| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is ybeZ [C]
Identifier: 145296243
GI number: 145296243
Start: 2382548
End: 2383600
Strand: Reverse
Name: ybeZ [C]
Synonym: cgR_2160
Alternate gene names: 145296243
Gene position: 2383600-2382548 (Counterclockwise)
Preceding gene: 145296244
Following gene: 145296242
Centisome position: 71.92
GC content: 55.75
Gene sequence:
>1053_bases TTGAACATTCCGAAAGCAGGCCGAACTAGTACTGTGACTGCCCCGCGAAAAACCCGCACAGAAGTAATCACCACTGTCCT CAATCTAGAACGCACGCTCGCGCAAACCGTTTTAGGAATCAACGACGAAAACCTGCGTGTGTTGGACAATCAAATTGATT GCGATATTCACGTGCGTGGCACCCGCGTGGAACTCACCGGGCCAGCCCACGAAGTCTCCCGCGCCTCGAAAATATTTGAG GAACTGCAGGCGATTGCCCGTCGAGGACATGTGATTAGCCCTGAGACAGTAAAAAATGTCATCAGCATGATTAACGTGGA GACGCCGCAAACCGTCTCTGAAATCTTGACCGGCGATATCCTTGCTCGCCGTGGCAAAGTGATCCGCCCTAAGACGCTTG GCCAAAAGCACTACGTGGACGCGATTGATACCAACACGATTGTGTTCGGTATGGGCCCAGCCGGTTCCGGTAAAACTTAC CTGGCCATGGCAAAAGCCGTCCAAGCGCTGCAATCAAAGCAGGTCAGCCGCATCATCTTGACCCGCCCCGCAGTGGAAGC CGGGGAGAAACTCGGCTTCTTGCCCGGCACCCTGAACGAAAAGATCGACCCCTACCTGCGCCCGCTTCACGACGCGCTGC GCGACATGGTCGAACCAGAAGTCATTCCAAAACTCATGGAAGCCGGCATCGTAGAAGTCGCCCCACTTGCCTACATGCGC GGACGCACCCTCAACGATGCATTCGTGATCCTGGATGAAGCCCAGAACACCACCCCAGCACAGATGAAGATGTTCCTCAC CCGCCTGGGATTCGGTTCCAAAATGGTAGTCACAGGTGACATCACCCAGGTGGACCTCCCAGGAGGCCAAAAATCTGGCC TGCGCCTGGTCCGCCACATCCTGCGCGGAGTAGACGATGTGCACTTCTCTGAGCTCACCTCATCCGACGTGGTCCGCCAC CAACTGGTTGGACACATTGTGGATGCATACGAAGACTATGAAGAACGCGAGGCCCGCGAATTGAAACGCAAACGCCAGGA GACACGGCCATGA
Upstream 100 bases:
>100_bases GGCCCTGAGGTGTTGCGCACTGCCTCCGCAGGCATGGTGGCGCTCGCAGCTATCGGCGTGCTGTCTGACCGCTGGTAACA TTTCTCTGACACAACCTTTC
Downstream 100 bases:
>100_bases GCATTGAAGTATTCAACGAATCAGGATATGACGGCGTCAATGAAGAAATGCTCATTGATGTCCTCTCCTTCGCACTCGGG GAAATGGACATCCACCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MNIPKAGRTSTVTAPRKTRTEVITTVLNLERTLAQTVLGINDENLRVLDNQIDCDIHVRGTRVELTGPAHEVSRASKIFE ELQAIARRGHVISPETVKNVISMINVETPQTVSEILTGDILARRGKVIRPKTLGQKHYVDAIDTNTIVFGMGPAGSGKTY LAMAKAVQALQSKQVSRIILTRPAVEAGEKLGFLPGTLNEKIDPYLRPLHDALRDMVEPEVIPKLMEAGIVEVAPLAYMR GRTLNDAFVILDEAQNTTPAQMKMFLTRLGFGSKMVVTGDITQVDLPGGQKSGLRLVRHILRGVDDVHFSELTSSDVVRH QLVGHIVDAYEDYEEREARELKRKRQETRP
Sequences:
