| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yvfT [H]
Identifier: 145295106
GI number: 145295106
Start: 1158047
End: 1159306
Strand: Direct
Name: yvfT [H]
Synonym: cgR_1049
Alternate gene names: 145295106
Gene position: 1158047-1159306 (Clockwise)
Preceding gene: 145295105
Following gene: 145295107
Centisome position: 34.94
GC content: 55.4
Gene sequence:
>1260_bases ATGAATAAAGATTTCTGGACCGCAGGCCGGACCGCCCGCTGGTTTTCGCGCGGGGTTTCCCTTTTAGCCAGCCCAGTTAC CGCCCCACTGAACTCTTGGCGGAGATTGCCTAACTTGGCCAAGTACACCCTCTACACCAGGGTGTCGTTGCAAGCGATCC CCGTGGTGTTGCTGTCGGCGTATTTCCTGGGCATCGTAGCTAATGCAGGCACCCTGAATCCCTCATTTGTGTGGCTGCTG GGTTTCTGGGTCATCCTTTTAATAGTGACGGTGCTGGTTTATGAATATCAGCCGTCCCTGAATTCTCATCCCAGGCGCAG CGTACAGCCGTTCTTTTTTACCGGGTTGGTGCTCAACGTTTTAGGCGTTGTGGCGTCTGTGGTGCTTCAACTCCCAGCCC TTAATAGCTCTGAAAGTACCCGAGCAACTGCCCTTATTTTCACTCTTACCTGCGTATTTCTGCTTTCGATCGCCTACATT CCGTGGATGAATTACCGATGGGTTTGGCTGATCGCAATGTCTACAGTGTTGTGGTGGACCAGCACAACGACTGATTATTT AAGTGCATTGTGGGTGGTTATCCCGCCACTCATGGCAGGAACCGTCCGACTTTCCGTATGGACCGTCGATGTCATGAAAG AGGTTGAGCGTTCCCGCGAATTGGAAGCCTCCCTCCGCGTCACCGAAGAACGCCTTCGTTTCGCCCAGGAACTCCACGAC ACTTTAGGACAACACCTGGCGGCAATGTCCGTGAAATCAGAACTGGCGCTTGCCCTGGCGAAACGCGGCGACGACCGCCT CGAAAAGGAGCTGCGTGAGCTCCAAAAACTCACCCGCACCTCCATGTCGGAAATGCGCGACGTCGTCTCCGGCTACCGCA CCGTCAACCTTGCCACGGAAATCGAGGGCGCTAAAAGTTTGCTTGCCGACGCCCACATCCACCTTTCCGTCATCGGCACC ACGTCCCAGGTGTCACCCGCTCACCGAGAACTGTGCGCGTGGCTTGTCCGCGAGGCCACCACAAACATCCTGCGCCACTC CGATGCAACGGATGTCACCCTCATGTTGAGCAGCACAGAAGTGCGCATGGACAACAATGGTGTGAACAAGGACATCGGCA GACTCTCTGGTCTCAGCGCCCTGCGCACACGAGCGGAATCAGCCGGAATGACGCTCATTGTGTCCCGCGAAGACGACCAG TTCAGCGTCCGCATGCTCATTAATGCACCTGCAAATACACCTGCAGAAAAGGAAGCTTAA
Upstream 100 bases:
>100_bases GACAGCTGCAGCTGTGTGGGCGGCGAACCGCTACATGCGCTGGGACTCGTACCGCTAAGCCTGCAGCCGACGGGATTAAG GCAGCTAACATTGAGACACG
Downstream 100 bases:
>100_bases ATGATTTCCATTTCCATCGCCGATGACGAAGCCCTGATCGCAAGCTCTCTGGCAACTTTGCTCAGTTTGGAACCCGATTT AGACGTCCGACTTACCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MNKDFWTAGRTARWFSRGVSLLASPVTAPLNSWRRLPNLAKYTLYTRVSLQAIPVVLLSAYFLGIVANAGTLNPSFVWLL GFWVILLIVTVLVYEYQPSLNSHPRRSVQPFFFTGLVLNVLGVVASVVLQLPALNSSESTRATALIFTLTCVFLLSIAYI PWMNYRWVWLIAMSTVLWWTSTTTDYLSALWVVIPPLMAGTVRLSVWTVDVMKEVERSRELEASLRVTEERLRFAQELHD TLGQHLAAMSVKSELALALAKRGDDRLEKELRELQKLTRTSMSEMRDVVSGYRTVNLATEIEGAKSLLADAHIHLSVIGT TSQVSPAHRELCAWLVREATTNILRHSDATDVTLMLSSTEVRMDNNGVNKDIGRLSGLSALRTRAESAGMTLIVSREDDQ FSVRMLINAPANTPAEKEA
Sequences:
>Translated_419_residues MNKDFWTAGRTARWFSRGVSLLASPVTAPLNSWRRLPNLAKYTLYTRVSLQAIPVVLLSAYFLGIVANAGTLNPSFVWLL GFWVILLIVTVLVYEYQPSLNSHPRRSVQPFFFTGLVLNVLGVVASVVLQLPALNSSESTRATALIFTLTCVFLLSIAYI PWMNYRWVWLIAMSTVLWWTSTTTDYLSALWVVIPPLMAGTVRLSVWTVDVMKEVERSRELEASLRVTEERLRFAQELHD TLGQHLAAMSVKSELALALAKRGDDRLEKELRELQKLTRTSMSEMRDVVSGYRTVNLATEIEGAKSLLADAHIHLSVIGT TSQVSPAHRELCAWLVREATTNILRHSDATDVTLMLSSTEVRMDNNGVNKDIGRLSGLSALRTRAESAGMTLIVSREDDQ FSVRMLINAPANTPAEKEA >Mature_419_residues MNKDFWTAGRTARWFSRGVSLLASPVTAPLNSWRRLPNLAKYTLYTRVSLQAIPVVLLSAYFLGIVANAGTLNPSFVWLL GFWVILLIVTVLVYEYQPSLNSHPRRSVQPFFFTGLVLNVLGVVASVVLQLPALNSSESTRATALIFTLTCVFLLSIAYI PWMNYRWVWLIAMSTVLWWTSTTTDYLSALWVVIPPLMAGTVRLSVWTVDVMKEVERSRELEASLRVTEERLRFAQELHD TLGQHLAAMSVKSELALALAKRGDDRLEKELRELQKLTRTSMSEMRDVVSGYRTVNLATEIEGAKSLLADAHIHLSVIGT TSQVSPAHRELCAWLVREATTNILRHSDATDVTLMLSSTEVRMDNNGVNKDIGRLSGLSALRTRAESAGMTLIVSREDDQ FSVRMLINAPANTPAEKEA
Specific function: Member of the two-component regulatory system yvfT/yvfU. Probably activates yvfU by phosphorylation [H]
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011712 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 46809; Mature: 46809
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKDFWTAGRTARWFSRGVSLLASPVTAPLNSWRRLPNLAKYTLYTRVSLQAIPVVLLSA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YFLGIVANAGTLNPSFVWLLGFWVILLIVTVLVYEYQPSLNSHPRRSVQPFFFTGLVLNV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH LGVVASVVLQLPALNSSESTRATALIFTLTCVFLLSIAYIPWMNYRWVWLIAMSTVLWWT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC STTTDYLSALWVVIPPLMAGTVRLSVWTVDVMKEVERSRELEASLRVTEERLRFAQELHD CCHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGQHLAAMSVKSELALALAKRGDDRLEKELRELQKLTRTSMSEMRDVVSGYRTVNLATE HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEHHHH IEGAKSLLADAHIHLSVIGTTSQVSPAHRELCAWLVREATTNILRHSDATDVTLMLSSTE HHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCE VRMDNNGVNKDIGRLSGLSALRTRAESAGMTLIVSREDDQFSVRMLINAPANTPAEKEA EEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MNKDFWTAGRTARWFSRGVSLLASPVTAPLNSWRRLPNLAKYTLYTRVSLQAIPVVLLSA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YFLGIVANAGTLNPSFVWLLGFWVILLIVTVLVYEYQPSLNSHPRRSVQPFFFTGLVLNV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH LGVVASVVLQLPALNSSESTRATALIFTLTCVFLLSIAYIPWMNYRWVWLIAMSTVLWWT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC STTTDYLSALWVVIPPLMAGTVRLSVWTVDVMKEVERSRELEASLRVTEERLRFAQELHD CCHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLGQHLAAMSVKSELALALAKRGDDRLEKELRELQKLTRTSMSEMRDVVSGYRTVNLATE HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEHHHH IEGAKSLLADAHIHLSVIGTTSQVSPAHRELCAWLVREATTNILRHSDATDVTLMLSSTE HHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCE VRMDNNGVNKDIGRLSGLSALRTRAESAGMTLIVSREDDQFSVRMLINAPANTPAEKEA EEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]