| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296189
Identifier: 145296189
GI number: 145296189
Start: 2328025
End: 2329854
Strand: Direct
Name: 145296189
Synonym: cgR_2108
Alternate gene names: NA
Gene position: 2328025-2329854 (Clockwise)
Preceding gene: 145296188
Following gene: 145296191
Centisome position: 70.24
GC content: 54.48
Gene sequence:
>1830_bases ATGGATACAACAATGGGCCAGCATCTAGAAGTGGAAACTAAGTTTTCCGTCAGTGAATCAACTCAGATTCCACAACTTGA GGCTATCGCAGAAGTCGACCACATTGATCGCACCGAAATCCACCAACTAAGCGCTGTTTACTTTGACACCGTAGATTTGC GCCTCACCCGCGCAAAAATTACCCTCCGTCGCCGCACCGGTGGAAACGATGCCGGCTGGCACATTAAGTTCCCCGGAACC ATCGGTCGCCGTGAAGTCCAAGCCCCACTTGATGGCGAAGGCGCAACAGAAACCCTCCCTCCACGTGAGCTCTTGGGACA CATCCGAGCGCTGATCCAAGGCCGTGAGCTGACCCCTATCGCCCAGGTGGATAATGAACGCCACATGTCTTACCTCGCGG ATGAGGACGGCGCAGTCATCGCAGAATTCTGCGACGATCATGTATCCACCGTGTCCCACCTTCCAGGTGGCGTGCGCAAG CAGTGGCGTGAGTGGGAATTCGAACTCGCTGATGGCACCCTCGCCGAAGAAGCCATCTCAGTACTGCTGCAATCTGCACA GTCAGTCCTGACCGCAGCTGGAGCTTTTGTCTCCAACAGCCCATCCAAACTTGTTTCGGCGCTGGACGAATCAGTCAACC ACGCGCCAAAGCCTCCACAGATGGCGCAGCTGGACAAGAATGACCCAGCACGTGGTGTTCTTGCAGCAATCGCAGCCAAC GCCTCAAAGATCGCCGAATACGATCCTCGAGTACGCGCCGATGAATATGATTCAGTCCACCAGATGCGCGTAGCTACCCG AGAACTACGCAGCCACCTCCAAACCTTTGAGGGCATCCTCGGCGGCGAAGATTACCTCAACCTGGAAAAGGAACTGAAGG TTCTCGCCAACATCTTGGGTCGCGCACGCGATGCTGAAGTTGTGGAAGAGCGCCTCAGCAACCTGATTAACACTGAGGTT GGCGACTCCATCGAGGAGGAGACCAAGAAGGAACTGCTTGAAGATCTTGGTGCAGAATACCGTCGTGAGCATGAGCGAGT AGTTCGTGCGCTGGATAATGATCGCTACACTGATCTTCTTCAGGCACTGGAAAACCTCCTTGTTGATCCACCGCTGATCA CAGAAGTCGAAGAACCCGAAGCTACCGAAGCCCCTGAGTCCGCTGAGACTACCGAGTCCACTGACGTCTCTGAAGCAACT GAAGAAGCAGACGCAGAAGCTGAGTCTGTCGGAGAAGCTACTGAGCAGGAAGAATCAGCAGACGCGCCTGAATCTGCAGA TCTGGACGCTCTCGATGAGGAGTACTCCCCTGGTTCCCAAGCGCCGGTGGAGGAGCCGAAGGAACCGAAGAAGGTTGATG CTGCTCTCGTACTTCTAGAGCACCTTGATAAGGCGCACGTGAAGCTCGTCAAGCTGGAAAAGAAGGCTCGCTCACAGTGG GATGATCTCAGCATTCCGATGCTGGAGCGGGAAGAAAACTTCCACAACCTGCGCAAGGCTGCCAAGAAGCTTCGCTACAG TGCTGAGGCAGTGGGCAAAGCAACCACCGTTGAGACGAAGAAACTGTACAAGGCGTGCAGTGGTTTGCAGTCAGTTCTTG GCGATTACCAAGATGCCATTACTTCCCGTGATGAGCTGTTGCGCCGAGCTCAGGTTGCCCGCCGCCAAGGCCGGGATACC TTCGCATACGGAATCCTCTACCAGCACGAACAAACCCTGTCGAGGGAATACCTGACTGGTTATTCCGATGCGTTCAAGAG CGTAGAAAAAGCCTATGCAAAGCTGGCTGAAGATACCGCCAAGCGTTCAAAGAAGAACAAGCGTAAGTAA
Upstream 100 bases:
>100_bases ACATGAGGTGGGCAAAGACAACACAGGTTCCCTATGAAAACGGGGAACCTGTTTCACCTACTTTTTAATCACGCTTCACA ATCACATAAGTCTTTAAAGG
Downstream 100 bases:
>100_bases ACGCAGGCAATAAAAAACTGGGGTCGCATCTGAAAGTGTGCCCCCAGTTTTTTAGTCTTCCTTGTCGTCCCAAATTTCGG CTGCCTTGGTTCGGGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 609; Mature: 609
Protein sequence:
>609_residues MDTTMGQHLEVETKFSVSESTQIPQLEAIAEVDHIDRTEIHQLSAVYFDTVDLRLTRAKITLRRRTGGNDAGWHIKFPGT IGRREVQAPLDGEGATETLPPRELLGHIRALIQGRELTPIAQVDNERHMSYLADEDGAVIAEFCDDHVSTVSHLPGGVRK QWREWEFELADGTLAEEAISVLLQSAQSVLTAAGAFVSNSPSKLVSALDESVNHAPKPPQMAQLDKNDPARGVLAAIAAN ASKIAEYDPRVRADEYDSVHQMRVATRELRSHLQTFEGILGGEDYLNLEKELKVLANILGRARDAEVVEERLSNLINTEV GDSIEEETKKELLEDLGAEYRREHERVVRALDNDRYTDLLQALENLLVDPPLITEVEEPEATEAPESAETTESTDVSEAT EEADAEAESVGEATEQEESADAPESADLDALDEEYSPGSQAPVEEPKEPKKVDAALVLLEHLDKAHVKLVKLEKKARSQW DDLSIPMLEREENFHNLRKAAKKLRYSAEAVGKATTVETKKLYKACSGLQSVLGDYQDAITSRDELLRRAQVARRQGRDT FAYGILYQHEQTLSREYLTGYSDAFKSVEKAYAKLAEDTAKRSKKNKRK
Sequences:
>Translated_609_residues MDTTMGQHLEVETKFSVSESTQIPQLEAIAEVDHIDRTEIHQLSAVYFDTVDLRLTRAKITLRRRTGGNDAGWHIKFPGT IGRREVQAPLDGEGATETLPPRELLGHIRALIQGRELTPIAQVDNERHMSYLADEDGAVIAEFCDDHVSTVSHLPGGVRK QWREWEFELADGTLAEEAISVLLQSAQSVLTAAGAFVSNSPSKLVSALDESVNHAPKPPQMAQLDKNDPARGVLAAIAAN ASKIAEYDPRVRADEYDSVHQMRVATRELRSHLQTFEGILGGEDYLNLEKELKVLANILGRARDAEVVEERLSNLINTEV GDSIEEETKKELLEDLGAEYRREHERVVRALDNDRYTDLLQALENLLVDPPLITEVEEPEATEAPESAETTESTDVSEAT EEADAEAESVGEATEQEESADAPESADLDALDEEYSPGSQAPVEEPKEPKKVDAALVLLEHLDKAHVKLVKLEKKARSQW DDLSIPMLEREENFHNLRKAAKKLRYSAEAVGKATTVETKKLYKACSGLQSVLGDYQDAITSRDELLRRAQVARRQGRDT FAYGILYQHEQTLSREYLTGYSDAFKSVEKAYAKLAEDTAKRSKKNKRK >Mature_609_residues MDTTMGQHLEVETKFSVSESTQIPQLEAIAEVDHIDRTEIHQLSAVYFDTVDLRLTRAKITLRRRTGGNDAGWHIKFPGT IGRREVQAPLDGEGATETLPPRELLGHIRALIQGRELTPIAQVDNERHMSYLADEDGAVIAEFCDDHVSTVSHLPGGVRK QWREWEFELADGTLAEEAISVLLQSAQSVLTAAGAFVSNSPSKLVSALDESVNHAPKPPQMAQLDKNDPARGVLAAIAAN ASKIAEYDPRVRADEYDSVHQMRVATRELRSHLQTFEGILGGEDYLNLEKELKVLANILGRARDAEVVEERLSNLINTEV GDSIEEETKKELLEDLGAEYRREHERVVRALDNDRYTDLLQALENLLVDPPLITEVEEPEATEAPESAETTESTDVSEAT EEADAEAESVGEATEQEESADAPESADLDALDEEYSPGSQAPVEEPKEPKKVDAALVLLEHLDKAHVKLVKLEKKARSQW DDLSIPMLEREENFHNLRKAAKKLRYSAEAVGKATTVETKKLYKACSGLQSVLGDYQDAITSRDELLRRAQVARRQGRDT FAYGILYQHEQTLSREYLTGYSDAFKSVEKAYAKLAEDTAKRSKKNKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008172 - InterPro: IPR007899 - InterPro: IPR004206 [H]
Pfam domain/function: PF05235 CHAD; PF01928 CYTH [H]
EC number: NA
Molecular weight: Translated: 67838; Mature: 67838
