| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yeaO [H]
Identifier: 145294965
GI number: 145294965
Start: 1003497
End: 1003850
Strand: Direct
Name: yeaO [H]
Synonym: cgR_0910
Alternate gene names: 145294965
Gene position: 1003497-1003850 (Clockwise)
Preceding gene: 145294964
Following gene: 145294967
Centisome position: 30.28
GC content: 54.8
Gene sequence:
>354_bases ATGAGTATTCACATCGCAAAAGTCCACGACGTCCTCAAAGGTGAAAAAACCTACGGAACCACCATTTTGGTGGATCGGCT CTGGCCACGCGGTGTGAAAAAAGACGACCTTGAGCCAGACCTCTGGCTCAAAGGCGTCGCCCCCACAATCGAACTCCGAA AATGGTTCGGCCACGACCCAGCTAAATTCTCCGAATTCAGCACCCGTTACACCGAAGAGCTCAACGCCAGCAACGACAAA GACCTAGAGACGCTTGTCGACGCCACCTCCCGCCACCCCGTAACCCTCCTCTACGGTGCTGCCGACCGCGACCACAACCA CGCCATTGTTCTCGCCAAGTGGCTAAAGAAATAA
Upstream 100 bases:
>100_bases TAAGCAGGATTACGACAAGCGCCAAGATATCAAGCGTCGCACCGAAGAACGCGAAGTCACCCGTGAGCTCGGCCGTCGCA TTAAGGGAATCAACGCGTAA
Downstream 100 bases:
>100_bases CTCCTTGCAAATAGTTGCAAATTTAAGTTATGATGAACCATCTTGTGGAACTCGCACGAGCCCACCACAGGAATCAGTAA GAATCAATGGGGCTGACATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSIHIAKVHDVLKGEKTYGTTILVDRLWPRGVKKDDLEPDLWLKGVAPTIELRKWFGHDPAKFSEFSTRYTEELNASNDK DLETLVDATSRHPVTLLYGAADRDHNHAIVLAKWLKK
Sequences:
>Translated_117_residues MSIHIAKVHDVLKGEKTYGTTILVDRLWPRGVKKDDLEPDLWLKGVAPTIELRKWFGHDPAKFSEFSTRYTEELNASNDK DLETLVDATSRHPVTLLYGAADRDHNHAIVLAKWLKK >Mature_116_residues SIHIAKVHDVLKGEKTYGTTILVDRLWPRGVKKDDLEPDLWLKGVAPTIELRKWFGHDPAKFSEFSTRYTEELNASNDKD LETLVDATSRHPVTLLYGAADRDHNHAIVLAKWLKK
Specific function: Unknown
COG id: COG3189
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3073c [H]
Homologues:
Organism=Escherichia coli, GI87081976, Length=116, Percent_Identity=43.1034482758621, Blast_Score=96, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007438 [H]
Pfam domain/function: PF04343 DUF488 [H]
EC number: NA
Molecular weight: Translated: 13391; Mature: 13260
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIHIAKVHDVLKGEKTYGTTILVDRLWPRGVKKDDLEPDLWLKGVAPTIELRKWFGHDP CEEEHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCC AKFSEFSTRYTEELNASNDKDLETLVDATSRHPVTLLYGAADRDHNHAIVLAKWLKK CHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEHHHCC >Mature Secondary Structure SIHIAKVHDVLKGEKTYGTTILVDRLWPRGVKKDDLEPDLWLKGVAPTIELRKWFGHDP EEEHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCC AKFSEFSTRYTEELNASNDKDLETLVDATSRHPVTLLYGAADRDHNHAIVLAKWLKK CHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]