>Translated_350_residues MNIPKAGRTSTVTAPRKTRTEVITTVLNLERTLAQTVLGINDENLRVLDNQIDCDIHVRGTRVELTGPAHEVSRASKIFE ELQAIARRGHVISPETVKNVISMINVETPQTVSEILTGDILARRGKVIRPKTLGQKHYVDAIDTNTIVFGMGPAGSGKTY LAMAKAVQALQSKQVSRIILTRPAVEAGEKLGFLPGTLNEKIDPYLRPLHDALRDMVEPEVIPKLMEAGIVEVAPLAYMR GRTLNDAFVILDEAQNTTPAQMKMFLTRLGFGSKMVVTGDITQVDLPGGQKSGLRLVRHILRGVDDVHFSELTSSDVVRH QLVGHIVDAYEDYEEREARELKRKRQETRP >Mature_350_residues MNIPKAGRTSTVTAPRKTRTEVITTVLNLERTLAQTVLGINDENLRVLDNQIDCDIHVRGTRVELTGPAHEVSRASKIFE ELQAIARRGHVISPETVKNVISMINVETPQTVSEILTGDILARRGKVIRPKTLGQKHYVDAIDTNTIVFGMGPAGSGKTY LAMAKAVQALQSKQVSRIILTRPAVEAGEKLGFLPGTLNEKIDPYLRPLHDALRDMVEPEVIPKLMEAGIVEVAPLAYMR GRTLNDAFVILDEAQNTTPAQMKMFLTRLGFGSKMVVTGDITQVDLPGGQKSGLRLVRHILRGVDDVHFSELTSSDVVRH QLVGHIVDAYEDYEEREARELKRKRQETRP
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=328, Percent_Identity=49.0853658536585, Blast_Score=277, Evalue=8e-76, Organism=Escherichia coli, GI1787257, Length=239, Percent_Identity=43.9330543933054, Blast_Score=181, Evalue=6e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004087 - InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 38803; Mature: 38803
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPKAGRTSTVTAPRKTRTEVITTVLNLERTLAQTVLGINDENLRVLDNQIDCDIHVRG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEC TRVELTGPAHEVSRASKIFEELQAIARRGHVISPETVKNVISMINVETPQTVSEILTGDI EEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH LARRGKVIRPKTLGQKHYVDAIDTNTIVFGMGPAGSGKTYLAMAKAVQALQSKQVSRIIL HHHCCCEECCHHCCCHHHHCEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TRPAVEAGEKLGFLPGTLNEKIDPYLRPLHDALRDMVEPEVIPKLMEAGIVEVAPLAYMR CCCCHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHC GRTLNDAFVILDEAQNTTPAQMKMFLTRLGFGSKMVVTGDITQVDLPGGQKSGLRLVRHI CCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCHHHHHHHHHH LRGVDDVHFSELTSSDVVRHQLVGHIVDAYEDYEEREARELKRKRQETRP HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNIPKAGRTSTVTAPRKTRTEVITTVLNLERTLAQTVLGINDENLRVLDNQIDCDIHVRG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEC TRVELTGPAHEVSRASKIFEELQAIARRGHVISPETVKNVISMINVETPQTVSEILTGDI EEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH LARRGKVIRPKTLGQKHYVDAIDTNTIVFGMGPAGSGKTYLAMAKAVQALQSKQVSRIIL HHHCCCEECCHHCCCHHHHCEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TRPAVEAGEKLGFLPGTLNEKIDPYLRPLHDALRDMVEPEVIPKLMEAGIVEVAPLAYMR CCCCHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHC GRTLNDAFVILDEAQNTTPAQMKMFLTRLGFGSKMVVTGDITQVDLPGGQKSGLRLVRHI CCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCHHHHHHHHHH LRGVDDVHFSELTSSDVVRHQLVGHIVDAYEDYEEREARELKRKRQETRP HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]