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The map label for this gene is atpH

Identifier: 145295348

GI number: 145295348

Start: 1416899

End: 1417714

Strand: Direct

Name: atpH

Synonym: cgR_1287

Alternate gene names: 145295348

Gene position: 1416899-1417714 (Clockwise)

Preceding gene: 145295347

Following gene: 145295349

Centisome position: 42.75

GC content: 57.35

Gene sequence:

>816_bases
ATGCACGCAGCAAGCCGCGAGGCACTGGCAAAGGTTTCGTCCGATCTGGACGCTGCTCTAGCAGCAGACAACACCATGGC
AGTTGCCGCCCAGGCTGGAACTGAGCTTTTCGACGTCGTCGACATTCTCGACGGCGACCGAGCTCTGCGTGTTGCTGTTG
CCGACTCTTCTAAGGACGCACACAGCCGAGTCGGCCTCATTGAGGCTGTCTTCGGTGGAAAAGTGAGCCCATCTGTTCTC
GAAGTCCTCAAGGACGCCGCAGAGCAGACCTGGTCCACTCCACGCGAGTTCCGCGCTGGACTAGTCCAACTTGGCCGTCG
CGCCCTTCTTCGCTCTGCGGAGAAACAGGGTCAGCTTGGTCAGGTGGAAGATGAACTGTTCCGACTCAGCCGAATCCTGG
ATCGCGAAAGCAAGCTGACTCAGCTTCTTTCAGATCGCACTCAGGAAATTGGCGGTCGACGTGACCTCCTGGCTAAGGTG
CTCTACGGCAAGGTAACTGCTGTTACCGAAGCCCTCGCACTGCAGGCTATTGGTCGCCCTGAGCACAACCCAATTGACGA
TATCGCAGCTTTGGCTGGCGCTGTAGCAGAGCTACAGGGTCGTTCCGTTGCACATGTCGTTACCGCAGTTGAACTCAACG
AGGGACAGCAACAAGCGCTAGCTGAAAAGCTGGGACGTATTTATGGTCGTGCGATGAGCATCCACTCCGAGGTTGATACC
AGCCTCCTCGGTGGAATGATCATCCGCGTCGGAGACGAAGTAATTGACGGCAGCACCTCGGGCAAACTCGAGCGTCTGCG
GGCAAGCTTCGCATAA

Upstream 100 bases:

>100_bases
TTCTTGGAGATCAGCTCTCCGATAACGTGAAGCGCTCTGGCACGATTGATCGCTTCCTCGCTGACCTCGATACCGTGGCA
CCGAACGGAAAGTAGGCGAC

Downstream 100 bases:

>100_bases
AGACACGACGAATTAGACAACATTAGTAATGCTGGAAGAAACAACCGAGAGCAGGAAGAACATGGCGGAGCTGACGATCT
CCTCCGATGAGATCCGTAGC

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MHAASREALAKVSSDLDAALAADNTMAVAAQAGTELFDVVDILDGDRALRVAVADSSKDAHSRVGLIEAVFGGKVSPSVL
EVLKDAAEQTWSTPREFRAGLVQLGRRALLRSAEKQGQLGQVEDELFRLSRILDRESKLTQLLSDRTQEIGGRRDLLAKV
LYGKVTAVTEALALQAIGRPEHNPIDDIAALAGAVAELQGRSVAHVVTAVELNEGQQQALAEKLGRIYGRAMSIHSEVDT
SLLGGMIIRVGDEVIDGSTSGKLERLRASFA

Sequences:

>Translated_271_residues
MHAASREALAKVSSDLDAALAADNTMAVAAQAGTELFDVVDILDGDRALRVAVADSSKDAHSRVGLIEAVFGGKVSPSVL
EVLKDAAEQTWSTPREFRAGLVQLGRRALLRSAEKQGQLGQVEDELFRLSRILDRESKLTQLLSDRTQEIGGRRDLLAKV
LYGKVTAVTEALALQAIGRPEHNPIDDIAALAGAVAELQGRSVAHVVTAVELNEGQQQALAEKLGRIYGRAMSIHSEVDT
SLLGGMIIRVGDEVIDGSTSGKLERLRASFA
>Mature_271_residues
MHAASREALAKVSSDLDAALAADNTMAVAAQAGTELFDVVDILDGDRALRVAVADSSKDAHSRVGLIEAVFGGKVSPSVL
EVLKDAAEQTWSTPREFRAGLVQLGRRALLRSAEKQGQLGQVEDELFRLSRILDRESKLTQLLSDRTQEIGGRRDLLAKV
LYGKVTAVTEALALQAIGRPEHNPIDDIAALAGAVAELQGRSVAHVVTAVELNEGQQQALAEKLGRIYGRAMSIHSEVDT
SLLGGMIIRVGDEVIDGSTSGKLERLRASFA

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_CORGB (A4QDH0)

Other databases:

- EMBL:   AP009044
- RefSeq:   YP_001138169.1
- STRING:   A4QDH0
- GeneID:   4993477
- GenomeReviews:   AP009044_GR
- KEGG:   cgt:cgR_1287
- eggNOG:   COG0712
- HOGENOM:   HBG566588
- OMA:   AVEDELF
- ProtClustDB:   PRK13430
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 28883; Mature: 28883

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAASREALAKVSSDLDAALAADNTMAVAAQAGTELFDVVDILDGDRALRVAVADSSKDA
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCCEEEEEEECCCCHH
HSRVGLIEAVFGGKVSPSVLEVLKDAAEQTWSTPREFRAGLVQLGRRALLRSAEKQGQLG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
QVEDELFRLSRILDRESKLTQLLSDRTQEIGGRRDLLAKVLYGKVTAVTEALALQAIGRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EHNPIDDIAALAGAVAELQGRSVAHVVTAVELNEGQQQALAEKLGRIYGRAMSIHSEVDT
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLLGGMIIRVGDEVIDGSTSGKLERLRASFA
HHHHHHHHHHCHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MHAASREALAKVSSDLDAALAADNTMAVAAQAGTELFDVVDILDGDRALRVAVADSSKDA
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCCEEEEEEECCCCHH
HSRVGLIEAVFGGKVSPSVLEVLKDAAEQTWSTPREFRAGLVQLGRRALLRSAEKQGQLG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
QVEDELFRLSRILDRESKLTQLLSDRTQEIGGRRDLLAKVLYGKVTAVTEALALQAIGRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EHNPIDDIAALAGAVAELQGRSVAHVVTAVELNEGQQQALAEKLGRIYGRAMSIHSEVDT
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLLGGMIIRVGDEVIDGSTSGKLERLRASFA
HHHHHHHHHHCHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA