| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is secA2
Identifier: 145295573
GI number: 145295573
Start: 1661516
End: 1663807
Strand: Direct
Name: secA2
Synonym: cgR_1500
Alternate gene names: 145295573
Gene position: 1661516-1663807 (Clockwise)
Preceding gene: 145295568
Following gene: 145295574
Centisome position: 50.13
GC content: 57.98
Gene sequence:
>2292_bases GTGGCCGGTTTTGATTGGTTTTGGAAGGCCCTTGGCGGCAAATCGGGCAGAAACCAAAAACGTAGCGTGGCAATTGTCAA TCAGGCAGAAAACCATGTAGCGGAATTAGACGCGCTGGATGATGTTGCATTGGCGCAGCGTGCCAAGGATCTAGCCAGTG GTGGACGCATTGACAATCATGCGGAATTCCTCGCCATTTTGGGTGTGGCATCGCAGCGGACATTGGGGCTGAAGCCGTAT CCGGCGCAATCACAGGCGGTGTTGCGTCTCATTGAAGGCGATGTGGTGCACATGGCTACCGGTGAGGGCAAGACTTTGGT GGGCGCGATGGCGGCCACCGGTCTGGGGTTGATGGGCAAGCGAGTCCATTCGATTACCGTCAATGATTATTTGGCGGTGC GCGATGCCGAATGGATGCGGCCATTGGTCGAATTTTTCGGTCTGAGCGTGGCGAGCATCAGCGAGAAGATGGATGCAGGG GAGCGTCGACAAGCATATAAAGCCGCAATTGTCTACGGACCTGTCAATGAAATCGGCTTTGACGTGCTGCGTGATCAGCT AATTACCCGGCGCGAAGACGCCGTGCAGCATGGCGCCGACGTCGCGATTATCGATGAGGCCGATTCCGTGCTTGTCGACG AGGCCCTGGTGCCACTCGTCCTCGCCGGCAACCAGCCCGGCCATGCGCCGCGCGGCAAAATCACCGATGTGGTGCGCTCG CTGAAAGAAAACGACGATTACACCATCGACGATGATCGTCGCAACGTCTTCCTCACCGACAAGGGTGCCGCCAAATTAGA GCAGCAGCTGGGCATCAGCAGCCTCTACGACGATGAGCACGTCGGCTCGACGCTCGTGCAGGTCAACCTCGCCCTCCACG CGCAGGCACTGCTCATCCGCGACATCCACTACATCGTCCGCGACAGCAAGGTCTTGCTTATCGACGCCTCCCGCGGCCGT GTCGCCGACCTGCAGCGCTGGCCCGACGGCCTGCAAGCAGCAGTGGAGGCCAAGGAAGGTCTCGCGGTTTCTGAAGGCGG CAAGATCCTTGACACCATCACACTTCAGGCGTTGATTGGTCGCTACCCAATGGCATGCGGCATGACAGGTACCGCCGTGG AGGCAACCAATCAGCTACGCACCTTCTATGACTTGCATGTTTCTGTCATTGAGCGCAATCATCCGCTGAAGCGCTTTGAT GAAGCTGACCGTATCTACGCCACCATGGCGGAGAAAAACCGCGCCATCATCGATGAAATCGCACTCCTTCACAGCACGGG GCAGCCAGTCCTGGTGGGTACCCACGATGTGGCAGAGTCGGAAGAACTCGCCACTGCACTGCGTGAACTCAACATCGAAG TAAGCGTTCTCAACGCCAAGAATGATGCCGAAGAAGCCCAGATCATCGCAGAGGCTGGCGATATTGGACGAGTGACCGTT TCCACTCAGATGGCCGGCCGCGGTACCGATATTCGCCTCGGTGGCGCCGATGAAGCCGACTACGATGAAGTGGTGAAACT CGGTGGACTCGCCGTTATCGGCACCGCCCGCCACCGTTCTCAGCGCCTGGACAACCAGCTGCGCGGACGTGCGGGACGAC AAGGAGATCCAGGCCTGAGCCTTTTCTTTGTCTCCCTCGATGATGATGTGGTGGTCTCAGGCGGGTCAGGGGAGAGCGTG AGTGCGCAACCCGATGCCACCGGGCTGATTGACTCAGATCGCATCCGCGATTGGGTCGGACACTGCCAGCGCGTCACCGA AGGACAGCTGCTGGAAATCCACTCCCAGAGCTGGAATTACAACAAGCTCCTTGCCGATCAACGCGTGATCATTGACGAGC GCCGCGAACGCCTCCTCGACACCGCCTTAGCGTGGGAGGAACTGGCACAGCATGCACCAGCGCGGGCTGCAGAGCTTGAA GACCTTGATCAGTCCGTGAGGGAACAGGCAGGACGAGACATCATGCTGTACCACCTCGATTACAACTGGTCAGAGCACCT CGCGTTGATGGATGATGTCCGCGAATCCATTCACCTGCGCGCCATCGCCAGGGAAACCCCCCTTGATGAATACCACCGCA TCGCTGTGCGTGAATTCAAGGATTTGGCACAACGCGCTGTCGATGATGCGGTGTCCACTTTCAAGTCTGTGACCATCGAT CACGAGGGTGCACATTTGGATGATGAGGGCTTGGCGCGTCCATCGGCAACGTGGACCTACATGGTCTCTGACAACCCACT CGCGGGTAGTGGCAACTCAGTGATCAGTGGCATAGGAAATATCTTTAGATAA
Upstream 100 bases:
>100_bases TCTTACCCACCAGTGCAATGTAGGTCACGTCGTATCACGTCTGAGGGTGATTGAGTAGGGTTAAACAGATGAATTCATTT AGCTCACCGGAGGTATAACC
Downstream 100 bases:
>100_bases CCTGAGAACTATGAAATTCCAGCTCACGGCGTTTTTTCAGGAAATTCTAGGATCTTACGGAGGGTAACTCCGCACTCAAC ATCTAGACAAAGGCTATGAT
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 763; Mature: 762
Protein sequence:
>763_residues MAGFDWFWKALGGKSGRNQKRSVAIVNQAENHVAELDALDDVALAQRAKDLASGGRIDNHAEFLAILGVASQRTLGLKPY PAQSQAVLRLIEGDVVHMATGEGKTLVGAMAATGLGLMGKRVHSITVNDYLAVRDAEWMRPLVEFFGLSVASISEKMDAG ERRQAYKAAIVYGPVNEIGFDVLRDQLITRREDAVQHGADVAIIDEADSVLVDEALVPLVLAGNQPGHAPRGKITDVVRS LKENDDYTIDDDRRNVFLTDKGAAKLEQQLGISSLYDDEHVGSTLVQVNLALHAQALLIRDIHYIVRDSKVLLIDASRGR VADLQRWPDGLQAAVEAKEGLAVSEGGKILDTITLQALIGRYPMACGMTGTAVEATNQLRTFYDLHVSVIERNHPLKRFD EADRIYATMAEKNRAIIDEIALLHSTGQPVLVGTHDVAESEELATALRELNIEVSVLNAKNDAEEAQIIAEAGDIGRVTV STQMAGRGTDIRLGGADEADYDEVVKLGGLAVIGTARHRSQRLDNQLRGRAGRQGDPGLSLFFVSLDDDVVVSGGSGESV SAQPDATGLIDSDRIRDWVGHCQRVTEGQLLEIHSQSWNYNKLLADQRVIIDERRERLLDTALAWEELAQHAPARAAELE DLDQSVREQAGRDIMLYHLDYNWSEHLALMDDVRESIHLRAIARETPLDEYHRIAVREFKDLAQRAVDDAVSTFKSVTID HEGAHLDDEGLARPSATWTYMVSDNPLAGSGNSVISGIGNIFR
Sequences:
>Translated_763_residues MAGFDWFWKALGGKSGRNQKRSVAIVNQAENHVAELDALDDVALAQRAKDLASGGRIDNHAEFLAILGVASQRTLGLKPY PAQSQAVLRLIEGDVVHMATGEGKTLVGAMAATGLGLMGKRVHSITVNDYLAVRDAEWMRPLVEFFGLSVASISEKMDAG ERRQAYKAAIVYGPVNEIGFDVLRDQLITRREDAVQHGADVAIIDEADSVLVDEALVPLVLAGNQPGHAPRGKITDVVRS LKENDDYTIDDDRRNVFLTDKGAAKLEQQLGISSLYDDEHVGSTLVQVNLALHAQALLIRDIHYIVRDSKVLLIDASRGR VADLQRWPDGLQAAVEAKEGLAVSEGGKILDTITLQALIGRYPMACGMTGTAVEATNQLRTFYDLHVSVIERNHPLKRFD EADRIYATMAEKNRAIIDEIALLHSTGQPVLVGTHDVAESEELATALRELNIEVSVLNAKNDAEEAQIIAEAGDIGRVTV STQMAGRGTDIRLGGADEADYDEVVKLGGLAVIGTARHRSQRLDNQLRGRAGRQGDPGLSLFFVSLDDDVVVSGGSGESV SAQPDATGLIDSDRIRDWVGHCQRVTEGQLLEIHSQSWNYNKLLADQRVIIDERRERLLDTALAWEELAQHAPARAAELE DLDQSVREQAGRDIMLYHLDYNWSEHLALMDDVRESIHLRAIARETPLDEYHRIAVREFKDLAQRAVDDAVSTFKSVTID HEGAHLDDEGLARPSATWTYMVSDNPLAGSGNSVISGIGNIFR >Mature_762_residues AGFDWFWKALGGKSGRNQKRSVAIVNQAENHVAELDALDDVALAQRAKDLASGGRIDNHAEFLAILGVASQRTLGLKPYP AQSQAVLRLIEGDVVHMATGEGKTLVGAMAATGLGLMGKRVHSITVNDYLAVRDAEWMRPLVEFFGLSVASISEKMDAGE RRQAYKAAIVYGPVNEIGFDVLRDQLITRREDAVQHGADVAIIDEADSVLVDEALVPLVLAGNQPGHAPRGKITDVVRSL KENDDYTIDDDRRNVFLTDKGAAKLEQQLGISSLYDDEHVGSTLVQVNLALHAQALLIRDIHYIVRDSKVLLIDASRGRV ADLQRWPDGLQAAVEAKEGLAVSEGGKILDTITLQALIGRYPMACGMTGTAVEATNQLRTFYDLHVSVIERNHPLKRFDE ADRIYATMAEKNRAIIDEIALLHSTGQPVLVGTHDVAESEELATALRELNIEVSVLNAKNDAEEAQIIAEAGDIGRVTVS TQMAGRGTDIRLGGADEADYDEVVKLGGLAVIGTARHRSQRLDNQLRGRAGRQGDPGLSLFFVSLDDDVVVSGGSGESVS AQPDATGLIDSDRIRDWVGHCQRVTEGQLLEIHSQSWNYNKLLADQRVIIDERRERLLDTALAWEELAQHAPARAAELED LDQSVREQAGRDIMLYHLDYNWSEHLALMDDVRESIHLRAIARETPLDEYHRIAVREFKDLAQRAVDDAVSTFKSVTIDH EGAHLDDEGLARPSATWTYMVSDNPLAGSGNSVISGIGNIFR
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular mo
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family
Homologues:
Organism=Escherichia coli, GI1786287, Length=665, Percent_Identity=37.593984962406, Blast_Score=377, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SECA2_CORGB (A4QIG3)
Other databases:
- EMBL: AP009044 - RefSeq: YP_001138394.1 - ProteinModelPortal: A4QIG3 - SMR: A4QIG3 - STRING: A4QIG3 - GeneID: 4993020 - GenomeReviews: AP009044_GR - KEGG: cgt:cgR_1500 - eggNOG: COG0653 - HOGENOM: HBG284200 - OMA: QRVTEGQ - ProtClustDB: PRK12326 - GO: GO:0005737 - HAMAP: MF_01382 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 - Gene3D: G3DSA:1.10.3060.10 - PRINTS: PR00906 - SMART: SM00957 - SMART: SM00958
Pfam domain/function: PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW; SSF81767 SecA_PP_bd; SSF81886 SecA_SW
EC number: NA
Molecular weight: Translated: 83459; Mature: 83328
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS01312 SECA; PS51196 SECA_MOTOR_DEAD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGFDWFWKALGGKSGRNQKRSVAIVNQAENHVAELDALDDVALAQRAKDLASGGRIDNH CCCHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH AEFLAILGVASQRTLGLKPYPAQSQAVLRLIEGDVVHMATGEGKTLVGAMAATGLGLMGK HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHCCHHHCC RVHSITVNDYLAVRDAEWMRPLVEFFGLSVASISEKMDAGERRQAYKAAIVYGPVNEIGF CEEEEEECCEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHEEEEEECCHHHHHH DVLRDQLITRREDAVQHGADVAIIDEADSVLVDEALVPLVLAGNQPGHAPRGKITDVVRS HHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHH LKENDDYTIDDDRRNVFLTDKGAAKLEQQLGISSLYDDEHVGSTLVQVNLALHAQALLIR HHCCCCEEECCCCCEEEEECCCHHHHHHHCCCHHHCCCHHHCCEEEEEEHHHHHHHHHHH DIHYIVRDSKVLLIDASRGRVADLQRWPDGLQAAVEAKEGLAVSEGGKILDTITLQALIG HHHHHHCCCEEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHC RYPMACGMTGTAVEATNQLRTFYDLHVSVIERNHPLKRFDEADRIYATMAEKNRAIIDEI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCHHHHHHH ALLHSTGQPVLVGTHDVAESEELATALRELNIEVSVLNAKNDAEEAQIIAEAGDIGRVTV HHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCEEEE STQMAGRGTDIRLGGADEADYDEVVKLGGLAVIGTARHRSQRLDNQLRGRAGRQGDPGLS EEEECCCCCEEEECCCCCCCHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCE LFFVSLDDDVVVSGGSGESVSAQPDATGLIDSDRIRDWVGHCQRVTEGQLLEIHSQSWNY EEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC NKLLADQRVIIDERRERLLDTALAWEELAQHAPARAAELEDLDQSVREQAGRDIMLYHLD HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEC YNWSEHLALMDDVRESIHLRAIARETPLDEYHRIAVREFKDLAQRAVDDAVSTFKSVTID CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC HEGAHLDDEGLARPSATWTYMVSDNPLAGSGNSVISGIGNIFR CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure AGFDWFWKALGGKSGRNQKRSVAIVNQAENHVAELDALDDVALAQRAKDLASGGRIDNH CCHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH AEFLAILGVASQRTLGLKPYPAQSQAVLRLIEGDVVHMATGEGKTLVGAMAATGLGLMGK HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHCCHHHCC RVHSITVNDYLAVRDAEWMRPLVEFFGLSVASISEKMDAGERRQAYKAAIVYGPVNEIGF CEEEEEECCEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHEEEEEECCHHHHHH DVLRDQLITRREDAVQHGADVAIIDEADSVLVDEALVPLVLAGNQPGHAPRGKITDVVRS HHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHH LKENDDYTIDDDRRNVFLTDKGAAKLEQQLGISSLYDDEHVGSTLVQVNLALHAQALLIR HHCCCCEEECCCCCEEEEECCCHHHHHHHCCCHHHCCCHHHCCEEEEEEHHHHHHHHHHH DIHYIVRDSKVLLIDASRGRVADLQRWPDGLQAAVEAKEGLAVSEGGKILDTITLQALIG HHHHHHCCCEEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHC RYPMACGMTGTAVEATNQLRTFYDLHVSVIERNHPLKRFDEADRIYATMAEKNRAIIDEI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCHHHHHHH ALLHSTGQPVLVGTHDVAESEELATALRELNIEVSVLNAKNDAEEAQIIAEAGDIGRVTV HHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCEEEE STQMAGRGTDIRLGGADEADYDEVVKLGGLAVIGTARHRSQRLDNQLRGRAGRQGDPGLS EEEECCCCCEEEECCCCCCCHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCE LFFVSLDDDVVVSGGSGESVSAQPDATGLIDSDRIRDWVGHCQRVTEGQLLEIHSQSWNY EEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC NKLLADQRVIIDERRERLLDTALAWEELAQHAPARAAELEDLDQSVREQAGRDIMLYHLD HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEC YNWSEHLALMDDVRESIHLRAIARETPLDEYHRIAVREFKDLAQRAVDDAVSTFKSVTID CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC HEGAHLDDEGLARPSATWTYMVSDNPLAGSGNSVISGIGNIFR CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA