| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296065
Identifier: 145296065
GI number: 145296065
Start: 2184832
End: 2186034
Strand: Direct
Name: 145296065
Synonym: cgR_1987
Alternate gene names: NA
Gene position: 2184832-2186034 (Clockwise)
Preceding gene: 145296046
Following gene: 145296068
Centisome position: 65.92
GC content: 51.12
Gene sequence:
>1203_bases ATGGATTTCACCTCTGTGAATGATCGAAACGTCCCTGCACCCAACACCTCCATTCCTTTCCCAGTTGACCTGAATCGAGT GACCGAGGCTGTTGATTCCTTGGGCTACCACTATTTGAGCTCAGAAGATCGCATCATCGTGCCGTGGCAAGATCACCGCA TTTCGATGTACTTCAGCCACGAATCAGGGCAAATGCTCACCATCCTTGGTCGCATGCGCCTTGATTTGGACATGTTTGCC ATCAACGATGCGGCGCGAGCTGTCACTGAATGGAATGCCGAACGCATCGGGCCAACAGCCCTCGTCCATCTGGGCAATGC CGGCGAAGTGGAATTGAAATTCCGCACGACCATCTGCATCGATGAAGGGTTAAGCACCCAACAGCTACGCCAATTCATCA ACCTGTCCTTGGACACCACCGCCATGGCTGTGACCTATATTCTGGAGCGTTTTTCAGAACTTAATTTCAGCGACACCGGA AGCCCTGACGACACGAACAATGCCGATGAACTCAGCGACGAACAAGACCAAGCAGATCTTGTAGAGAAAATCCGGGGGCT GTACGTTCCCACTCCAGTTGAAGAGCTCATCGAATCCCTAGAAGACGCAGAGTGGGAAGAATCAGACATGGCAGACGAGG ATGCAGAAGACGACTACCTAGACGATGACTCAGAAATCGAATGGGAAACAGACGATGACTACTTCGAACCCGAAGAAGTC GACATGGACGAACTCCTCAACGGCTTCCTCGAAGATTCTGACATCCCCCAGGAAGTCACCTTGGAACGCATTCGAGCACA ACTGCATGCCATCGGCGTGGTAAAAACCAGCGGCGAAGACGATTTCATCATCGCGTGGATCAACGAAGTGTTTTTAGGCT TCTTCGTTGATAATGGCCCCACTTTCCTGGTGAAAGGTCACTGGGATCCCAGCATGGACCCCACACGCGACTTCATGAAA CTGTTCATGATGTGCAATCAGTGGAACGAAAACTCTCTGACTACCAAAGCTTTTTGCCATACTGATGACAAGGGCCTCCA GGTCCGGGTAGAGTTCGCGGTCTCTGTCGTTGAAGGCCTCAACGACGATCAACTACAGCACAACATCGCACTGTCAATTC ATCATATTTTGCAAGCGATTGATTCCATCAGCACAGAAGCCACTGGATCATCAGCGGTGGAATGGCCGGAGAAAAACCGC TGA
Upstream 100 bases:
>100_bases GGGTACATCAGAGTTCATTTGAATTAGACTTAAAACTTAAAATGACCACCCCAGATTTAGCTGAATTAAACCCGCTTTCA CCTTTGAGATACTGGAAGGA
Downstream 100 bases:
>100_bases TCATTAAGGTCTTCCAAGAATGGTCGCTTAGCTTTAGTGCCCACACACCTGATCATGAGGTGTGTGGGTACTTTGGTTTG CGCACATCTAGCTCCTAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MDFTSVNDRNVPAPNTSIPFPVDLNRVTEAVDSLGYHYLSSEDRIIVPWQDHRISMYFSHESGQMLTILGRMRLDLDMFA INDAARAVTEWNAERIGPTALVHLGNAGEVELKFRTTICIDEGLSTQQLRQFINLSLDTTAMAVTYILERFSELNFSDTG SPDDTNNADELSDEQDQADLVEKIRGLYVPTPVEELIESLEDAEWEESDMADEDAEDDYLDDDSEIEWETDDDYFEPEEV DMDELLNGFLEDSDIPQEVTLERIRAQLHAIGVVKTSGEDDFIIAWINEVFLGFFVDNGPTFLVKGHWDPSMDPTRDFMK LFMMCNQWNENSLTTKAFCHTDDKGLQVRVEFAVSVVEGLNDDQLQHNIALSIHHILQAIDSISTEATGSSAVEWPEKNR
Sequences:
>Translated_400_residues MDFTSVNDRNVPAPNTSIPFPVDLNRVTEAVDSLGYHYLSSEDRIIVPWQDHRISMYFSHESGQMLTILGRMRLDLDMFA INDAARAVTEWNAERIGPTALVHLGNAGEVELKFRTTICIDEGLSTQQLRQFINLSLDTTAMAVTYILERFSELNFSDTG SPDDTNNADELSDEQDQADLVEKIRGLYVPTPVEELIESLEDAEWEESDMADEDAEDDYLDDDSEIEWETDDDYFEPEEV DMDELLNGFLEDSDIPQEVTLERIRAQLHAIGVVKTSGEDDFIIAWINEVFLGFFVDNGPTFLVKGHWDPSMDPTRDFMK LFMMCNQWNENSLTTKAFCHTDDKGLQVRVEFAVSVVEGLNDDQLQHNIALSIHHILQAIDSISTEATGSSAVEWPEKNR >Mature_400_residues MDFTSVNDRNVPAPNTSIPFPVDLNRVTEAVDSLGYHYLSSEDRIIVPWQDHRISMYFSHESGQMLTILGRMRLDLDMFA INDAARAVTEWNAERIGPTALVHLGNAGEVELKFRTTICIDEGLSTQQLRQFINLSLDTTAMAVTYILERFSELNFSDTG SPDDTNNADELSDEQDQADLVEKIRGLYVPTPVEELIESLEDAEWEESDMADEDAEDDYLDDDSEIEWETDDDYFEPEEV DMDELLNGFLEDSDIPQEVTLERIRAQLHAIGVVKTSGEDDFIIAWINEVFLGFFVDNGPTFLVKGHWDPSMDPTRDFMK LFMMCNQWNENSLTTKAFCHTDDKGLQVRVEFAVSVVEGLNDDQLQHNIALSIHHILQAIDSISTEATGSSAVEWPEKNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45421; Mature: 45421
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFTSVNDRNVPAPNTSIPFPVDLNRVTEAVDSLGYHYLSSEDRIIVPWQDHRISMYFSH CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCEEEEECCCCEEEEEEEC ESGQMLTILGRMRLDLDMFAINDAARAVTEWNAERIGPTALVHLGNAGEVELKFRTTICI CCCCEEEEEHHHHHCEEEEEHHHHHHHHHHCCHHHCCCEEEEEECCCCEEEEEEEEEEEE DEGLSTQQLRQFINLSLDTTAMAVTYILERFSELNFSDTGSPDDTNNADELSDEQDQADL CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHH VEKIRGLYVPTPVEELIESLEDAEWEESDMADEDAEDDYLDDDSEIEWETDDDYFEPEEV HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC DMDELLNGFLEDSDIPQEVTLERIRAQLHAIGVVKTSGEDDFIIAWINEVFLGFFVDNGP CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCEEEEEHHHHHEEEEECCCC TFLVKGHWDPSMDPTRDFMKLFMMCNQWNENSLTTKAFCHTDDKGLQVRVEFAVSVVEGL EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHCC NDDQLQHNIALSIHHILQAIDSISTEATGSSAVEWPEKNR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDFTSVNDRNVPAPNTSIPFPVDLNRVTEAVDSLGYHYLSSEDRIIVPWQDHRISMYFSH CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCEEEEECCCCEEEEEEEC ESGQMLTILGRMRLDLDMFAINDAARAVTEWNAERIGPTALVHLGNAGEVELKFRTTICI CCCCEEEEEHHHHHCEEEEEHHHHHHHHHHCCHHHCCCEEEEEECCCCEEEEEEEEEEEE DEGLSTQQLRQFINLSLDTTAMAVTYILERFSELNFSDTGSPDDTNNADELSDEQDQADL CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHH VEKIRGLYVPTPVEELIESLEDAEWEESDMADEDAEDDYLDDDSEIEWETDDDYFEPEEV HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC DMDELLNGFLEDSDIPQEVTLERIRAQLHAIGVVKTSGEDDFIIAWINEVFLGFFVDNGP CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCEEEEEHHHHHEEEEECCCC TFLVKGHWDPSMDPTRDFMKLFMMCNQWNENSLTTKAFCHTDDKGLQVRVEFAVSVVEGL EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHCC NDDQLQHNIALSIHHILQAIDSISTEATGSSAVEWPEKNR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA