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The map label for this gene is yfiH [C]

Identifier: 145296116

GI number: 145296116

Start: 2242121

End: 2242861

Strand: Reverse

Name: yfiH [C]

Synonym: cgR_2036

Alternate gene names: 145296116

Gene position: 2242861-2242121 (Counterclockwise)

Preceding gene: 145296117

Following gene: 145296115

Centisome position: 67.67

GC content: 58.97

Gene sequence:

>741_bases
ATGGATAGTCTTGACCCCCGCAACCGCCCCGTCCGCAAGGTCTTCACGACCCGTGCCGGCGGGGTTTCGCAGTCTCCGTA
TGCTACCTTCAACCTTGGTGATCACGTCGGCGACGATCCTCAAGCTGTGGCATCCAACCGCAATCGCTTGGCTGACATCA
TCGGTTTGTCCCCAGACAAGGTGGTGTACATGGAGCAAATTCATTCCAATACCGTCACAGTCATTGATGAAGCCCCAGCG
GATGGACAGGCTGTAGAGGCCACCGATGCGCTAGTGACCACGCAACGAGGACTAGCGCTGGCCGTTTTGGTTGCTGATTG
CGTGCCAGTGCTGCTGTCAGACACCGACGCTGGCGTGATTGCGGCAGTGCATGCAGGCCGCATGGGAGCCCGCAACGGTA
TCGTGGCTAAAACCATAGCGAAGATGGAGGAGCTCGGCGCGAAACCCAGCCGCATTCATGCGCTCATGGGTGCAGCGGCA
TCGGGTGCGAACTACGAGGTCCCAGAGGCCATGGCGCGCGATGTGGAAGCCAAACTTCCAGGTTCCCTTGCGCGTACGAC
AAAAGGCACCACTGGGCTGGATATCCGCGCAGGTCTGCTGCGTCAAATGCTCAGCCTGGGTGTGCAAATGATTGATTCTG
ATCCACGTTGCACCATCGAAGACGAAGATCTGTTTTCTTACCGCCGCGAAGGCACGACAGGCCGCCAGGCCGGCGTGGTG
TGGCTGCCAAAGGAGGCATAA

Upstream 100 bases:

>100_bases
CCGTGATGATCGTCGTGACGATCGCCGCGATGACCGCGGAGACGACCTGGATGTACCCAGCTTCCTCCAGTAATTAAGAA
GGAGAATAGACTTATCCACT

Downstream 100 bases:

>100_bases
ATTGGAGCGCCGCGAAGAGCTGCAGGTACGACTGCAGCAGGTGCAAGCGCGTATCGACGCGACCCTCAACGAACACAACC
GCCCCGAGGGCAGTGTACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MDSLDPRNRPVRKVFTTRAGGVSQSPYATFNLGDHVGDDPQAVASNRNRLADIIGLSPDKVVYMEQIHSNTVTVIDEAPA
DGQAVEATDALVTTQRGLALAVLVADCVPVLLSDTDAGVIAAVHAGRMGARNGIVAKTIAKMEELGAKPSRIHALMGAAA
SGANYEVPEAMARDVEAKLPGSLARTTKGTTGLDIRAGLLRQMLSLGVQMIDSDPRCTIEDEDLFSYRREGTTGRQAGVV
WLPKEA

Sequences:

>Translated_246_residues
MDSLDPRNRPVRKVFTTRAGGVSQSPYATFNLGDHVGDDPQAVASNRNRLADIIGLSPDKVVYMEQIHSNTVTVIDEAPA
DGQAVEATDALVTTQRGLALAVLVADCVPVLLSDTDAGVIAAVHAGRMGARNGIVAKTIAKMEELGAKPSRIHALMGAAA
SGANYEVPEAMARDVEAKLPGSLARTTKGTTGLDIRAGLLRQMLSLGVQMIDSDPRCTIEDEDLFSYRREGTTGRQAGVV
WLPKEA
>Mature_246_residues
MDSLDPRNRPVRKVFTTRAGGVSQSPYATFNLGDHVGDDPQAVASNRNRLADIIGLSPDKVVYMEQIHSNTVTVIDEAPA
DGQAVEATDALVTTQRGLALAVLVADCVPVLLSDTDAGVIAAVHAGRMGARNGIVAKTIAKMEELGAKPSRIHALMGAAA
SGANYEVPEAMARDVEAKLPGSLARTTKGTTGLDIRAGLLRQMLSLGVQMIDSDPRCTIEDEDLFSYRREGTTGRQAGVV
WLPKEA

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=238, Percent_Identity=27.3109243697479, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI190194372, Length=238, Percent_Identity=27.3109243697479, Blast_Score=75, Evalue=5e-14,
Organism=Escherichia coli, GI1788945, Length=244, Percent_Identity=36.8852459016393, Blast_Score=126, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26018; Mature: 26018

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLDPRNRPVRKVFTTRAGGVSQSPYATFNLGDHVGDDPQAVASNRNRLADIIGLSPDK
CCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHCCCCCC
VVYMEQIHSNTVTVIDEAPADGQAVEATDALVTTQRGLALAVLVADCVPVLLSDTDAGVI
EEHHHHHCCCEEEEEECCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEE
AAVHAGRMGARNGIVAKTIAKMEELGAKPSRIHALMGAAASGANYEVPEAMARDVEAKLP
EEEHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
GSLARTTKGTTGLDIRAGLLRQMLSLGVQMIDSDPRCTIEDEDLFSYRREGTTGRQAGVV
CHHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCEECCHHHHHHHHCCCCCCCCCEE
WLPKEA
EECCCC
>Mature Secondary Structure
MDSLDPRNRPVRKVFTTRAGGVSQSPYATFNLGDHVGDDPQAVASNRNRLADIIGLSPDK
CCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHCCCCCC
VVYMEQIHSNTVTVIDEAPADGQAVEATDALVTTQRGLALAVLVADCVPVLLSDTDAGVI
EEHHHHHCCCEEEEEECCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEE
AAVHAGRMGARNGIVAKTIAKMEELGAKPSRIHALMGAAASGANYEVPEAMARDVEAKLP
EEEHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
GSLARTTKGTTGLDIRAGLLRQMLSLGVQMIDSDPRCTIEDEDLFSYRREGTTGRQAGVV
CHHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCEECCHHHHHHHHCCCCCCCCCEE
WLPKEA
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9240446; 9738885; 12948626 [H]