Click here to switch to the map view.

The map label for this gene is lpqB

Identifier: 145294919

GI number: 145294919

Start: 953257

End: 954963

Strand: Direct

Name: lpqB

Synonym: cgR_0865

Alternate gene names: 145294919

Gene position: 953257-954963 (Clockwise)

Preceding gene: 145294918

Following gene: 145294920

Centisome position: 28.76

GC content: 58.23

Gene sequence:

>1707_bases
GTGAGTAAAATTTCGACGAAACTGAAGGCCCTCTCCGCGGTGCTGTCTGTGACAACTCTGGTGGCTGGGTGTTCCACGCT
TCCGCAGAACACGGATCCGCAAGTGCTGCGCTCATTTTCCGGGTCCCAAAGCACACAAGAGATAGCAGGGCCGACCCCGA
ATCAAGATCCGGATTTGTTGATCCGCGGCTTCTTCAGCGCAGGTGCGTATCCAACTCAGCAGTATGAAGCAGCGAAGGCG
TATCTGACGGAAGGGACGCGCAGCACGTGGAATCCGGCTGCGTCGACTCGTATTTTGGATCGCATTGATCTGAACACTCT
GCCAGGTTCGACGAATGCGGAACGAACGATTGCGATCCGTGGAACGCAGGTCGGAACGTTGCTCAGCGGTGGCGTGTATC
AGCCGGAGAATGCGGAGTTTGAAGCTGAGATCACGATGCGTCGGGAAGATGGGGAGTGGCGTATCGATGCTTTGCCAGAC
GGGATTTTATTAGAGAGAAACGATCTGCGGAACCATTACACTCCGCACGATGTGTATTTCTTTGATCCTTCTGGCCAGGT
GTTGGTGGGGGATCGGCGTTGGTTGTTCAATGAGTCGCAGTCGATGTCCACGGTGCTGATGGCCCTTCTGGTTAATGGTC
CTTCGCCGGCAATTTCTCCTGGTGTGGTCAATCAGCTGTCCACGGATGCGTCGTTCGTGGGGTTCAACGATGGGGAGTAT
CAGTTCACTGGTTTGGGAAATTTGGATGATGATGCGCGTTTGCGTTTCGCTGCCCAGGCCGTGTGGACGTTGGCGCATGC
TGATGTCGCAGGCCCCTACACTTTGGTCGCTGACGGCGCGCCGTTGCTGTCGGAGTTCCCAACGCTCACCACCGATGACC
TCGCCGAATACAACCCAGAGGCCTACACCAACACGGTGTCCACGTTGTTTGCGTTGCAGGATGGATCGTTGTCGAGGGTC
AGTTCCGGCAATGTTAGTCCACTACAGGGCATTTGGAGCGGTGGAGATATCGATTCTGCAGCGATTTCCTCCTCCGCCAA
TGTGGTGGCAGCGGTACGCCACGAAAGCAACGAGGCAGTGCTTACTGTTGGCTCCATGGAAGGCGTGACTTCAGATGTGT
TGAGGAGTGAAACGATCACTCGTCCCACCTTTGAATACGCGTCGAGTGGGTTGTGGGCTGTGGTGGATGGGGAGACGCCT
GTTCGAGTCGCACGATCGGCAACAACCGGTGAGCTCGTCCAGACGGAGGCGGAGATTGTGCTGCCAAGGGATGTGACGGG
TCCGATCTCTGAATTCCAACTGTCACGAACTGGGGTCCGGGCCGCCATGATCATTGAAGGCAAGGTGTACGTGGGCGTCG
TAACGCGTCCTGGTCCGGGTGAGCGGCGCGTGACAAATATCACGGAGGTGGCGCCGAGCTTGGGCGAGGCGGCGCTGTCG
ATCAACTGGCGCCCGGACGGCATTTTGCTGGTCGGCACGTCGATTCCGGAGACTCCGCTGTGGCGCGTCGAGCAGGACGG
ATCGGCGATATCGTCGACGCCGAGCGGGAATCTCAGCGCGCCGGTGGTGGCGGTGGCAAGTTCCGCGACGACGATCTATG
TCACCGATTCGCATGCGATGCTGCAGCTGCCGACTGCCGATAATGATATTTGGCGCGAGGTGCCCGGTTTGCTGGGCACG
CGTGCGGCGCCGGTGGTTGCGTACTGA

Upstream 100 bases:

>100_bases
CCATTTTCCGTTTGGTCTTGCCTAAAGAGCCGCATGGAAATTATCGTGAAGCACCGATCCCGTTGATCGCTCCAGAGACA
CCGTGGGAAGGGGAGCAGCA

Downstream 100 bases:

>100_bases
TGGAGCTGTTCTTCCCGCGCGCATGTGGTGGTTGTGGGGCGCCGGGGGCGTCGTTATGCAGTGACTGCCAGCGTGTGTGG
AGGAAGCCGCCAACATTGGC

Product: lipoprotein LpqB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 567

Protein sequence:

>568_residues
MSKISTKLKALSAVLSVTTLVAGCSTLPQNTDPQVLRSFSGSQSTQEIAGPTPNQDPDLLIRGFFSAGAYPTQQYEAAKA
YLTEGTRSTWNPAASTRILDRIDLNTLPGSTNAERTIAIRGTQVGTLLSGGVYQPENAEFEAEITMRREDGEWRIDALPD
GILLERNDLRNHYTPHDVYFFDPSGQVLVGDRRWLFNESQSMSTVLMALLVNGPSPAISPGVVNQLSTDASFVGFNDGEY
QFTGLGNLDDDARLRFAAQAVWTLAHADVAGPYTLVADGAPLLSEFPTLTTDDLAEYNPEAYTNTVSTLFALQDGSLSRV
SSGNVSPLQGIWSGGDIDSAAISSSANVVAAVRHESNEAVLTVGSMEGVTSDVLRSETITRPTFEYASSGLWAVVDGETP
VRVARSATTGELVQTEAEIVLPRDVTGPISEFQLSRTGVRAAMIIEGKVYVGVVTRPGPGERRVTNITEVAPSLGEAALS
INWRPDGILLVGTSIPETPLWRVEQDGSAISSTPSGNLSAPVVAVASSATTIYVTDSHAMLQLPTADNDIWREVPGLLGT
RAAPVVAY

Sequences:

>Translated_568_residues
MSKISTKLKALSAVLSVTTLVAGCSTLPQNTDPQVLRSFSGSQSTQEIAGPTPNQDPDLLIRGFFSAGAYPTQQYEAAKA
YLTEGTRSTWNPAASTRILDRIDLNTLPGSTNAERTIAIRGTQVGTLLSGGVYQPENAEFEAEITMRREDGEWRIDALPD
GILLERNDLRNHYTPHDVYFFDPSGQVLVGDRRWLFNESQSMSTVLMALLVNGPSPAISPGVVNQLSTDASFVGFNDGEY
QFTGLGNLDDDARLRFAAQAVWTLAHADVAGPYTLVADGAPLLSEFPTLTTDDLAEYNPEAYTNTVSTLFALQDGSLSRV
SSGNVSPLQGIWSGGDIDSAAISSSANVVAAVRHESNEAVLTVGSMEGVTSDVLRSETITRPTFEYASSGLWAVVDGETP
VRVARSATTGELVQTEAEIVLPRDVTGPISEFQLSRTGVRAAMIIEGKVYVGVVTRPGPGERRVTNITEVAPSLGEAALS
INWRPDGILLVGTSIPETPLWRVEQDGSAISSTPSGNLSAPVVAVASSATTIYVTDSHAMLQLPTADNDIWREVPGLLGT
RAAPVVAY
>Mature_567_residues
SKISTKLKALSAVLSVTTLVAGCSTLPQNTDPQVLRSFSGSQSTQEIAGPTPNQDPDLLIRGFFSAGAYPTQQYEAAKAY
LTEGTRSTWNPAASTRILDRIDLNTLPGSTNAERTIAIRGTQVGTLLSGGVYQPENAEFEAEITMRREDGEWRIDALPDG
ILLERNDLRNHYTPHDVYFFDPSGQVLVGDRRWLFNESQSMSTVLMALLVNGPSPAISPGVVNQLSTDASFVGFNDGEYQ
FTGLGNLDDDARLRFAAQAVWTLAHADVAGPYTLVADGAPLLSEFPTLTTDDLAEYNPEAYTNTVSTLFALQDGSLSRVS
SGNVSPLQGIWSGGDIDSAAISSSANVVAAVRHESNEAVLTVGSMEGVTSDVLRSETITRPTFEYASSGLWAVVDGETPV
RVARSATTGELVQTEAEIVLPRDVTGPISEFQLSRTGVRAAMIIEGKVYVGVVTRPGPGERRVTNITEVAPSLGEAALSI
NWRPDGILLVGTSIPETPLWRVEQDGSAISSTPSGNLSAPVVAVASSATTIYVTDSHAMLQLPTADNDIWREVPGLLGTR
AAPVVAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lpqB lipoprotein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPQB_CORGB (A4QC91)

Other databases:

- EMBL:   AP009044
- RefSeq:   YP_001137740.1
- STRING:   A4QC91
- GeneID:   4992123
- GenomeReviews:   AP009044_GR
- KEGG:   cgt:cgR_0865
- eggNOG:   NOG05516
- HOGENOM:   HBG565340
- OMA:   WREVPGL
- ProtClustDB:   PRK13616
- HAMAP:   MF_01373
- InterPro:   IPR019606
- InterPro:   IPR018910
- SMART:   SM00909

Pfam domain/function: PF10646 Germane; PF10647 Gmad1

EC number: NA

Molecular weight: Translated: 60480; Mature: 60349

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKISTKLKALSAVLSVTTLVAGCSTLPQNTDPQVLRSFSGSQSTQEIAGPTPNQDPDLL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHCCCCCCCCCCCE
IRGFFSAGAYPTQQYEAAKAYLTEGTRSTWNPAASTRILDRIDLNTLPGSTNAERTIAIR
EEEHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEE
GTQVGTLLSGGVYQPENAEFEAEITMRREDGEWRIDALPDGILLERNDLRNHYTPHDVYF
CCEECHHHCCCEECCCCCCEEEEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCEEEE
FDPSGQVLVGDRRWLFNESQSMSTVLMALLVNGPSPAISPGVVNQLSTDASFVGFNDGEY
ECCCCCEEECCCEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCCE
QFTGLGNLDDDARLRFAAQAVWTLAHADVAGPYTLVADGAPLLSEFPTLTTDDLAEYNPE
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCHHHHHCCCH
AYTNTVSTLFALQDGSLSRVSSGNVSPLQGIWSGGDIDSAAISSSANVVAAVRHESNEAV
HHHHHHHEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCEEEEEEECCCCEE
LTVGSMEGVTSDVLRSETITRPTFEYASSGLWAVVDGETPVRVARSATTGELVQTEAEIV
EEECCCCCCHHHHHHHHCCCCCCHHHHCCCEEEEECCCCCEEEECCCCCCHHEECCCEEE
LPRDVTGPISEFQLSRTGVRAAMIIEGKVYVGVVTRPGPGERRVTNITEVAPSLGEAALS
ECCCCCCCHHHHHHHHCCCEEEEEEECEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
INWRPDGILLVGTSIPETPLWRVEQDGSAISSTPSGNLSAPVVAVASSATTIYVTDSHAM
EEECCCCEEEEECCCCCCCCEEEECCCCEECCCCCCCCCCCEEEEECCCEEEEEECCCEE
LQLPTADNDIWREVPGLLGTRAAPVVAY
EEECCCCCHHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure 
SKISTKLKALSAVLSVTTLVAGCSTLPQNTDPQVLRSFSGSQSTQEIAGPTPNQDPDLL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHCCCCCCCCCCCE
IRGFFSAGAYPTQQYEAAKAYLTEGTRSTWNPAASTRILDRIDLNTLPGSTNAERTIAIR
EEEHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEE
GTQVGTLLSGGVYQPENAEFEAEITMRREDGEWRIDALPDGILLERNDLRNHYTPHDVYF
CCEECHHHCCCEECCCCCCEEEEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCEEEE
FDPSGQVLVGDRRWLFNESQSMSTVLMALLVNGPSPAISPGVVNQLSTDASFVGFNDGEY
ECCCCCEEECCCEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEECCCCCE
QFTGLGNLDDDARLRFAAQAVWTLAHADVAGPYTLVADGAPLLSEFPTLTTDDLAEYNPE
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCHHHHHCCCH
AYTNTVSTLFALQDGSLSRVSSGNVSPLQGIWSGGDIDSAAISSSANVVAAVRHESNEAV
HHHHHHHEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCEEEEEEECCCCEE
LTVGSMEGVTSDVLRSETITRPTFEYASSGLWAVVDGETPVRVARSATTGELVQTEAEIV
EEECCCCCCHHHHHHHHCCCCCCHHHHCCCEEEEECCCCCEEEECCCCCCHHEECCCEEE
LPRDVTGPISEFQLSRTGVRAAMIIEGKVYVGVVTRPGPGERRVTNITEVAPSLGEAALS
ECCCCCCCHHHHHHHHCCCEEEEEEECEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
INWRPDGILLVGTSIPETPLWRVEQDGSAISSTPSGNLSAPVVAVASSATTIYVTDSHAM
EEECCCCEEEEECCCCCCCCEEEECCCCEECCCCCCCCCCCEEEEECCCEEEEEECCCEE
LQLPTADNDIWREVPGLLGTRAAPVVAY
EEECCCCCHHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA