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The map label for this gene is ocd2 [H]

Identifier: 145295703

GI number: 145295703

Start: 1812332

End: 1813480

Strand: Reverse

Name: ocd2 [H]

Synonym: cgR_1630

Alternate gene names: 145295703

Gene position: 1813480-1812332 (Counterclockwise)

Preceding gene: 145295704

Following gene: 145295702

Centisome position: 54.72

GC content: 58.57

Gene sequence:

>1149_bases
ATGACCGCAACCTACACCACTGAAACCGCTATCAATTTCTTGTTCTTGAGCGAACCGGACATGATCGCGGCCGGAGTCAA
AGACGTCGCGCAATGCGTCGATGTCATGGAGGAAACGCTCGTGCTCTTGGCGCAGGGCGACTACAAAATGGCCGGTTTGA
ACTCCAACTCGCATGGCGCGATGATCACCTTCCCGGAAAACCCAGAATTTGAAGGCATGCCCAAGGACGGCCCCGACCGC
CGATTCATGGCGATGCCCGCATACCTCGGCGGGCGATTCAAAAACACCGGCGTGAAGTGGTACGGATCTAACGCGGAAAA
CAAGGCCTCAGGCTTGCCTCGCTCGATCCACACCTTCGTCCTCAACGACACGGTCACCGGTGCACCGAAGGCCATCATGT
CCGCGAACCTGCTGTCCGCCTACCGCACCGGCGCGGTTCCCGGCGTGGGCGTGAAGCACTTAGCGGTCGCCGACGCGACA
ACCTTGGCCGTCGTCGGACCTGGTGTCATGGCGAAAACCATCACCGAAGCGTGCATCGCAGAGCGCCCAGGAATCACCAC
CATCAAGATCAAGGGACGCAGCGAACGCGGCATCAACGCCTTTGCAACATGGGCGTTGGAAAAATTCCCCGAGATCGAAG
TGGTCGCCGTCGGATCTGAAGAAGACGTGGTCAAAGACGCCGACATCGTCATCGCCGCCACCACCACGGACGCCGCTGGC
TCCTCCGCCTTCCCATACTTCAAAAAAGAATGGCTCAAGCCGGGCGCATTGCTGCTGCTTCCAGCCGCAGGTCGCTTCGA
CGACGCTTATTTGCTTGACGACGCCCGCCTCGTTGTTGACTACATGGGGCTCTACGAAGCCTGGGCAGAAGAATACGGCC
CACAGGCCTACCAACTCCTCGGCATTCCAGGAACCCACTGGTACGACCTGGCGCTGCAAGGAAAACTCGACCTTGCAAAG
ATTTCCCAGATTGGCGATATCTGCTCCGGCAAGCTACCCGGACGCACCAACGATGAGGAAATCATCCTCTATTCCGTCGG
CGGCATGCCAGTAGAAGACGTCGCCTGGGCAACCCAAGTGTATGAAAACGCCCTGGAAAAAGGCATCGGCACCACATTGA
ACCTGTGGGAATCACCCGCACTGGCTTGA

Upstream 100 bases:

>100_bases
GCACCAATTTCGGACCTGAAATCCCCGAGGAAACCGTGCCCGACGCCGTGCAGGTGGGCGTCGATAAGCAAAAAATCGCT
GATACTCGAAAGGCCTCAAA

Downstream 100 bases:

>100_bases
GAGAAGAAACAACAATGAAAATTGCGGTAATCGGCCTTGGATCAACCGGCTCCATGGCACTGTGGCACTTAAGCAACATC
CCCGGTGTGGAAGCCATCGG

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MTATYTTETAINFLFLSEPDMIAAGVKDVAQCVDVMEETLVLLAQGDYKMAGLNSNSHGAMITFPENPEFEGMPKDGPDR
RFMAMPAYLGGRFKNTGVKWYGSNAENKASGLPRSIHTFVLNDTVTGAPKAIMSANLLSAYRTGAVPGVGVKHLAVADAT
TLAVVGPGVMAKTITEACIAERPGITTIKIKGRSERGINAFATWALEKFPEIEVVAVGSEEDVVKDADIVIAATTTDAAG
SSAFPYFKKEWLKPGALLLLPAAGRFDDAYLLDDARLVVDYMGLYEAWAEEYGPQAYQLLGIPGTHWYDLALQGKLDLAK
ISQIGDICSGKLPGRTNDEEIILYSVGGMPVEDVAWATQVYENALEKGIGTTLNLWESPALA

Sequences:

>Translated_382_residues
MTATYTTETAINFLFLSEPDMIAAGVKDVAQCVDVMEETLVLLAQGDYKMAGLNSNSHGAMITFPENPEFEGMPKDGPDR
RFMAMPAYLGGRFKNTGVKWYGSNAENKASGLPRSIHTFVLNDTVTGAPKAIMSANLLSAYRTGAVPGVGVKHLAVADAT
TLAVVGPGVMAKTITEACIAERPGITTIKIKGRSERGINAFATWALEKFPEIEVVAVGSEEDVVKDADIVIAATTTDAAG
SSAFPYFKKEWLKPGALLLLPAAGRFDDAYLLDDARLVVDYMGLYEAWAEEYGPQAYQLLGIPGTHWYDLALQGKLDLAK
ISQIGDICSGKLPGRTNDEEIILYSVGGMPVEDVAWATQVYENALEKGIGTTLNLWESPALA
>Mature_381_residues
TATYTTETAINFLFLSEPDMIAAGVKDVAQCVDVMEETLVLLAQGDYKMAGLNSNSHGAMITFPENPEFEGMPKDGPDRR
FMAMPAYLGGRFKNTGVKWYGSNAENKASGLPRSIHTFVLNDTVTGAPKAIMSANLLSAYRTGAVPGVGVKHLAVADATT
LAVVGPGVMAKTITEACIAERPGITTIKIKGRSERGINAFATWALEKFPEIEVVAVGSEEDVVKDADIVIAATTTDAAGS
SAFPYFKKEWLKPGALLLLPAAGRFDDAYLLDDARLVVDYMGLYEAWAEEYGPQAYQLLGIPGTHWYDLALQGKLDLAKI
SQIGDICSGKLPGRTNDEEIILYSVGGMPVEDVAWATQVYENALEKGIGTTLNLWESPALA

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 40971; Mature: 40840

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATYTTETAINFLFLSEPDMIAAGVKDVAQCVDVMEETLVLLAQGDYKMAGLNSNSHGA
CCCEEECHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCCE
MITFPENPEFEGMPKDGPDRRFMAMPAYLGGRFKNTGVKWYGSNAENKASGLPRSIHTFV
EEECCCCCCCCCCCCCCCCCEEEECHHHHCCEEECCCEEEECCCCCCHHCCCCCEEEEEE
LNDTVTGAPKAIMSANLLSAYRTGAVPGVGVKHLAVADATTLAVVGPGVMAKTITEACIA
EECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCEEEEECCCHHHHHHHHHHHH
ERPGITTIKIKGRSERGINAFATWALEKFPEIEVVAVGSEEDVVKDADIVIAATTTDAAG
CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCCCC
SSAFPYFKKEWLKPGALLLLPAAGRFDDAYLLDDARLVVDYMGLYEAWAEEYGPQAYQLL
CCCCCHHHHHHCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEE
GIPGTHWYDLALQGKLDLAKISQIGDICSGKLPGRTNDEEIILYSVGGMPVEDVAWATQV
ECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH
YENALEKGIGTTLNLWESPALA
HHHHHHHCCCCEEECCCCCCCC
>Mature Secondary Structure 
TATYTTETAINFLFLSEPDMIAAGVKDVAQCVDVMEETLVLLAQGDYKMAGLNSNSHGA
CCEEECHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCCE
MITFPENPEFEGMPKDGPDRRFMAMPAYLGGRFKNTGVKWYGSNAENKASGLPRSIHTFV
EEECCCCCCCCCCCCCCCCCEEEECHHHHCCEEECCCEEEECCCCCCHHCCCCCEEEEEE
LNDTVTGAPKAIMSANLLSAYRTGAVPGVGVKHLAVADATTLAVVGPGVMAKTITEACIA
EECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCEEEEECCCHHHHHHHHHHHH
ERPGITTIKIKGRSERGINAFATWALEKFPEIEVVAVGSEEDVVKDADIVIAATTTDAAG
CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCCCC
SSAFPYFKKEWLKPGALLLLPAAGRFDDAYLLDDARLVVDYMGLYEAWAEEYGPQAYQLL
CCCCCHHHHHHCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEE
GIPGTHWYDLALQGKLDLAKISQIGDICSGKLPGRTNDEEIILYSVGGMPVEDVAWATQV
ECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH
YENALEKGIGTTLNLWESPALA
HHHHHHHCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]