| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145295194
Identifier: 145295194
GI number: 145295194
Start: 1244779
End: 1245534
Strand: Reverse
Name: 145295194
Synonym: cgR_1136
Alternate gene names: NA
Gene position: 1245534-1244779 (Counterclockwise)
Preceding gene: 145295196
Following gene: 145295190
Centisome position: 37.58
GC content: 50.66
Gene sequence:
>756_bases ATGAGTGAGACTGTTTTAGTCATAGGAGCAACAGGAAGCATAGGCCGACATGTTGTCTCGGAAGCACTTAACCAGGGATA CCTCGTTAAGGCATTTGTCCGCAGTGAGTCCCGTGCACGGGTGCTTCCAGCTGAGGCAGAGATTATCGTAGGAGATCTGC TTGATCCTTCCTCGATTGAGAAAGCTGTAAAAAGCGTTGAGGGAATCATTTTCACTCACGGCACTTCCACTCGTGAAAGC GATGTGCGGGATGTTGATTACACCGGCGTTGCCAACACGTTGAAGGCAGTCAAGGGAAAAGATGTAAAAATTGTGCTGAT GACCGCCGTTGGAACGACCCGTCCAGGCGTGGCTTATGCCGAGTGGAAGCGACATGGCGAGCAACTTGTTCGAGCTAGCA GCCATGATTACACGATTGTTCGCCCTGGTTGGTTTGACTACAACAATGATGACGAGCGTCAGATCGTCATGCTTCAAGGC GACACCAATCAGTCGGGCAGCCCAGCAGATGGTGTGATTGCGCGTGATCAAATCGCCCGAGTTTTGGTTAGTAGTTTGAA TGATGCAGAAGCTCGAAACAAAACCTTCGAGCTTTCTGCCACTCACGGTGTCGCCCAGGAAAGTCTCACTGCAACCTTTG CCACCCTACAGACTGATAACTCCGGGAAGATCGAAGGCATCTTGGATACCAATATCGTTCCGGTTGAGTCCTCTGCCACT CTATTTCAGGCCGATTTGGCCAGCATTTCTTCCTAG
Upstream 100 bases:
>100_bases TTGCTAGTACCAGGGTAAACAGCCACTCCCAGGGCAATTGAAACAAGGATTGAATGGATCACGGGAACACCCCCAAAACC AAAGAACCTAGGAGAACATC
Downstream 100 bases:
>100_bases AGCCTAGCCCTTCCGCTGGTGGTGGGCTGCAGCGCGCATCCTAGGTTGCTGGATAGGTGACTTGCCCATCGTCATTAATC ACTGGTTTCGCGCCCCACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NmrA Family Protein; NmrA-Like Family; Nucleoside-Diphosphate-Sugar Epimerase; NmrA-Like; NAD Dependent Epimerase/Dehydratase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Epimerase; Flavin Reductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Nucleoside-Diphosphate-Sugar Epimerases; Nucleoside-Diphosphate-Sugar Epimerase-Like; 3-Deoxy-7-Phosphoheptulonate Synthase Phe-Sensitive; Male Sterility-Like
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSETVLVIGATGSIGRHVVSEALNQGYLVKAFVRSESRARVLPAEAEIIVGDLLDPSSIEKAVKSVEGIIFTHGTSTRES DVRDVDYTGVANTLKAVKGKDVKIVLMTAVGTTRPGVAYAEWKRHGEQLVRASSHDYTIVRPGWFDYNNDDERQIVMLQG DTNQSGSPADGVIARDQIARVLVSSLNDAEARNKTFELSATHGVAQESLTATFATLQTDNSGKIEGILDTNIVPVESSAT LFQADLASISS
Sequences:
>Translated_251_residues MSETVLVIGATGSIGRHVVSEALNQGYLVKAFVRSESRARVLPAEAEIIVGDLLDPSSIEKAVKSVEGIIFTHGTSTRES DVRDVDYTGVANTLKAVKGKDVKIVLMTAVGTTRPGVAYAEWKRHGEQLVRASSHDYTIVRPGWFDYNNDDERQIVMLQG DTNQSGSPADGVIARDQIARVLVSSLNDAEARNKTFELSATHGVAQESLTATFATLQTDNSGKIEGILDTNIVPVESSAT LFQADLASISS >Mature_250_residues SETVLVIGATGSIGRHVVSEALNQGYLVKAFVRSESRARVLPAEAEIIVGDLLDPSSIEKAVKSVEGIIFTHGTSTRESD VRDVDYTGVANTLKAVKGKDVKIVLMTAVGTTRPGVAYAEWKRHGEQLVRASSHDYTIVRPGWFDYNNDDERQIVMLQGD TNQSGSPADGVIARDQIARVLVSSLNDAEARNKTFELSATHGVAQESLTATFATLQTDNSGKIEGILDTNIVPVESSATL FQADLASISS
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26919; Mature: 26788
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETVLVIGATGSIGRHVVSEALNQGYLVKAFVRSESRARVLPAEAEIIVGDLLDPSSIE CCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCEECCCCCEEEEECCCCHHHHH KAVKSVEGIIFTHGTSTRESDVRDVDYTGVANTLKAVKGKDVKIVLMTAVGTTRPGVAYA HHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCHHH EWKRHGEQLVRASSHDYTIVRPGWFDYNNDDERQIVMLQGDTNQSGSPADGVIARDQIAR HHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH VLVSSLNDAEARNKTFELSATHGVAQESLTATFATLQTDNSGKIEGILDTNIVPVESSAT HHHHHCCCHHHCCCEEEEECCCCCHHHHHHEEEEEEEECCCCCEEEEECCCEEEECCCCH LFQADLASISS HHHHHHHHCCC >Mature Secondary Structure SETVLVIGATGSIGRHVVSEALNQGYLVKAFVRSESRARVLPAEAEIIVGDLLDPSSIE CCEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCEECCCCCEEEEECCCCHHHHH KAVKSVEGIIFTHGTSTRESDVRDVDYTGVANTLKAVKGKDVKIVLMTAVGTTRPGVAYA HHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCHHH EWKRHGEQLVRASSHDYTIVRPGWFDYNNDDERQIVMLQGDTNQSGSPADGVIARDQIAR HHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH VLVSSLNDAEARNKTFELSATHGVAQESLTATFATLQTDNSGKIEGILDTNIVPVESSAT HHHHHCCCHHHCCCEEEEECCCCCHHHHHHEEEEEEEECCCCCEEEEECCCEEEECCCCH LFQADLASISS HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA