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The map label for this gene is nisX1 [H]

Identifier: 145295477

GI number: 145295477

Start: 1547074

End: 1547970

Strand: Reverse

Name: nisX1 [H]

Synonym: cgR_1410

Alternate gene names: 145295477

Gene position: 1547970-1547074 (Counterclockwise)

Preceding gene: 145295478

Following gene: 145295476

Centisome position: 46.71

GC content: 57.19

Gene sequence:

>897_bases
GTGAGCCGCTTCCGGTTCGTTGACGACACCCGACACGACCACTCGGTTAAGCGGTTATGTGAGGTCCTGAAACTGAATCG
GTCCTCGTATTACAAATGGAAAAGCACTGCCCACATCAGGAAGAAACGCCTGCTCAGTGATGCTATCCTCGGGGCTCGGA
TCAAGACCGTGTTCACCAAGGAACGCGGATGTTATGGTGCCAAACGCATTACCGCTGAACTCAACAACGACTCGGCCGGC
ATCCCGGTCAATCACAAGCGGGTCGCCCGGATCATGCGTTCGCTGAAGCTATGCGGCTACACCAGGAAACGCAAGGTCAC
CACCACAGTGTCTGAACAGAAGAAACCGGTGTTCCCGGATCTGGTGGGCCGGAAATTCACCGCTGAAAAGCCGAATCAGG
TGTACGTCGGGGACATTACGTATCTGCCGATTGCTGATGGGTCGAATATGTACCTGGCCACGGTCATCGACTGTTTCTCC
CGCCGGCTGGTTGGCTTCGCGATCGCGGACCACATGCGCACGGGTCTGGTCCAGGATGCCCTGCTCATGGCGAAAGGCCA
GCGCGGCAGCCTGGAGGTAGCCGTTTTCCACTCCGACCACGGCAGTGTTTACACTTCGCATACATTTCAGGGCGCCTGCA
AAAACCTTGGGATCAGGCAGTCGATGGGAGGAATTGGTACCAGCGCGGATAATGCGCTGGCGGAGTCCTTCAACGCCGCC
CTAAAGCGGGAAGTCCTCCAGGACGCCAAGACGTTTGCCAATCAGCTCCAGTGTCGGCGGGATGTCTTCCGCTGGTGCAC
CCGCTACAACACGGTTCGTCGGCATTCCTGGTGTAAATATCTCGCGCCAGCGGTGTTTGAGGAGCGGTGTCCTGTTATCC
TGAAATCTGCTTCCTGA

Upstream 100 bases:

>100_bases
CCGAGCGGATCCGCCAGCTGGAACGGGAAGTCAGCCGGCTGCGGGAAGAACGCGATATCCTGCGCAAGGCCGCTAAATAT
TTTGCGGAAGAGACGAACTG

Downstream 100 bases:

>100_bases
TCAAATCCCCCGTGTCCACTTTCCGGGGGTCGGGCCCGAGAATCTGATTCGACATACATATGCGTAACAACAATGTCACA
CAGTGACTGAACGATACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSRFRFVDDTRHDHSVKRLCEVLKLNRSSYYKWKSTAHIRKKRLLSDAILGARIKTVFTKERGCYGAKRITAELNNDSAG
IPVNHKRVARIMRSLKLCGYTRKRKVTTTVSEQKKPVFPDLVGRKFTAEKPNQVYVGDITYLPIADGSNMYLATVIDCFS
RRLVGFAIADHMRTGLVQDALLMAKGQRGSLEVAVFHSDHGSVYTSHTFQGACKNLGIRQSMGGIGTSADNALAESFNAA
LKREVLQDAKTFANQLQCRRDVFRWCTRYNTVRRHSWCKYLAPAVFEERCPVILKSAS

Sequences:

>Translated_298_residues
MSRFRFVDDTRHDHSVKRLCEVLKLNRSSYYKWKSTAHIRKKRLLSDAILGARIKTVFTKERGCYGAKRITAELNNDSAG
IPVNHKRVARIMRSLKLCGYTRKRKVTTTVSEQKKPVFPDLVGRKFTAEKPNQVYVGDITYLPIADGSNMYLATVIDCFS
RRLVGFAIADHMRTGLVQDALLMAKGQRGSLEVAVFHSDHGSVYTSHTFQGACKNLGIRQSMGGIGTSADNALAESFNAA
LKREVLQDAKTFANQLQCRRDVFRWCTRYNTVRRHSWCKYLAPAVFEERCPVILKSAS
>Mature_297_residues
SRFRFVDDTRHDHSVKRLCEVLKLNRSSYYKWKSTAHIRKKRLLSDAILGARIKTVFTKERGCYGAKRITAELNNDSAGI
PVNHKRVARIMRSLKLCGYTRKRKVTTTVSEQKKPVFPDLVGRKFTAEKPNQVYVGDITYLPIADGSNMYLATVIDCFSR
RLVGFAIADHMRTGLVQDALLMAKGQRGSLEVAVFHSDHGSVYTSHTFQGACKNLGIRQSMGGIGTSADNALAESFNAAL
KREVLQDAKTFANQLQCRRDVFRWCTRYNTVRRHSWCKYLAPAVFEERCPVILKSAS

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=245, Percent_Identity=33.8775510204082, Blast_Score=136, Evalue=2e-32,
Organism=Escherichia coli, GI1788405, Length=292, Percent_Identity=33.5616438356164, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1787263, Length=292, Percent_Identity=33.5616438356164, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1786753, Length=292, Percent_Identity=33.5616438356164, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1786570, Length=292, Percent_Identity=33.5616438356164, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1786490, Length=292, Percent_Identity=33.5616438356164, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1789981, Length=284, Percent_Identity=27.8169014084507, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 33746; Mature: 33615

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFRFVDDTRHDHSVKRLCEVLKLNRSSYYKWKSTAHIRKKRLLSDAILGARIKTVFTK
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERGCYGAKRITAELNNDSAGIPVNHKRVARIMRSLKLCGYTRKRKVTTTVSEQKKPVFPD
CCCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHCCCCCCHH
LVGRKFTAEKPNQVYVGDITYLPIADGSNMYLATVIDCFSRRLVGFAIADHMRTGLVQDA
HHCCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMAKGQRGSLEVAVFHSDHGSVYTSHTFQGACKNLGIRQSMGGIGTSADNALAESFNAA
HHHHCCCCCCEEEEEEECCCCCEEECCHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHH
LKREVLQDAKTFANQLQCRRDVFRWCTRYNTVRRHSWCKYLAPAVFEERCPVILKSAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
>Mature Secondary Structure 
SRFRFVDDTRHDHSVKRLCEVLKLNRSSYYKWKSTAHIRKKRLLSDAILGARIKTVFTK
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERGCYGAKRITAELNNDSAGIPVNHKRVARIMRSLKLCGYTRKRKVTTTVSEQKKPVFPD
CCCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHCCCCCCHH
LVGRKFTAEKPNQVYVGDITYLPIADGSNMYLATVIDCFSRRLVGFAIADHMRTGLVQDA
HHCCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMAKGQRGSLEVAVFHSDHGSVYTSHTFQGACKNLGIRQSMGGIGTSADNALAESFNAA
HHHHCCCCCCEEEEEEECCCCCEEECCHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHH
LKREVLQDAKTFANQLQCRRDVFRWCTRYNTVRRHSWCKYLAPAVFEERCPVILKSAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]