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The map label for this gene is 145295476

Identifier: 145295476

GI number: 145295476

Start: 1543871

End: 1544629

Strand: Reverse

Name: 145295476

Synonym: cgR_1409

Alternate gene names: NA

Gene position: 1544629-1543871 (Counterclockwise)

Preceding gene: 145295477

Following gene: 145295475

Centisome position: 46.61

GC content: 47.56

Gene sequence:

>759_bases
ATGCCCTTTTCTCACGACAAATCTGAACTCGGTGGGGAAACCCCCTACGGGCTTGTACATGTTAACCCTATGGCTGAAGT
GCGACCTGTAAAAGCACAAACCAACGAGCCCCAAGCACTGCAGGTTGCTGACATTCAACCCTTTCACGCTGTTATTGCGG
CCTCAAAACAATTGACTCTCATCGACGTTGTCGATGTCTGCCTTGGAACAGTGTTGCGAGCATGGGAAGCACTGAGCCTG
CGATGGGTAGACGTGGTGCTTGACGAGGAGCATCCAAGAATCTTTATCCGAGGCACCATTGTCTACAACAAAGAAAAAGG
TAACCACAGACAAGATAAAACAAAAACGACCAGCAGTAGGCGTGTCATTCAGTTGCCAGAAATTGCCTCAGACGTCTTAC
GCAAAAGACATGCACTCTACGCCGAACATCTCGAAATGGTGTTCCCTTCCGCTAGAGGCACATATATTTATGAGTCCAAT
TTCAACAAATTGTTGCGAAAACACCGAAAGGGTACTGCATATGATTGGGTGACCGTGCACAGCATCAGGAAAACCCTTGC
ATCAATTGTCTCTGAGAACCTTGATTCCAAGGCCGCATCAGACGTACTCGGCCATGCTGACTCACGACTCACAGAACGGG
TCTACATCGCTAAAACTGACAAAGACGTTCCGATTGGTGATGTCGTCAACCAAGCGCTCAAAGAGGCACGAAAAGTCTCC
AAAAAGTCTCCAAATAGAGAAGCTAAAGAAGAAGAATAG

Upstream 100 bases:

>100_bases
CCGCTTTATCTACTACGGCCTCAGCCATAGCGTGGTTGGCGAAGTTGTGTTTGCAATAGTTTTTTAAATATCCCCAGCCT
TCATTCCTGTAACGGTCATA

Downstream 100 bases:

>100_bases
ACGCAATAGTTGCATTTTTAGTTAACATCGAGCTGCAACAACAGCAATAAACACTCAATTACATGACAGAAATGATCTGG
TCTCACTCCCGTCCAGTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Site-Specific Recombinase XerD; Phage-Related Integrase

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPFSHDKSELGGETPYGLVHVNPMAEVRPVKAQTNEPQALQVADIQPFHAVIAASKQLTLIDVVDVCLGTVLRAWEALSL
RWVDVVLDEEHPRIFIRGTIVYNKEKGNHRQDKTKTTSSRRVIQLPEIASDVLRKRHALYAEHLEMVFPSARGTYIYESN
FNKLLRKHRKGTAYDWVTVHSIRKTLASIVSENLDSKAASDVLGHADSRLTERVYIAKTDKDVPIGDVVNQALKEARKVS
KKSPNREAKEEE

Sequences:

>Translated_252_residues
MPFSHDKSELGGETPYGLVHVNPMAEVRPVKAQTNEPQALQVADIQPFHAVIAASKQLTLIDVVDVCLGTVLRAWEALSL
RWVDVVLDEEHPRIFIRGTIVYNKEKGNHRQDKTKTTSSRRVIQLPEIASDVLRKRHALYAEHLEMVFPSARGTYIYESN
FNKLLRKHRKGTAYDWVTVHSIRKTLASIVSENLDSKAASDVLGHADSRLTERVYIAKTDKDVPIGDVVNQALKEARKVS
KKSPNREAKEEE
>Mature_251_residues
PFSHDKSELGGETPYGLVHVNPMAEVRPVKAQTNEPQALQVADIQPFHAVIAASKQLTLIDVVDVCLGTVLRAWEALSLR
WVDVVLDEEHPRIFIRGTIVYNKEKGNHRQDKTKTTSSRRVIQLPEIASDVLRKRHALYAEHLEMVFPSARGTYIYESNF
NKLLRKHRKGTAYDWVTVHSIRKTLASIVSENLDSKAASDVLGHADSRLTERVYIAKTDKDVPIGDVVNQALKEARKVSK
KSPNREAKEEE

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28453; Mature: 28322

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFSHDKSELGGETPYGLVHVNPMAEVRPVKAQTNEPQALQVADIQPFHAVIAASKQLTL
CCCCCCHHHCCCCCCCEEEEECCHHHCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCHH
IDVVDVCLGTVLRAWEALSLRWVDVVLDEEHPRIFIRGTIVYNKEKGNHRQDKTKTTSSR
HHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCHHHHCCCCC
RVIQLPEIASDVLRKRHALYAEHLEMVFPSARGTYIYESNFNKLLRKHRKGTAYDWVTVH
EEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCCHHHHHH
SIRKTLASIVSENLDSKAASDVLGHADSRLTERVYIAKTDKDVPIGDVVNQALKEARKVS
HHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHH
KKSPNREAKEEE
HCCCCCCCCCCC
>Mature Secondary Structure 
PFSHDKSELGGETPYGLVHVNPMAEVRPVKAQTNEPQALQVADIQPFHAVIAASKQLTL
CCCCCHHHCCCCCCCEEEEECCHHHCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCHH
IDVVDVCLGTVLRAWEALSLRWVDVVLDEEHPRIFIRGTIVYNKEKGNHRQDKTKTTSSR
HHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEEEEEEEECCCCCCCCHHHHCCCCC
RVIQLPEIASDVLRKRHALYAEHLEMVFPSARGTYIYESNFNKLLRKHRKGTAYDWVTVH
EEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCCHHHHHH
SIRKTLASIVSENLDSKAASDVLGHADSRLTERVYIAKTDKDVPIGDVVNQALKEARKVS
HHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHH
KKSPNREAKEEE
HCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA