| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is murC
Identifier: 145296119
GI number: 145296119
Start: 2245155
End: 2246615
Strand: Reverse
Name: murC
Synonym: cgR_2039
Alternate gene names: 145296119
Gene position: 2246615-2245155 (Counterclockwise)
Preceding gene: 145296120
Following gene: 145296118
Centisome position: 67.79
GC content: 56.33
Gene sequence:
>1461_bases GTGACCACTCCACACTTGGATTCTGCACAAGATATTGATCTGTCCCGCGTCCACCTCATCGGTATTGGCGGAGCCGGAAT GTCTGGCGTTGCCCGAATCCTGCTTGCCCGCGGTAAGACAGTCACTGGTTCCGATGCCAAAGATTCCCGCACCTTGCTTC CACTCCGCGCCGTGGGAGCCACCATCGCAGTGGGACACGCCGCGGAAAACCTTGAGCTTTCCGGCGAACTTCCCACCGTC GTGGTGACCTCTTTTGCCGCCATTCCGCAAGACAACCCGGAACTTGTTCGTGCACGTGAAGAAGGCATTCCGGTTATTCG TCGCTCCGATCTGTTGGGCGAATTGCTGGAAGGCTCCACCCAGGTCTTGATCGCGGGTACCCACGGTAAGACCTCCACCA CCTCTATGTCTGTGGTAGCTATGCAGGCAGCGGGCATGGATCCAAGCTTTGCTATCGGCGGACAGCTCAACAAGGCTGGC ACCAATGCGCACCATGGAACTGGTGAGGTCTTTATCGCTGAAGCAGATGAATCTGACGCATCGCTGCTGCGCTACAAGCC AAATGTTGCAGTGGTCACCAATGTGGAACCAGACCACCTGGACTTCTTTAAAACCCCTGAAGCCTACTTCCAAGTGTTCG ACGATTTCGCAGGACGCATCACCCCGAACGGCAAGCTGGTTGTGTGCCTGAACGATCCTCACGCAGCGGAGCTGGGGGAG AGGTCTGTCCGCAAGGGTATCAAGACTGTTGGTTATGGTACCGCTGACGCAGTACAGGCACACCCTGAGGTTCCAGCGAT GGCTACCATCGTGGATTCCCAAGTTGTCGCAGAAGGCACCCGCGCCACCATCAACATCGATGGACAGGAAGTATCTGTGA TTCTTCAAATCCCTGGTGATCACATGGTACTCAACGGTGCAGCCGCCCTGCTGGCCGGATACCTGGTGGGTGGGGACGTC GACAAGCTTGTTGAAGGCTTGTCGGATTTCTCCGGCGTGCGACGCCGCTTTGAGTTCCACGGTGCTATCGAGGGCGGCAA ATTTAATGGCGCGGCTATTTATGATGATTACGCACACCACCCAACGGAAGTAACTGCAGTGCTCAGCGCTGCGCGCACCC GGGTGAAGGCCGCTGGAAAGGGCCGTGTCATCGTCGCGTTCCAACCACATTTGTACTCACGCACCATGGAATTCCAAAAG GAGTTCGCGGAGGCACTGTCACTGGCAGACGCTGCCGTGGTGCTCGAGATTTACGGAGCGCGCGAACAACCGGTGGATGG CGTGTCCTCGGAAATCATCACCGATGCGATGACCATTCCAGTGGTGTACGAACCTAATTTCTCTGCAGTCCCAGAACGCA TTGCAGAAATCGCAGGACCTAATGACATCGTGCTCACCATGGGTGCAGGTTCCGTGACCATGCTTGCTCCAGAAATCCTG GATCAGCTGCAAAACAATTAG
Upstream 100 bases:
>100_bases GCAGGTAACGCGTCCACGGTGATTGCAGACATGATTGCTGCAACTATCAAAAGCCAACACAACTAAAACGACCAGCTCAA CGCAAAGGAATAGTTTAAAG
Downstream 100 bases:
>100_bases GACGTAAGTGAACAAGGCAGGACTAGCGTGAACAAAAAAGTCATCGCCATTGTTGTGGGTGTGGTTGTTGTCCTCGTGGC AATCCTGGGCGTTGTTGCCT
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MTTPHLDSAQDIDLSRVHLIGIGGAGMSGVARILLARGKTVTGSDAKDSRTLLPLRAVGATIAVGHAAENLELSGELPTV VVTSFAAIPQDNPELVRAREEGIPVIRRSDLLGELLEGSTQVLIAGTHGKTSTTSMSVVAMQAAGMDPSFAIGGQLNKAG TNAHHGTGEVFIAEADESDASLLRYKPNVAVVTNVEPDHLDFFKTPEAYFQVFDDFAGRITPNGKLVVCLNDPHAAELGE RSVRKGIKTVGYGTADAVQAHPEVPAMATIVDSQVVAEGTRATINIDGQEVSVILQIPGDHMVLNGAAALLAGYLVGGDV DKLVEGLSDFSGVRRRFEFHGAIEGGKFNGAAIYDDYAHHPTEVTAVLSAARTRVKAAGKGRVIVAFQPHLYSRTMEFQK EFAEALSLADAAVVLEIYGAREQPVDGVSSEIITDAMTIPVVYEPNFSAVPERIAEIAGPNDIVLTMGAGSVTMLAPEIL DQLQNN
Sequences:
>Translated_486_residues MTTPHLDSAQDIDLSRVHLIGIGGAGMSGVARILLARGKTVTGSDAKDSRTLLPLRAVGATIAVGHAAENLELSGELPTV VVTSFAAIPQDNPELVRAREEGIPVIRRSDLLGELLEGSTQVLIAGTHGKTSTTSMSVVAMQAAGMDPSFAIGGQLNKAG TNAHHGTGEVFIAEADESDASLLRYKPNVAVVTNVEPDHLDFFKTPEAYFQVFDDFAGRITPNGKLVVCLNDPHAAELGE RSVRKGIKTVGYGTADAVQAHPEVPAMATIVDSQVVAEGTRATINIDGQEVSVILQIPGDHMVLNGAAALLAGYLVGGDV DKLVEGLSDFSGVRRRFEFHGAIEGGKFNGAAIYDDYAHHPTEVTAVLSAARTRVKAAGKGRVIVAFQPHLYSRTMEFQK EFAEALSLADAAVVLEIYGAREQPVDGVSSEIITDAMTIPVVYEPNFSAVPERIAEIAGPNDIVLTMGAGSVTMLAPEIL DQLQNN >Mature_485_residues TTPHLDSAQDIDLSRVHLIGIGGAGMSGVARILLARGKTVTGSDAKDSRTLLPLRAVGATIAVGHAAENLELSGELPTVV VTSFAAIPQDNPELVRAREEGIPVIRRSDLLGELLEGSTQVLIAGTHGKTSTTSMSVVAMQAAGMDPSFAIGGQLNKAGT NAHHGTGEVFIAEADESDASLLRYKPNVAVVTNVEPDHLDFFKTPEAYFQVFDDFAGRITPNGKLVVCLNDPHAAELGER SVRKGIKTVGYGTADAVQAHPEVPAMATIVDSQVVAEGTRATINIDGQEVSVILQIPGDHMVLNGAAALLAGYLVGGDVD KLVEGLSDFSGVRRRFEFHGAIEGGKFNGAAIYDDYAHHPTEVTAVLSAARTRVKAAGKGRVIVAFQPHLYSRTMEFQKE FAEALSLADAAVVLEIYGAREQPVDGVSSEIITDAMTIPVVYEPNFSAVPERIAEIAGPNDIVLTMGAGSVTMLAPEILD QLQNN
Specific function: Cell wall formation
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family
Homologues:
Organism=Escherichia coli, GI1786279, Length=470, Percent_Identity=37.2340425531915, Blast_Score=234, Evalue=7e-63, Organism=Escherichia coli, GI1790680, Length=484, Percent_Identity=28.3057851239669, Blast_Score=157, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURC_CORGB (A4QFM2)
Other databases:
- EMBL: AP009044 - RefSeq: YP_001138940.1 - ProteinModelPortal: A4QFM2 - SMR: A4QFM2 - STRING: A4QFM2 - GeneID: 4994415 - GenomeReviews: AP009044_GR - KEGG: cgt:cgR_2039 - eggNOG: COG0773 - HOGENOM: HBG476594 - OMA: EPNFSAV - ProtClustDB: PRK00421 - GO: GO:0005737 - HAMAP: MF_00046 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR01082
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.8
Molecular weight: Translated: 51200; Mature: 51068
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPHLDSAQDIDLSRVHLIGIGGAGMSGVARILLARGKTVTGSDAKDSRTLLPLRAVGA CCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCEECCCCCCCCCEEEEHHHCCC TIAVGHAAENLELSGELPTVVVTSFAAIPQDNPELVRAREEGIPVIRRSDLLGELLEGST EEEECCCCCCCEECCCCCCCEEHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHHHHHCCCC QVLIAGTHGKTSTTSMSVVAMQAAGMDPSFAIGGQLNKAGTNAHHGTGEVFIAEADESDA EEEEEECCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCC SLLRYKPNVAVVTNVEPDHLDFFKTPEAYFQVFDDFAGRITPNGKLVVCLNDPHAAELGE EEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEECCCCEEEEEECCCCHHHHHH RSVRKGIKTVGYGTADAVQAHPEVPAMATIVDSQVVAEGTRATINIDGQEVSVILQIPGD HHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHCCHHHCCCCEEEEEECCCEEEEEEEECCC HMVLNGAAALLAGYLVGGDVDKLVEGLSDFSGVRRRFEFHGAIEGGKFNGAAIYDDYAHH EEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEEEECCCCCC PTEVTAVLSAARTRVKAAGKGRVIVAFQPHLYSRTMEFQKEFAEALSLADAAVVLEIYGA CHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC REQPVDGVSSEIITDAMTIPVVYEPNFSAVPERIAEIAGPNDIVLTMGAGSVTMLAPEIL CCCCCCCCHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCEEEECHHHH DQLQNN HHHHCC >Mature Secondary Structure TTPHLDSAQDIDLSRVHLIGIGGAGMSGVARILLARGKTVTGSDAKDSRTLLPLRAVGA CCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCEECCCCCCCCCEEEEHHHCCC TIAVGHAAENLELSGELPTVVVTSFAAIPQDNPELVRAREEGIPVIRRSDLLGELLEGST EEEECCCCCCCEECCCCCCCEEHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHHHHHCCCC QVLIAGTHGKTSTTSMSVVAMQAAGMDPSFAIGGQLNKAGTNAHHGTGEVFIAEADESDA EEEEEECCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCC SLLRYKPNVAVVTNVEPDHLDFFKTPEAYFQVFDDFAGRITPNGKLVVCLNDPHAAELGE EEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEECCCCEEEEEECCCCHHHHHH RSVRKGIKTVGYGTADAVQAHPEVPAMATIVDSQVVAEGTRATINIDGQEVSVILQIPGD HHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHCCHHHCCCCEEEEEECCCEEEEEEEECCC HMVLNGAAALLAGYLVGGDVDKLVEGLSDFSGVRRRFEFHGAIEGGKFNGAAIYDDYAHH EEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEEEECCCCCC PTEVTAVLSAARTRVKAAGKGRVIVAFQPHLYSRTMEFQKEFAEALSLADAAVVLEIYGA CHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC REQPVDGVSSEIITDAMTIPVVYEPNFSAVPERIAEIAGPNDIVLTMGAGSVTMLAPEIL CCCCCCCCHHHHHHHHEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCEEEECHHHH DQLQNN HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA