCCHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHCHH AITWLIAKAFGLEGDYLYAAVILAALPAAQNVYNYAATYRKGEIVARDTVFLTTFLALLG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH MLGIAALFGR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA