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The map label for this gene is 145295779

Identifier: 145295779

GI number: 145295779

Start: 1899409

End: 1899774

Strand: Reverse

Name: 145295779

Synonym: cgR_1704

Alternate gene names: NA

Gene position: 1899774-1899409 (Counterclockwise)

Preceding gene: 145295780

Following gene: 145295778

Centisome position: 57.32

GC content: 53.55

Gene sequence:

>366_bases
ATGGACATCCTTTTCCTCATAGTTCTTCTAGCCATTTTTATCGTTCCCACCTTCCTCATGAGCCGTCGCCAGCGCGCACG
GATGACTGAAATCCAAAAGCTGCAGGACTCTGTCGTCCCAGGCGACCGCATTGTCACCACCGCGGGCCAGCACGCAACGG
TCATCTCCACCACTGCAGAAACCGTTGATCTAGAGATCGCGCCGGGTATGATCAGCACTTTTGAAAAGCTTGCTATCGTG
CGTGTGCTGTCCAAGGCCAATGAACCTCAGGTGTTGGATGAGCCGACGCTGTTTGATCAGCCAGAAGACGATCAGCCGAA
CGATGGTTTTGATGGACGCACTGACGGACATCCTGAGAATCGTTAG

Upstream 100 bases:

>100_bases
ATGGAGACACCTGGGGCTGGAACCACCAGAAGGCACCATCGGCGATTATTAGCCACCTTAGGTGGCCAGGATGTTCCATG
GTCTGGCAAACTAGCTAACC

Downstream 100 bases:

>100_bases
AAATTAATAATAATTCAGCACCCTTTTGCTCATTACTTTCTGTGGGCAAGGGTGCTGTTTATATATCTACTCATATTGGT
AGCCAGACTCACAGGGGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MDILFLIVLLAIFIVPTFLMSRRQRARMTEIQKLQDSVVPGDRIVTTAGQHATVISTTAETVDLEIAPGMISTFEKLAIV
RVLSKANEPQVLDEPTLFDQPEDDQPNDGFDGRTDGHPENR

Sequences:

>Translated_121_residues
MDILFLIVLLAIFIVPTFLMSRRQRARMTEIQKLQDSVVPGDRIVTTAGQHATVISTTAETVDLEIAPGMISTFEKLAIV
RVLSKANEPQVLDEPTLFDQPEDDQPNDGFDGRTDGHPENR
>Mature_121_residues
MDILFLIVLLAIFIVPTFLMSRRQRARMTEIQKLQDSVVPGDRIVTTAGQHATVISTTAETVDLEIAPGMISTFEKLAIV
RVLSKANEPQVLDEPTLFDQPEDDQPNDGFDGRTDGHPENR

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML0486 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 13476; Mature: 13476

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILFLIVLLAIFIVPTFLMSRRQRARMTEIQKLQDSVVPGDRIVTTAGQHATVISTTAE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCH
TVDLEIAPGMISTFEKLAIVRVLSKANEPQVLDEPTLFDQPEDDQPNDGFDGRTDGHPEN
HEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
R
C
>Mature Secondary Structure
MDILFLIVLLAIFIVPTFLMSRRQRARMTEIQKLQDSVVPGDRIVTTAGQHATVISTTAE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCH
TVDLEIAPGMISTFEKLAIVRVLSKANEPQVLDEPTLFDQPEDDQPNDGFDGRTDGHPEN
HEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]