| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is zupT [H]
Identifier: 145295568
GI number: 145295568
Start: 1656554
End: 1657360
Strand: Direct
Name: zupT [H]
Synonym: cgR_1495
Alternate gene names: 145295568
Gene position: 1656554-1657360 (Clockwise)
Preceding gene: 145295567
Following gene: 145295573
Centisome position: 49.98
GC content: 58.74
Gene sequence:
>807_bases ATGGATACCTCGACTGTGTTGTTCGCATTTGGACTCACCCTATTTGCCGGTCTTGCCACCGGCATCGGCGGTCTCATCGC CGTATCGCGCAAAACCGTCACCGAAGGATTCCTCGCAGGATCACTCGGCTTCTCTGTCGGCGTGATGCTGTACGTATCCT TTGTGGAAATTCTACCCGGCGCCTTTGATGAATTAACCAGTGTTTGGGGAGAAAAAGGCGGAAGTTGGGCCGCTGTTATC GGCTTCTTCGGTGGCATCGCGCTGATCGCCATCATCGACCGCTTAGTCCCCACGGCGATTAACCCCCACGAGCCCTCCAC CGTGGGAGGCGCCGTTGAAGGATTCGAGCGCCGCAACCGCATGATGAAAATGGGCGTGCTCACTGCGCTGGCCATCGCGA TCCACAACTTTCCCGAAGGTTTCGCTACATTCTTGGCCGGATTGTCCGATCCAACGATCGCGATCCCTGTGGCCGTGGCA ATTGCCATTCACAATATTCCAGAGGGCATTGCGGTGGCAGTGCCACTGAGGGAAGCTACAGGGTCACGTCGAAAAGCATT AGGCTGGGCGACCCTCTCCGGTCTTGCTGAGCCCGCCGGCGCCCTCATCGGATTCCTGCTGCTCATGCCCTTTATCGGGC CAGAAGCACTCGGCCTGTGCTTCGCCGCAGTCGCCGGCGTGATGGTGTTCATTAGCGTCGACGAACTGCTGCCCACCGCC ATCTCCAGCGGCAAACACCACACCGCCATCTACGGCCTCATCGCCGGCATGGCAGTCATGGCGATCAGCCTGCTGCTGTT TATCTAG
Upstream 100 bases:
>100_bases AGTTATTGGATAACGGGGGTATTTATCAGCGTCTGTGGACTGCGTGGAGTGTCGGAAGATAGTTGACTGTTCAATCCGTT GAACATTAGTATTCAGCCCT
Downstream 100 bases:
>100_bases CGTTCAGCCGCAACAAGCATCCGGTCAATGTTGGTCAACACCTCATCAACGTAAGCCGGATTAACGCCGCGCTCCCGACG CGCCTTCAACAGCTCCTCCT
Product: zinc transporter ZupT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MDTSTVLFAFGLTLFAGLATGIGGLIAVSRKTVTEGFLAGSLGFSVGVMLYVSFVEILPGAFDELTSVWGEKGGSWAAVI GFFGGIALIAIIDRLVPTAINPHEPSTVGGAVEGFERRNRMMKMGVLTALAIAIHNFPEGFATFLAGLSDPTIAIPVAVA IAIHNIPEGIAVAVPLREATGSRRKALGWATLSGLAEPAGALIGFLLLMPFIGPEALGLCFAAVAGVMVFISVDELLPTA ISSGKHHTAIYGLIAGMAVMAISLLLFI
Sequences:
>Translated_268_residues MDTSTVLFAFGLTLFAGLATGIGGLIAVSRKTVTEGFLAGSLGFSVGVMLYVSFVEILPGAFDELTSVWGEKGGSWAAVI GFFGGIALIAIIDRLVPTAINPHEPSTVGGAVEGFERRNRMMKMGVLTALAIAIHNFPEGFATFLAGLSDPTIAIPVAVA IAIHNIPEGIAVAVPLREATGSRRKALGWATLSGLAEPAGALIGFLLLMPFIGPEALGLCFAAVAGVMVFISVDELLPTA ISSGKHHTAIYGLIAGMAVMAISLLLFI >Mature_268_residues MDTSTVLFAFGLTLFAGLATGIGGLIAVSRKTVTEGFLAGSLGFSVGVMLYVSFVEILPGAFDELTSVWGEKGGSWAAVI GFFGGIALIAIIDRLVPTAINPHEPSTVGGAVEGFERRNRMMKMGVLTALAIAIHNFPEGFATFLAGLSDPTIAIPVAVA IAIHNIPEGIAVAVPLREATGSRRKALGWATLSGLAEPAGALIGFLLLMPFIGPEALGLCFAAVAGVMVFISVDELLPTA ISSGKHHTAIYGLIAGMAVMAISLLLFI
Specific function: Mediates zinc uptake. May also transport other divalent cations [H]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily [H]
Homologues:
Organism=Homo sapiens, GI229577418, Length=138, Percent_Identity=36.231884057971, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI229577422, Length=138, Percent_Identity=36.231884057971, Blast_Score=68, Evalue=9e-12, Organism=Escherichia coli, GI1789419, Length=258, Percent_Identity=39.5348837209302, Blast_Score=153, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17507805, Length=295, Percent_Identity=27.7966101694915, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24652846, Length=176, Percent_Identity=31.8181818181818, Blast_Score=74, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 27581; Mature: 27581
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTSTVLFAFGLTLFAGLATGIGGLIAVSRKTVTEGFLAGSLGFSVGVMLYVSFVEILPG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AFDELTSVWGEKGGSWAAVIGFFGGIALIAIIDRLVPTAINPHEPSTVGGAVEGFERRNR CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH MMKMGVLTALAIAIHNFPEGFATFLAGLSDPTIAIPVAVAIAIHNIPEGIAVAVPLREAT HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHC GSRRKALGWATLSGLAEPAGALIGFLLLMPFIGPEALGLCFAAVAGVMVFISVDELLPTA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSGKHHTAIYGLIAGMAVMAISLLLFI HCCCCCHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDTSTVLFAFGLTLFAGLATGIGGLIAVSRKTVTEGFLAGSLGFSVGVMLYVSFVEILPG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AFDELTSVWGEKGGSWAAVIGFFGGIALIAIIDRLVPTAINPHEPSTVGGAVEGFERRNR CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH MMKMGVLTALAIAIHNFPEGFATFLAGLSDPTIAIPVAVAIAIHNIPEGIAVAVPLREAT HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHC GSRRKALGWATLSGLAEPAGALIGFLLLMPFIGPEALGLCFAAVAGVMVFISVDELLPTA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSGKHHTAIYGLIAGMAVMAISLLLFI HCCCCCHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]