Click here to switch to the map view.

The map label for this gene is 145294966

Identifier: 145294966

GI number: 145294966

Start: 1004360

End: 1004677

Strand: Reverse

Name: 145294966

Synonym: cgR_0911

Alternate gene names: NA

Gene position: 1004677-1004360 (Counterclockwise)

Preceding gene: 145294968

Following gene: 145294960

Centisome position: 30.31

GC content: 67.3

Gene sequence:

>318_bases
ATGCTGCTTGCCGACGACACCGTGCTGGTCGGCACCGCCCCCGAGGTCCTCAACGCCGGTGTGGAGTTGTGCCGTGAGAC
CGAGCCTTTCTGCGCCGCCTACCGCATGGGCCAGCGCCTCGTGACGTCAATCTGCCTGGCTCGGCACCCTGACGGCCGGT
ACCTGGTTCTCAACCCCTGCGGGGTCTGCCGGGAGCGTCTCGCGATCCACGGTCCGGGCGTCATGGTCGCCGTGGCACAC
CCGGACGATCCCACGACCCCGACGTGGAAGAGGCTCAAGGACGTTCACCTCGACTACTGGGTGACACCGGCAGTGTAA

Upstream 100 bases:

>100_bases
GGGGAAGCCCGAGCCCTCTGGGCCCGGGCTTTTTGATGAATTCCAGGCCTCCATCGAATCGGGTTTCCCCGCCGCTGAGG
GCTTTCCGGGCGCCGCGGCG

Downstream 100 bases:

>100_bases
AAGAGGAAAACCCCAGACCAGTGATGGTCTGGGGTTTTCCTCCTCGGTGGAGCTGCCGGGAATTGAACCCGGGTCCTACG
TCACCTCGCCAGGGCTTCTC

Product: cytidine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MLLADDTVLVGTAPEVLNAGVELCRETEPFCAAYRMGQRLVTSICLARHPDGRYLVLNPCGVCRERLAIHGPGVMVAVAH
PDDPTTPTWKRLKDVHLDYWVTPAV

Sequences:

>Translated_105_residues
MLLADDTVLVGTAPEVLNAGVELCRETEPFCAAYRMGQRLVTSICLARHPDGRYLVLNPCGVCRERLAIHGPGVMVAVAH
PDDPTTPTWKRLKDVHLDYWVTPAV
>Mature_105_residues
MLLADDTVLVGTAPEVLNAGVELCRETEPFCAAYRMGQRLVTSICLARHPDGRYLVLNPCGVCRERLAIHGPGVMVAVAH
PDDPTTPTWKRLKDVHLDYWVTPAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11552; Mature: 11552

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLADDTVLVGTAPEVLNAGVELCRETEPFCAAYRMGQRLVTSICLARHPDGRYLVLNPC
CEECCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCH
GVCRERLAIHGPGVMVAVAHPDDPTTPTWKRLKDVHLDYWVTPAV
HHHHHHHEECCCCEEEEEECCCCCCCCHHHHHHHCCCCEEEECCC
>Mature Secondary Structure
MLLADDTVLVGTAPEVLNAGVELCRETEPFCAAYRMGQRLVTSICLARHPDGRYLVLNPC
CEECCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCH
GVCRERLAIHGPGVMVAVAHPDDPTTPTWKRLKDVHLDYWVTPAV
HHHHHHHEECCCCEEEEEECCCCCCCCHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA