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The map label for this gene is yqxC [H]

Identifier: 145295546

GI number: 145295546

Start: 1631617

End: 1632438

Strand: Direct

Name: yqxC [H]

Synonym: cgR_1473

Alternate gene names: 145295546

Gene position: 1631617-1632438 (Clockwise)

Preceding gene: 145295545

Following gene: 145295547

Centisome position: 49.23

GC content: 55.84

Gene sequence:

>822_bases
ATGGTTGCACGCAGAAGACTGGACGCAGAACTTGTTCGTCGAAAGATCGCACGATCAAGGGAACACGCGGTTGAAATGAT
CCGCGGTCGACGCGTCTTTGTTGCAGGAATGCTTGCCTTAAAGCCCGCAACAGTCGTGGAACCAGAGGTGTCTATTCGTG
TGGAAGAAGATGCTAGTGAAGATTGGGCATCCCGCGGTGCGCACAAGCTTCTTGGTGCGCTGGAATCTTTTGAGCCCTTG
GGGCTCAAGGTCAAGGGCCGTCGCGTGCTAGATGCCGGCGCTTCGACAGGCGGATTTACGGACGTGTTGCTACGTCGAGA
AGCGTCTGAAGTAGTGGCAGTAGACGTGGGCTACGGACAGCTTATTTGGCGCCTGCAAAACGACGACCGCGTGCGCGTGG
TGGACCGCACCAACATCAGATACATGACGCTGGAAGACACCGGCGGAGAATGCGACATGATGGTGGGCGATCTCTCATTT
ATCTCGCTCAAACTCACGTTGCCGGCGATCGCCAAGGTCCTAAGCGACGGCGCTGATCTATTACCCATGGTCAAGCCACA
ATTTGAAGTCGGAAAAGACCGATTGGGCAGTGGCGGCGTGGTGCGCTCACCAGAGTTGCGCGCAGAAGTTACCGCGGATG
TCGCGAAATTTGCGGCCACTTTGGGCCTGAGCTTGAAGCATGTTGTTGCATCCCCGCTGCCCGGCCCGTCAGGCAACGTA
GAATACTTCCTGTGGCTGGTTAAAGATGGTGGCGCTTCAATGCCGGATGACCAGCAATTGTCGGCAATGATTGACACGGC
TGTAAAGGAAGGTCCGCAATAA

Upstream 100 bases:

>100_bases
GAGATGAAGCCCTCAACCTTGAGGAAGCCCACCGCATCCTCAACGACGCATTGTCTTAAACACTATTTTTTAACCACTCA
CGAAAGAAGAACACCTCCAG

Downstream 100 bases:

>100_bases
TGACTGCACCCACGAACGCTGGGGAACTCAGGCGAGTTTTGCTGGTTCCACACACCGGGCGTTCTTCCAATATTGAATCC
GCCATCTTGGCAGCCAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MVARRRLDAELVRRKIARSREHAVEMIRGRRVFVAGMLALKPATVVEPEVSIRVEEDASEDWASRGAHKLLGALESFEPL
GLKVKGRRVLDAGASTGGFTDVLLRREASEVVAVDVGYGQLIWRLQNDDRVRVVDRTNIRYMTLEDTGGECDMMVGDLSF
ISLKLTLPAIAKVLSDGADLLPMVKPQFEVGKDRLGSGGVVRSPELRAEVTADVAKFAATLGLSLKHVVASPLPGPSGNV
EYFLWLVKDGGASMPDDQQLSAMIDTAVKEGPQ

Sequences:

>Translated_273_residues
MVARRRLDAELVRRKIARSREHAVEMIRGRRVFVAGMLALKPATVVEPEVSIRVEEDASEDWASRGAHKLLGALESFEPL
GLKVKGRRVLDAGASTGGFTDVLLRREASEVVAVDVGYGQLIWRLQNDDRVRVVDRTNIRYMTLEDTGGECDMMVGDLSF
ISLKLTLPAIAKVLSDGADLLPMVKPQFEVGKDRLGSGGVVRSPELRAEVTADVAKFAATLGLSLKHVVASPLPGPSGNV
EYFLWLVKDGGASMPDDQQLSAMIDTAVKEGPQ
>Mature_273_residues
MVARRRLDAELVRRKIARSREHAVEMIRGRRVFVAGMLALKPATVVEPEVSIRVEEDASEDWASRGAHKLLGALESFEPL
GLKVKGRRVLDAGASTGGFTDVLLRREASEVVAVDVGYGQLIWRLQNDDRVRVVDRTNIRYMTLEDTGGECDMMVGDLSF
ISLKLTLPAIAKVLSDGADLLPMVKPQFEVGKDRLGSGGVVRSPELRAEVTADVAKFAATLGLSLKHVVASPLPGPSGNV
EYFLWLVKDGGASMPDDQQLSAMIDTAVKEGPQ

Specific function: Unknown

COG id: COG1189

COG function: function code J; Predicted rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004538
- InterPro:   IPR002877
- InterPro:   IPR002942 [H]

Pfam domain/function: PF01728 FtsJ; PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 29661; Mature: 29661

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVARRRLDAELVRRKIARSREHAVEMIRGRRVFVAGMLALKPATVVEPEVSIRVEEDASE
CCCHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHCCCCEEECCCEEEEECCCCCH
DWASRGAHKLLGALESFEPLGLKVKGRRVLDAGASTGGFTDVLLRREASEVVAVDVGYGQ
HHHHCCHHHHHHHHHCCCCCCEEEECCEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCE
LIWRLQNDDRVRVVDRTNIRYMTLEDTGGECDMMVGDLSFISLKLTLPAIAKVLSDGADL
EEEEECCCCEEEEEECCCEEEEEEECCCCCEEEEEECEEEEEEEEEHHHHHHHHCCCCCC
LPMVKPQFEVGKDRLGSGGVVRSPELRAEVTADVAKFAATLGLSLKHVVASPLPGPSGNV
CCCCCCCHHCCCHHCCCCCCEECCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCE
EYFLWLVKDGGASMPDDQQLSAMIDTAVKEGPQ
EEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVARRRLDAELVRRKIARSREHAVEMIRGRRVFVAGMLALKPATVVEPEVSIRVEEDASE
CCCHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHCCCCEEECCCEEEEECCCCCH
DWASRGAHKLLGALESFEPLGLKVKGRRVLDAGASTGGFTDVLLRREASEVVAVDVGYGQ
HHHHCCHHHHHHHHHCCCCCCEEEECCEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCE
LIWRLQNDDRVRVVDRTNIRYMTLEDTGGECDMMVGDLSFISLKLTLPAIAKVLSDGADL
EEEEECCCCEEEEEECCCEEEEEEECCCCCEEEEEECEEEEEEEEEHHHHHHHHCCCCCC
LPMVKPQFEVGKDRLGSGGVVRSPELRAEVTADVAKFAATLGLSLKHVVASPLPGPSGNV
CCCCCCCHHCCCHHCCCCCCEECCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCE
EYFLWLVKDGGASMPDDQQLSAMIDTAVKEGPQ
EEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 2507400 [H]