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The map label for this gene is yciC [H]

Identifier: 145294865

GI number: 145294865

Start: 899083

End: 900171

Strand: Reverse

Name: yciC [H]

Synonym: cgR_0812

Alternate gene names: 145294865

Gene position: 900171-899083 (Counterclockwise)

Preceding gene: 145294870

Following gene: 145294859

Centisome position: 27.16

GC content: 58.03

Gene sequence:

>1089_bases
ATGGTCACAACGACCCCAGTCACCGTGCTATCCGGATTTCTGGGCTCCGGAAAAACCACATTGCTCAACCAGATCCTCCA
CCACCGAGGATCCCGGAAAATCGCAGTCATTGTCAACGATTTTTCAGAAATCAACATCGACGCAGCCCTCATCGCATCCG
AAGGCCACCTCACCCGCGGCGAAGACCGCTTCGTGGAACTGACCAACGGATGCATCTGCTACACCCTGCGCGAAGACCTC
GTGGATTCCATCGGCGAACTCGCCAGCAGCGACCGCTTCGACCACATCGTCATCGAATCCACGGGTATCTCCGAACCAAT
GCCGGTAGCCGCCACATTTGAATGGCAGTGGGATGACGGCACCCGCCTGGCTGACAAAGCACCGATCGACACCATGGTCA
CCCTGGTCGATGCCACCCAATTCATCGACCTCATCCGCAAAAACACCTCCCTCACCGACGCCGACATGGGCGCAACCGAG
GACGATGAACGCACCATCGCCGACCTACTCACCGATCAAATCGAGTTCGCCGACCGCATCTACATCACCAAATCCGACCT
GGTGGACCGCACTGTCCTCGAGCAAACCCGCGCACTAATCGCCAGCATGAATCCACGCGCCCGCATTGACTTACTCATCG
ATGGCCTCAATGACGGCTCCCCCATCACCGACGATATTCTCGGCGCTTTCCTCTACGACGAAGCCACCGCCCGCGCCTAC
GAGGGTTACACGGAAGAACTCGAAAACCCGCACACTCCCGAAACCGAGGAATACGGCATCAGCTCCGTGGTATTCCGCTC
TGACCGGCCATTCAACAAAGACCGCCTACTTCAGGTACTGCGTTCCACCACCGGACTCGTTCGTTCCAAAGGCTATTGCT
GGATCGCTGATCACCTCGACATCGTCCAAGTCTGGCACCAAGCCGGCCCCAATTTAAGCATTCGCCCGGCCGCTTATTGG
GCCAATTCAGAGATCACCCCCGGCACCGAATTGGTTCTGATCGGCATCCACATCGACGGCCCCACCTTGCTCGCACTGCT
ACAAGGCGCGACGCTTACCGATGCGGAAGTGGCGGCACTGGTTTTGTGA

Upstream 100 bases:

>100_bases
AAGGTCAAAAAAACTTGACCTTATTGATAACGATTTCTATTAAGAAGTGTACACTTGCGTTGACTCTATTGAAAATGATT
CCCAAGAGGAGGGCTTTCCC

Downstream 100 bases:

>100_bases
GTTCCTCAAGTCCGTGAATTCCACAGTGACTTCGCTCGTAAAGGCAGCGTAAAGGCAGTGACCCCGAAGGAATTTCCGGG
GTTCTTCCTCAAGCCCAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MVTTTPVTVLSGFLGSGKTTLLNQILHHRGSRKIAVIVNDFSEINIDAALIASEGHLTRGEDRFVELTNGCICYTLREDL
VDSIGELASSDRFDHIVIESTGISEPMPVAATFEWQWDDGTRLADKAPIDTMVTLVDATQFIDLIRKNTSLTDADMGATE
DDERTIADLLTDQIEFADRIYITKSDLVDRTVLEQTRALIASMNPRARIDLLIDGLNDGSPITDDILGAFLYDEATARAY
EGYTEELENPHTPETEEYGISSVVFRSDRPFNKDRLLQVLRSTTGLVRSKGYCWIADHLDIVQVWHQAGPNLSIRPAAYW
ANSEITPGTELVLIGIHIDGPTLLALLQGATLTDAEVAALVL

Sequences:

>Translated_362_residues
MVTTTPVTVLSGFLGSGKTTLLNQILHHRGSRKIAVIVNDFSEINIDAALIASEGHLTRGEDRFVELTNGCICYTLREDL
VDSIGELASSDRFDHIVIESTGISEPMPVAATFEWQWDDGTRLADKAPIDTMVTLVDATQFIDLIRKNTSLTDADMGATE
DDERTIADLLTDQIEFADRIYITKSDLVDRTVLEQTRALIASMNPRARIDLLIDGLNDGSPITDDILGAFLYDEATARAY
EGYTEELENPHTPETEEYGISSVVFRSDRPFNKDRLLQVLRSTTGLVRSKGYCWIADHLDIVQVWHQAGPNLSIRPAAYW
ANSEITPGTELVLIGIHIDGPTLLALLQGATLTDAEVAALVL
>Mature_362_residues
MVTTTPVTVLSGFLGSGKTTLLNQILHHRGSRKIAVIVNDFSEINIDAALIASEGHLTRGEDRFVELTNGCICYTLREDL
VDSIGELASSDRFDHIVIESTGISEPMPVAATFEWQWDDGTRLADKAPIDTMVTLVDATQFIDLIRKNTSLTDADMGATE
DDERTIADLLTDQIEFADRIYITKSDLVDRTVLEQTRALIASMNPRARIDLLIDGLNDGSPITDDILGAFLYDEATARAY
EGYTEELENPHTPETEEYGISSVVFRSDRPFNKDRLLQVLRSTTGLVRSKGYCWIADHLDIVQVWHQAGPNLSIRPAAYW
ANSEITPGTELVLIGIHIDGPTLLALLQGATLTDAEVAALVL

Specific function: May bind GTP. Might act as metal chaperone (Potential). Contributes to optimal growth under starvation for zinc [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=218, Percent_Identity=33.0275229357798, Blast_Score=108, Evalue=8e-24,
Organism=Homo sapiens, GI126722884, Length=218, Percent_Identity=33.0275229357798, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI223941779, Length=208, Percent_Identity=33.1730769230769, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI146231952, Length=381, Percent_Identity=28.3464566929134, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI148727351, Length=381, Percent_Identity=27.5590551181102, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI223941776, Length=209, Percent_Identity=32.0574162679426, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI119120938, Length=137, Percent_Identity=36.4963503649635, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI87082430, Length=358, Percent_Identity=28.7709497206704, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788499, Length=196, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324356, Length=213, Percent_Identity=30.9859154929577, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 39860; Mature: 39860

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTTTPVTVLSGFLGSGKTTLLNQILHHRGSRKIAVIVNDFSEINIDAALIASEGHLTRG
CCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCC
EDRFVELTNGCICYTLREDLVDSIGELASSDRFDHIVIESTGISEPMPVAATFEWQWDDG
CCCEEEECCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEECCCC
TRLADKAPIDTMVTLVDATQFIDLIRKNTSLTDADMGATEDDERTIADLLTDQIEFADRI
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEE
YITKSDLVDRTVLEQTRALIASMNPRARIDLLIDGLNDGSPITDDILGAFLYDEATARAY
EEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
EGYTEELENPHTPETEEYGISSVVFRSDRPFNKDRLLQVLRSTTGLVRSKGYCWIADHLD
CCHHHHHCCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHH
IVQVWHQAGPNLSIRPAAYWANSEITPGTELVLIGIHIDGPTLLALLQGATLTDAEVAAL
HHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCHHHHHHHCCCCCCCHHHHEE
VL
EC
>Mature Secondary Structure
MVTTTPVTVLSGFLGSGKTTLLNQILHHRGSRKIAVIVNDFSEINIDAALIASEGHLTRG
CCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCC
EDRFVELTNGCICYTLREDLVDSIGELASSDRFDHIVIESTGISEPMPVAATFEWQWDDG
CCCEEEECCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEECCCC
TRLADKAPIDTMVTLVDATQFIDLIRKNTSLTDADMGATEDDERTIADLLTDQIEFADRI
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEE
YITKSDLVDRTVLEQTRALIASMNPRARIDLLIDGLNDGSPITDDILGAFLYDEATARAY
EEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
EGYTEELENPHTPETEEYGISSVVFRSDRPFNKDRLLQVLRSTTGLVRSKGYCWIADHLD
CCHHHHHCCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHH
IVQVWHQAGPNLSIRPAAYWANSEITPGTELVLIGIHIDGPTLLALLQGATLTDAEVAAL
HHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCHHHHHHHCCCCCCCHHHHEE
VL
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 9811636 [H]