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTTMGQHLEVETKFSVSESTQIPQLEAIAEVDHIDRTEIHQLSAVYFDTVDLRLTRAKI CCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEHHHE TLRRRTGGNDAGWHIKFPGTIGRREVQAPLDGEGATETLPPRELLGHIRALIQGRELTPI EEEECCCCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH AQVDNERHMSYLADEDGAVIAEFCDDHVSTVSHLPGGVRKQWREWEFELADGTLAEEAIS HHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHH VLLQSAQSVLTAAGAFVSNSPSKLVSALDESVNHAPKPPQMAQLDKNDPARGVLAAIAAN HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHC ASKIAEYDPRVRADEYDSVHQMRVATRELRSHLQTFEGILGGEDYLNLEKELKVLANILG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHH RARDAEVVEERLSNLINTEVGDSIEEETKKELLEDLGAEYRREHERVVRALDNDRYTDLL CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH QALENLLVDPPLITEVEEPEATEAPESAETTESTDVSEATEEADAEAESVGEATEQEESA HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC DAPESADLDALDEEYSPGSQAPVEEPKEPKKVDAALVLLEHLDKAHVKLVKLEKKARSQW CCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DDLSIPMLEREENFHNLRKAAKKLRYSAEAVGKATTVETKKLYKACSGLQSVLGDYQDAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TSRDELLRRAQVARRQGRDTFAYGILYQHEQTLSREYLTGYSDAFKSVEKAYAKLAEDTA CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRSKKNKRK HHHHHCCCC >Mature Secondary Structure MDTTMGQHLEVETKFSVSESTQIPQLEAIAEVDHIDRTEIHQLSAVYFDTVDLRLTRAKI CCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEHHHE TLRRRTGGNDAGWHIKFPGTIGRREVQAPLDGEGATETLPPRELLGHIRALIQGRELTPI EEEECCCCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH AQVDNERHMSYLADEDGAVIAEFCDDHVSTVSHLPGGVRKQWREWEFELADGTLAEEAIS HHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHH VLLQSAQSVLTAAGAFVSNSPSKLVSALDESVNHAPKPPQMAQLDKNDPARGVLAAIAAN HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHC ASKIAEYDPRVRADEYDSVHQMRVATRELRSHLQTFEGILGGEDYLNLEKELKVLANILG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHH RARDAEVVEERLSNLINTEVGDSIEEETKKELLEDLGAEYRREHERVVRALDNDRYTDLL CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH QALENLLVDPPLITEVEEPEATEAPESAETTESTDVSEATEEADAEAESVGEATEQEESA HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC DAPESADLDALDEEYSPGSQAPVEEPKEPKKVDAALVLLEHLDKAHVKLVKLEKKARSQW CCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DDLSIPMLEREENFHNLRKAAKKLRYSAEAVGKATTVETKKLYKACSGLQSVLGDYQDAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TSRDELLRRAQVARRQGRDTFAYGILYQHEQTLSREYLTGYSDAFKSVEKAYAKLAEDTA CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRSKKNKRK HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]