| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is manB [C]
Identifier: 145294859
GI number: 145294859
Start: 888947
End: 890674
Strand: Reverse
Name: manB [C]
Synonym: cgR_0806
Alternate gene names: 145294859
Gene position: 890674-888947 (Counterclockwise)
Preceding gene: 145294865
Following gene: 145294856
Centisome position: 26.87
GC content: 54.34
Gene sequence:
>1728_bases ATGAGGCAACCTGCGCACCAATTTCCATCACGTGAAATACCTTTCTGTTTTGTCCGCAGGCGTATCAGGAAAACCTGCAG CGCGGTAGAGTCGAGTCTAATAGTGATCCCACGAAAACAAAGGATCGGGGTGTTCATGGACGAGTCTCGTCAGCTTAGTT TCGGCACAGCAGGGTTGCGTGCACCAGTTGGCCCGGCGCGCCATCAGATGAATGTTTTGCAGGTAACCAGAACTACAGCA GGTGTTGCTAGTTGGTTGGCAGAACGTGCGGCACTAAATCCAGTGCCGCATTTGGTTCCTGAGGATGAAACAGGAATCGG CAGGGCGTTGTATCCCCAAGATGGTCCGTTGCGGGTCGTTGTGGGGTATGACGCTCGCTATGGTTCGCATACTTTTGCTG CAACCACTGCGGAGGTGTTCGCGGGTGCTGGTTTTGAGGTGACGTTGCTCCCCACGCCTAGCCCTACGCCGTTGATTCCG TGGTTGGTGAACAAGCATGGGTTGGATGCGGGCGTTCAGATCACGGCTTCGCATAATGGTGCGGCGGACAATGGCTACAA GGTGTTTTTGTCTAATGGTCGCCAGCTTTATTCTGAACTGGAGCCTGAGCTTGAGGCGCATATCAATGCTGTGGAAGATC CGATTCGGGTTCCTCGGGTGACGGTGCGCCCCACTGCTGATCAGCTGCGTAGATATGTTGATGAGATGGTGTCGTTGGTG ACTCCTGATCAGGCTGATTTGTTGCGGGTGAATTCTGAGCGGGGCAATCTTCGCGTGGTGTATACCGCTCTGCATGGTGT GGGTGGCCGCGCGATGGCCAATGCTTTCCAATTTGCTGGTTTTCCCCATACTCATGGCGTGAAGGCTCAGCAGTATCCTG ATCCCACCTTCCCCACTGTGGCGTTCCCCAATCCGGAAGAGCCTTCTGCGATTGAGTTGTTGTTGGAACGCGCAAAGGAA AAGAACGCTGACATTTTGTTTGCGCTTGATCCTGATGCCGATCGTTGTGCTGTGGGTATTCGTACCGCTGATGGCGGCCA CCGAATGCTCTCTGGCGATGAGGTGGGCACACTTTTGGCTACTCGTTTGGTTCCGGAGTATTCCGGTGAAGGCCCACGTC CCGTGGTTGCCACCACGGTGGTTTCTTCGCAGCTTCTGGGTATCATCGCCGAGGATAAAGGGTGGGATTATTCCGAGACA CTGACGGGATTCAAAAACCTGTCGAGGGCTGCCGATGGTCTCGACGGACCGCTTGCTTTCGCTTATGAGGAAGCTGTGGG CACCTGCCCGGTTCCAGATGTCGTGCCGGATAAGGACGGCATCTCTACAGCGTTGTTCATGGCGTCGTGGGCTGCCGAAC TGAAGGCTCAGGGCGCAAGCCTGCAGCAAAAACTCAATGAGTTGTATCGCCGATATGGGTATTTTGCGTCCTCGCAAATT GCTGTGCGCACGAGCAGTCCACGCGAGTTAGTTGATCACTGGATTGCGCATCCTCAGCAAGAACTCATTGGAGTGTCTGC CACCCCACATATTCTTCCTGAAAAACAGGGCATTGCTTTGCATGGCGAGGTGGGGCATGTGCATATCCGCGCTATTGGTC GAGTCTCTGGCACTGAGGCAAAAGCCAAGCTCTATTTGGAAGTTGGTCAGGCCAGCTCCCATGATGAGGCGGCTCAGTTG CTTCATCAGTTAGAGGATGAAGTCCAAAGCTGGTTGAGCAAGCTTTAG
Upstream 100 bases:
>100_bases GCCAAATACTCAGTCGTGCGGTATTCCATGTGGGAGAGCTCAGGATGGCTGTGCAAATGCCTGCGCCACTTAATGACCTC GTCATGGTGGCGGTCCATCC
Downstream 100 bases:
>100_bases TTTCCTGGCTGCTCGCGGTTGCGGGTGAGCCGGAGGTCTGCGTCGAAAAGCAATGGATCTTTTTCTGAAGGCCACCGCAC GTCAATGGCGGCGGTTTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MRQPAHQFPSREIPFCFVRRRIRKTCSAVESSLIVIPRKQRIGVFMDESRQLSFGTAGLRAPVGPARHQMNVLQVTRTTA GVASWLAERAALNPVPHLVPEDETGIGRALYPQDGPLRVVVGYDARYGSHTFAATTAEVFAGAGFEVTLLPTPSPTPLIP WLVNKHGLDAGVQITASHNGAADNGYKVFLSNGRQLYSELEPELEAHINAVEDPIRVPRVTVRPTADQLRRYVDEMVSLV TPDQADLLRVNSERGNLRVVYTALHGVGGRAMANAFQFAGFPHTHGVKAQQYPDPTFPTVAFPNPEEPSAIELLLERAKE KNADILFALDPDADRCAVGIRTADGGHRMLSGDEVGTLLATRLVPEYSGEGPRPVVATTVVSSQLLGIIAEDKGWDYSET LTGFKNLSRAADGLDGPLAFAYEEAVGTCPVPDVVPDKDGISTALFMASWAAELKAQGASLQQKLNELYRRYGYFASSQI AVRTSSPRELVDHWIAHPQQELIGVSATPHILPEKQGIALHGEVGHVHIRAIGRVSGTEAKAKLYLEVGQASSHDEAAQL LHQLEDEVQSWLSKL
Sequences:
>Translated_575_residues MRQPAHQFPSREIPFCFVRRRIRKTCSAVESSLIVIPRKQRIGVFMDESRQLSFGTAGLRAPVGPARHQMNVLQVTRTTA GVASWLAERAALNPVPHLVPEDETGIGRALYPQDGPLRVVVGYDARYGSHTFAATTAEVFAGAGFEVTLLPTPSPTPLIP WLVNKHGLDAGVQITASHNGAADNGYKVFLSNGRQLYSELEPELEAHINAVEDPIRVPRVTVRPTADQLRRYVDEMVSLV TPDQADLLRVNSERGNLRVVYTALHGVGGRAMANAFQFAGFPHTHGVKAQQYPDPTFPTVAFPNPEEPSAIELLLERAKE KNADILFALDPDADRCAVGIRTADGGHRMLSGDEVGTLLATRLVPEYSGEGPRPVVATTVVSSQLLGIIAEDKGWDYSET LTGFKNLSRAADGLDGPLAFAYEEAVGTCPVPDVVPDKDGISTALFMASWAAELKAQGASLQQKLNELYRRYGYFASSQI AVRTSSPRELVDHWIAHPQQELIGVSATPHILPEKQGIALHGEVGHVHIRAIGRVSGTEAKAKLYLEVGQASSHDEAAQL LHQLEDEVQSWLSKL >Mature_575_residues MRQPAHQFPSREIPFCFVRRRIRKTCSAVESSLIVIPRKQRIGVFMDESRQLSFGTAGLRAPVGPARHQMNVLQVTRTTA GVASWLAERAALNPVPHLVPEDETGIGRALYPQDGPLRVVVGYDARYGSHTFAATTAEVFAGAGFEVTLLPTPSPTPLIP WLVNKHGLDAGVQITASHNGAADNGYKVFLSNGRQLYSELEPELEAHINAVEDPIRVPRVTVRPTADQLRRYVDEMVSLV TPDQADLLRVNSERGNLRVVYTALHGVGGRAMANAFQFAGFPHTHGVKAQQYPDPTFPTVAFPNPEEPSAIELLLERAKE KNADILFALDPDADRCAVGIRTADGGHRMLSGDEVGTLLATRLVPEYSGEGPRPVVATTVVSSQLLGIIAEDKGWDYSET LTGFKNLSRAADGLDGPLAFAYEEAVGTCPVPDVVPDKDGISTALFMASWAAELKAQGASLQQKLNELYRRYGYFASSQI AVRTSSPRELVDHWIAHPQQELIGVSATPHILPEKQGIALHGEVGHVHIRAIGRVSGTEAKAKLYLEVGQASSHDEAAQL LHQLEDEVQSWLSKL
Specific function: Involved In The Biosynthesis Of The Capsular Polysaccharide Colanic Acid. [C]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI31377548, Length=567, Percent_Identity=31.3932980599647, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI63055049, Length=449, Percent_Identity=33.630289532294, Blast_Score=207, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71993870, Length=439, Percent_Identity=33.4851936218679, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI71993878, Length=295, Percent_Identity=32.5423728813559, Blast_Score=137, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6323934, Length=584, Percent_Identity=29.2808219178082, Blast_Score=192, Evalue=2e-49, Organism=Drosophila melanogaster, GI24651977, Length=455, Percent_Identity=34.0659340659341, Blast_Score=223, Evalue=4e-58, Organism=Drosophila melanogaster, GI20129809, Length=455, Percent_Identity=34.0659340659341, Blast_Score=222, Evalue=6e-58, Organism=Drosophila melanogaster, GI24653722, Length=475, Percent_Identity=30.9473684210526, Blast_Score=189, Evalue=6e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 62554; Mature: 62554
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQPAHQFPSREIPFCFVRRRIRKTCSAVESSLIVIPRKQRIGVFMDESRQLSFGTAGLR CCCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCEEECCCCCCC APVGPARHQMNVLQVTRTTAGVASWLAERAALNPVPHLVPEDETGIGRALYPQDGPLRVV CCCCHHHHHCCHHEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCEEEE VGYDARYGSHTFAATTAEVFAGAGFEVTLLPTPSPTPLIPWLVNKHGLDAGVQITASHNG EECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCEEEEECCCC AADNGYKVFLSNGRQLYSELEPELEAHINAVEDPIRVPRVTVRPTADQLRRYVDEMVSLV CCCCCEEEEECCCHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHC TPDQADLLRVNSERGNLRVVYTALHGVGGRAMANAFQFAGFPHTHGVKAQQYPDPTFPTV CCCCHHEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE AFPNPEEPSAIELLLERAKEKNADILFALDPDADRCAVGIRTADGGHRMLSGDEVGTLLA ECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCEEECCCHHHHHHH TRLVPEYSGEGPRPVVATTVVSSQLLGIIAEDKGWDYSETLTGFKNLSRAADGLDGPLAF HHHCCCCCCCCCCCEEEHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHH AYEEAVGTCPVPDVVPDKDGISTALFMASWAAELKAQGASLQQKLNELYRRYGYFASSQI HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEE AVRTSSPRELVDHWIAHPQQELIGVSATPHILPEKQGIALHGEVGHVHIRAIGRVSGTEA EEECCCHHHHHHHHHCCCHHHHEECCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCC KAKLYLEVGQASSHDEAAQLLHQLEDEVQSWLSKL EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRQPAHQFPSREIPFCFVRRRIRKTCSAVESSLIVIPRKQRIGVFMDESRQLSFGTAGLR CCCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCEEECCCCCCC APVGPARHQMNVLQVTRTTAGVASWLAERAALNPVPHLVPEDETGIGRALYPQDGPLRVV CCCCHHHHHCCHHEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCEEEE VGYDARYGSHTFAATTAEVFAGAGFEVTLLPTPSPTPLIPWLVNKHGLDAGVQITASHNG EECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCCCCCCCEEEEECCCC AADNGYKVFLSNGRQLYSELEPELEAHINAVEDPIRVPRVTVRPTADQLRRYVDEMVSLV CCCCCEEEEECCCHHHHHHCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHC TPDQADLLRVNSERGNLRVVYTALHGVGGRAMANAFQFAGFPHTHGVKAQQYPDPTFPTV CCCCHHEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE AFPNPEEPSAIELLLERAKEKNADILFALDPDADRCAVGIRTADGGHRMLSGDEVGTLLA ECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCEEECCCHHHHHHH TRLVPEYSGEGPRPVVATTVVSSQLLGIIAEDKGWDYSETLTGFKNLSRAADGLDGPLAF HHHCCCCCCCCCCCEEEHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHH AYEEAVGTCPVPDVVPDKDGISTALFMASWAAELKAQGASLQQKLNELYRRYGYFASSQI HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEE AVRTSSPRELVDHWIAHPQQELIGVSATPHILPEKQGIALHGEVGHVHIRAIGRVSGTEA EEECCCHHHHHHHHHCCCHHHHEECCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCC KAKLYLEVGQASSHDEAAQLLHQLEDEVQSWLSKL EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]