| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is apt
Identifier: 145295775
GI number: 145295775
Start: 1893364
End: 1893921
Strand: Reverse
Name: apt
Synonym: cgR_1700
Alternate gene names: 145295775
Gene position: 1893921-1893364 (Counterclockwise)
Preceding gene: 145295776
Following gene: 145295774
Centisome position: 57.15
GC content: 54.12
Gene sequence:
>558_bases GTGAGCGATCAAGCTCTAAGCACCTTCGACAGGGCACGTGAGGCCCTAGACAAGAAAACCCGATATGTGCAGGATTTCCC AGAAAAGGGTGTGCTTTTTGAAGACCTCACCCCGGTCTTGGGCGATGCAGAATCATTTGCGGCCGTGGTGGACGCCATGG CTGAAGCTGCAGAAAAACTGAATGCAGAAATCATCGGTGGCTTAGATGCGCGCGGATTCCTCCTCGGATCCGCTGTTGCC TACAAACTCGGTCTGGGTGTGCTGGCGATCCGCAAGAAGGGAAAGCTCCCCCCACCTGTGGTGACCCAGGAGTATGAACT TGAATACGGCACTGCAGCACTCGAGCTGCCCAGTGAAGGAATCGACATTGCTGGTAAAAACATCGTTTTGATCGACGATG TGCTGGCAACCGGTGGCACCTTGGGCGCTGCACGTAAACTAATTGAATCGTGTGACGGACATGTTTCCGGATATGTTCTT GCCATTGAGGTCCCAGGCCTCGGCGGTAGGGATAATCTTGGTGCTAGGCCCGTCATTGTGGTCAGAGATCCTCAGTAG
Upstream 100 bases:
>100_bases GTTTGTGATAGATCGCACAGTCGGTAACGTTGTTGTTAATACAGACCTAGCCGGTATCGGTTGGAACATGGACCGTTGGT CCAGAAGTGAGGAATAAGTA
Downstream 100 bases:
>100_bases AAGGATCGAAAGAAAGGCGGCAGGAAAATGAGTCTGGAGCGCAACACGCAAAAATCTTCCATGGGTGTGCGAAGCATGTC AGCCAGGCTTGCCCGCAGCC
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSDQALSTFDRAREALDKKTRYVQDFPEKGVLFEDLTPVLGDAESFAAVVDAMAEAAEKLNAEIIGGLDARGFLLGSAVA YKLGLGVLAIRKKGKLPPPVVTQEYELEYGTAALELPSEGIDIAGKNIVLIDDVLATGGTLGAARKLIESCDGHVSGYVL AIEVPGLGGRDNLGARPVIVVRDPQ
Sequences:
>Translated_185_residues MSDQALSTFDRAREALDKKTRYVQDFPEKGVLFEDLTPVLGDAESFAAVVDAMAEAAEKLNAEIIGGLDARGFLLGSAVA YKLGLGVLAIRKKGKLPPPVVTQEYELEYGTAALELPSEGIDIAGKNIVLIDDVLATGGTLGAARKLIESCDGHVSGYVL AIEVPGLGGRDNLGARPVIVVRDPQ >Mature_184_residues SDQALSTFDRAREALDKKTRYVQDFPEKGVLFEDLTPVLGDAESFAAVVDAMAEAAEKLNAEIIGGLDARGFLLGSAVAY KLGLGVLAIRKKGKLPPPVVTQEYELEYGTAALELPSEGIDIAGKNIVLIDDVLATGGTLGAARKLIESCDGHVSGYVLA IEVPGLGGRDNLGARPVIVVRDPQ
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=173, Percent_Identity=39.3063583815029, Blast_Score=125, Evalue=2e-29, Organism=Homo sapiens, GI71773201, Length=132, Percent_Identity=41.6666666666667, Blast_Score=107, Evalue=6e-24, Organism=Escherichia coli, GI1786675, Length=160, Percent_Identity=38.75, Blast_Score=115, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17509087, Length=171, Percent_Identity=38.0116959064327, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6323619, Length=165, Percent_Identity=36.969696969697, Blast_Score=100, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6320649, Length=165, Percent_Identity=33.9393939393939, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI17136334, Length=156, Percent_Identity=42.9487179487179, Blast_Score=106, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_CORGB (A4QEM8)
Other databases:
- EMBL: AP009044 - RefSeq: YP_001138596.1 - ProteinModelPortal: A4QEM8 - SMR: A4QEM8 - STRING: A4QEM8 - GeneID: 4992068 - GenomeReviews: AP009044_GR - KEGG: cgt:cgR_1700 - eggNOG: COG0503 - HOGENOM: HBG703830 - OMA: ELCAING - ProtClustDB: PRK02304 - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 19478; Mature: 19346
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQALSTFDRAREALDKKTRYVQDFPEKGVLFEDLTPVLGDAESFAAVVDAMAEAAEKL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHC NAEIIGGLDARGFLLGSAVAYKLGLGVLAIRKKGKLPPPVVTQEYELEYGTAALELPSEG CHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEECCCCCEEEECCCCC IDIAGKNIVLIDDVLATGGTLGAARKLIESCDGHVSGYVLAIEVPGLGGRDNLGARPVIV CCCCCCCEEEEEHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEE VRDPQ EECCC >Mature Secondary Structure SDQALSTFDRAREALDKKTRYVQDFPEKGVLFEDLTPVLGDAESFAAVVDAMAEAAEKL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHC NAEIIGGLDARGFLLGSAVAYKLGLGVLAIRKKGKLPPPVVTQEYELEYGTAALELPSEG CHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEECCCCCEEEECCCCC IDIAGKNIVLIDDVLATGGTLGAARKLIESCDGHVSGYVLAIEVPGLGGRDNLGARPVIV CCCCCCCEEEEEHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEE VRDPQ EECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA