BacMap

Definition	Corynebacterium glutamicum R chromosome, complete genome.
Accession	NC_009342
Length	3,314,179

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The map label for this gene is dnaJ1 [H]

Identifier: 145296245

GI number: 145296245

Start: 2384348

End: 2385496

Strand: Reverse

Name: dnaJ1 [H]

Synonym: cgR_2162

Alternate gene names: 145296245

Gene position: 2385496-2384348 (Counterclockwise)

Preceding gene: 145296246

Following gene: 145296244

Centisome position: 71.98

GC content: 58.31

Gene sequence:

>1149_bases
GTGGCACGTGACTATTACGGCATTCTCGGCGTCGATCGCAATGCAACCGAATCAGAGATCAAAAAGGCGTACCGAAAGCT
TGCCCGCAAATACCACCCGGACGTAAACCCAGGTGAGGAAGCAGCGGAGAAATTCCGCGAGGCTTCTGTTGCACATGAGG
TACTCACTGATCCGGATAAGCGCCGCATTGTTGATATGGGCGGTGACCCAATGGAGCAAGGCGGCGGAGCTGGCGCTGGT
GGCTTCGGTGGAGGCTTCGGCAGCAGCGGTGGCCTGGGCGATATCTTCGATGCCTTCTTCGGCGGTGGCGCGGGCGGTTC
CCGTGGACCACGTTCCCGCGTGCAGCCAGGCAGTGACACCTTGTGGCGCACCTCCATCACCTTGGAAGAGGCTTACAAGG
GCGCTAAGAAAGATCTCACCCTTGACACCGCAGTGCTGTGTACCAAGTGTCATGGTTCTGGATCTGCATCCGACAAGAAG
CCTGTTACCTGTGGCACCTGTAATGGCGCTGGTGAAATTCAGGAAGTGCAGCGCAGCTTCCTGGGCAACGTCATGACGTC
CCGCCCATGCCACACCTGCGATGGCACCGGTGAGATCATCCCAGATCCTTGCACCGAGTGTGCAGGAGATGGTCGTGTGC
GTGCTCGCCGCGACATCGTGGCTAGCATCCCAGCTGGCATCCAGTCCGGCATGCGCATCCGCATGGCAGGCCAAGGTGAG
GTTGGCGCTGGTGGCGGTCCTGCGGGTGACCTCTACATTGAAGTCATGGTGCGCCCGCACGCCATCTTCACCCGCGATGG
CGACGATCTGCACGCCAGCATCAAGGTTCCAATGTTCGATGCAGCGCTTGGCACCGAATTGGACGTGGAATCCCTCACCG
GCGAAGAAGTGAAAATCACCATCCCTGCAGGTACTCAGCCCAACGATGTGATCACCTTGGATGGTGAAGGCATGTCGAAG
CTGCGCGCAGAAGGCCACGGCAACCTCATGGCGCATGTCGATCTATTTGTGCCAACCGATTTGGATGACCGCACCCGCGA
ATTGCTTGAAGAAATCCGCAACCATCGCAGCGACAACGCTTCCGTGCATCGCGAAGGCGGAGAAGAATCCGGTTTCTTTG
ACAAGCTCCGAAACAAGTTCCGCAAATAA

Upstream 100 bases:

>100_bases
TAAGTATGTTGGTCGTGTGCTCGCTGGCGAATAGCTGCGGGTATAGTTGGCCATTTGTTTTGATTAATCTGTTTAGAAGC
TAAAGGAAGTATCACCCACC

Downstream 100 bases:

>100_bases
TGTCACTGCCAGTATTTATCTCTGATTCCGCAGCCGGACCAGGCGAAACCATTGAGCTCGCCGGTCCGGAAGGCCGGCAC
GCCGTCACCGTCAAACGGAT

Product: chaperone protein DnaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MARDYYGILGVDRNATESEIKKAYRKLARKYHPDVNPGEEAAEKFREASVAHEVLTDPDKRRIVDMGGDPMEQGGGAGAG
GFGGGFGSSGGLGDIFDAFFGGGAGGSRGPRSRVQPGSDTLWRTSITLEEAYKGAKKDLTLDTAVLCTKCHGSGSASDKK
PVTCGTCNGAGEIQEVQRSFLGNVMTSRPCHTCDGTGEIIPDPCTECAGDGRVRARRDIVASIPAGIQSGMRIRMAGQGE
VGAGGGPAGDLYIEVMVRPHAIFTRDGDDLHASIKVPMFDAALGTELDVESLTGEEVKITIPAGTQPNDVITLDGEGMSK
LRAEGHGNLMAHVDLFVPTDLDDRTRELLEEIRNHRSDNASVHREGGEESGFFDKLRNKFRK

Sequences:

>Translated_382_residues
MARDYYGILGVDRNATESEIKKAYRKLARKYHPDVNPGEEAAEKFREASVAHEVLTDPDKRRIVDMGGDPMEQGGGAGAG
GFGGGFGSSGGLGDIFDAFFGGGAGGSRGPRSRVQPGSDTLWRTSITLEEAYKGAKKDLTLDTAVLCTKCHGSGSASDKK
PVTCGTCNGAGEIQEVQRSFLGNVMTSRPCHTCDGTGEIIPDPCTECAGDGRVRARRDIVASIPAGIQSGMRIRMAGQGE
VGAGGGPAGDLYIEVMVRPHAIFTRDGDDLHASIKVPMFDAALGTELDVESLTGEEVKITIPAGTQPNDVITLDGEGMSK
LRAEGHGNLMAHVDLFVPTDLDDRTRELLEEIRNHRSDNASVHREGGEESGFFDKLRNKFRK
>Mature_381_residues
ARDYYGILGVDRNATESEIKKAYRKLARKYHPDVNPGEEAAEKFREASVAHEVLTDPDKRRIVDMGGDPMEQGGGAGAGG
FGGGFGSSGGLGDIFDAFFGGGAGGSRGPRSRVQPGSDTLWRTSITLEEAYKGAKKDLTLDTAVLCTKCHGSGSASDKKP
VTCGTCNGAGEIQEVQRSFLGNVMTSRPCHTCDGTGEIIPDPCTECAGDGRVRARRDIVASIPAGIQSGMRIRMAGQGEV
GAGGGPAGDLYIEVMVRPHAIFTRDGDDLHASIKVPMFDAALGTELDVESLTGEEVKITIPAGTQPNDVITLDGEGMSKL
RAEGHGNLMAHVDLFVPTDLDDRTRELLEEIRNHRSDNASVHREGGEESGFFDKLRNKFRK

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI205360838, Length=408, Percent_Identity=31.1274509803922, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI205360840, Length=354, Percent_Identity=32.7683615819209, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI4504511, Length=362, Percent_Identity=35.0828729281768, Blast_Score=169, Evalue=6e-42,
Organism=Homo sapiens, GI194328758, Length=326, Percent_Identity=36.1963190184049, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI194328760, Length=326, Percent_Identity=36.1963190184049, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI5031741, Length=345, Percent_Identity=32.7536231884058, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI7706495, Length=356, Percent_Identity=31.7415730337079, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI194328762, Length=290, Percent_Identity=31.7241379310345, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI5453690, Length=365, Percent_Identity=25.4794520547945, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI194306642, Length=107, Percent_Identity=44.8598130841121, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI194306640, Length=107, Percent_Identity=44.8598130841121, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI6631085, Length=397, Percent_Identity=24.1813602015113, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI47777312, Length=104, Percent_Identity=45.1923076923077, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI23503241, Length=105, Percent_Identity=46.6666666666667, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI201862587, Length=69, Percent_Identity=55.0724637681159, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI45504382, Length=64, Percent_Identity=59.375, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI201862518, Length=69, Percent_Identity=55.0724637681159, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI56549115, Length=69, Percent_Identity=55.0724637681159, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI72534740, Length=103, Percent_Identity=37.8640776699029, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI9558755, Length=121, Percent_Identity=38.0165289256198, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI17388799, Length=104, Percent_Identity=48.0769230769231, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI4885495, Length=104, Percent_Identity=48.0769230769231, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI39204547, Length=110, Percent_Identity=39.0909090909091, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI5453980, Length=107, Percent_Identity=43.9252336448598, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI22749377, Length=104, Percent_Identity=42.3076923076923, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI21553335, Length=76, Percent_Identity=50, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI88501736, Length=110, Percent_Identity=41.8181818181818, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI27151736, Length=110, Percent_Identity=41.8181818181818, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI29126218, Length=64, Percent_Identity=56.25, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI68077166, Length=76, Percent_Identity=47.3684210526316, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI68077168, Length=76, Percent_Identity=47.3684210526316, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI56687498, Length=66, Percent_Identity=48.4848484848485, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1786197, Length=379, Percent_Identity=41.1609498680739, Blast_Score=264, Evalue=7e-72,
Organism=Escherichia coli, GI1787235, Length=361, Percent_Identity=29.3628808864266, Blast_Score=130, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17553098, Length=360, Percent_Identity=32.5, Blast_Score=171, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17553096, Length=360, Percent_Identity=32.5, Blast_Score=171, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17507263, Length=348, Percent_Identity=33.6206896551724, Blast_Score=134, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI212645553, Length=356, Percent_Identity=31.4606741573034, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17563890, Length=234, Percent_Identity=29.9145299145299, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17554644, Length=99, Percent_Identity=45.4545454545455, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17534355, Length=194, Percent_Identity=32.9896907216495, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17538236, Length=113, Percent_Identity=39.8230088495575, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17568643, Length=76, Percent_Identity=50, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17551190, Length=74, Percent_Identity=52.7027027027027, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17554900, Length=66, Percent_Identity=45.4545454545455, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17510335, Length=74, Percent_Identity=50, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324265, Length=367, Percent_Identity=38.9645776566758, Blast_Score=193, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6323870, Length=368, Percent_Identity=33.9673913043478, Blast_Score=144, Evalue=3e-35,
Organism=Saccharomyces cerevisiae, GI6323119, Length=385, Percent_Identity=28.8311688311688, Blast_Score=128, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6321094, Length=358, Percent_Identity=31.2849162011173, Blast_Score=101, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6323813, Length=111, Percent_Identity=47.7477477477478, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6324103, Length=63, Percent_Identity=52.3809523809524, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6324321, Length=63, Percent_Identity=53.968253968254, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45552813, Length=371, Percent_Identity=32.3450134770889, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI45552811, Length=404, Percent_Identity=30.9405940594059, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI45549272, Length=371, Percent_Identity=32.3450134770889, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI24646562, Length=346, Percent_Identity=36.9942196531792, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24646560, Length=346, Percent_Identity=36.9942196531792, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24646558, Length=346, Percent_Identity=36.9942196531792, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24646556, Length=346, Percent_Identity=36.9942196531792, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI21357547, Length=346, Percent_Identity=36.9942196531792, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI20129487, Length=346, Percent_Identity=32.3699421965318, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24584014, Length=346, Percent_Identity=32.3699421965318, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI19920464, Length=367, Percent_Identity=29.4277929155313, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI85726398, Length=376, Percent_Identity=28.7234042553192, Blast_Score=121, Evalue=9e-28,
Organism=Drosophila melanogaster, GI24658562, Length=382, Percent_Identity=23.5602094240838, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24658555, Length=382, Percent_Identity=23.5602094240838, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI28574949, Length=365, Percent_Identity=26.027397260274, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI18858081, Length=326, Percent_Identity=28.8343558282209, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24654066, Length=67, Percent_Identity=62.6865671641791, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24654070, Length=67, Percent_Identity=62.6865671641791, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24654068, Length=67, Percent_Identity=62.6865671641791, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24654072, Length=67, Percent_Identity=62.6865671641791, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=64.0625, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21355911, Length=89, Percent_Identity=51.685393258427, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24668492, Length=69, Percent_Identity=50.7246376811594, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21358273, Length=115, Percent_Identity=36.5217391304348, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI17737735, Length=64, Percent_Identity=54.6875, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28574723, Length=64, Percent_Identity=54.6875, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24668523, Length=64, Percent_Identity=54.6875, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24641698, Length=65, Percent_Identity=47.6923076923077, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24641696, Length=65, Percent_Identity=47.6923076923077, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 40656; Mature: 40525

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDYYGILGVDRNATESEIKKAYRKLARKYHPDVNPGEEAAEKFREASVAHEVLTDPDK
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCH
RRIVDMGGDPMEQGGGAGAGGFGGGFGSSGGLGDIFDAFFGGGAGGSRGPRSRVQPGSDT
HEEEECCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LWRTSITLEEAYKGAKKDLTLDTAVLCTKCHGSGSASDKKPVTCGTCNGAGEIQEVQRSF
EEEEEEEHHHHHCCCCCCCCCHHHHHEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHH
LGNVMTSRPCHTCDGTGEIIPDPCTECAGDGRVRARRDIVASIPAGIQSGMRIRMAGQGE
HHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCHHHHCCCEEEEECCCC
VGAGGGPAGDLYIEVMVRPHAIFTRDGDDLHASIKVPMFDAALGTELDVESLTGEEVKIT
CCCCCCCCCCEEEEEEECCCEEEECCCCCEEEEEECEEEHHHCCCCCCHHHCCCCEEEEE
IPAGTQPNDVITLDGEGMSKLRAEGHGNLMAHVDLFVPTDLDDRTRELLEEIRNHRSDNA
ECCCCCCCCEEEECCCCHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCC
SVHREGGEESGFFDKLRNKFRK
EEECCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ARDYYGILGVDRNATESEIKKAYRKLARKYHPDVNPGEEAAEKFREASVAHEVLTDPDK
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCH
RRIVDMGGDPMEQGGGAGAGGFGGGFGSSGGLGDIFDAFFGGGAGGSRGPRSRVQPGSDT
HEEEECCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LWRTSITLEEAYKGAKKDLTLDTAVLCTKCHGSGSASDKKPVTCGTCNGAGEIQEVQRSF
EEEEEEEHHHHHCCCCCCCCCHHHHHEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHH
LGNVMTSRPCHTCDGTGEIIPDPCTECAGDGRVRARRDIVASIPAGIQSGMRIRMAGQGE
HHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCHHHHCCCEEEEECCCC
VGAGGGPAGDLYIEVMVRPHAIFTRDGDDLHASIKVPMFDAALGTELDVESLTGEEVKIT
CCCCCCCCCCEEEEEEECCCEEEECCCCCEEEEEECEEEHHHCCCCCCHHHCCCCEEEEE
IPAGTQPNDVITLDGEGMSKLRAEGHGNLMAHVDLFVPTDLDDRTRELLEEIRNHRSDNA
ECCCCCCCCEEEECCCCHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCC
SVHREGGEESGFFDKLRNKFRK
EEECCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]