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The map label for this gene is idsA [H]

Identifier: 145294798

GI number: 145294798

Start: 819266

End: 820414

Strand: Reverse

Name: idsA [H]

Synonym: cgR_0745

Alternate gene names: 145294798

Gene position: 820414-819266 (Counterclockwise)

Preceding gene: 145294801

Following gene: 145294797

Centisome position: 24.75

GC content: 45.87

Gene sequence:

>1149_bases
TTGCGACATAACTGGCCGTGCGATACTCGAATGGACAATGGCATGACAATCACCACAGAGCATTCAACTCATCCTGATCT
TGATTTCAATGATGAGATCTATCGGGAACTAAATCGCATCTGCGCTTCGCTATCTCAACAGTGCAGCACATATCCACCAG
AGTTCCGTACATGCCTAGATGCCGCTTTCCAAGCTTTGCGGGGTGGCAAGTTAATCCGTCCTCGGATGCTATTAGGGCTA
TACGACGCGCTTGTAGACGATGATATTGAGGTCAAACTCAACACCGTTTTACAGGTGGCAGCGGCTTTAGAACTACTACA
TTTTTCCCTTTTGGTTCATGACGATGTTATTGACGGAGACCTCTATCGCCGAGGCAAACTTAATTTTATTGGGCAGATTC
TCATTCATCGCACACCTGAAAGTTTTGCACAAACCCAGCGCGATCCAGAGCATCTAGATTGGGCACAATCTAATGGGCTA
CTTATGGGGAATCTTTTTCTTGCTGCCACCCATCAAATCTTCGCGCGCCTTGACCTTCCACACCCCCAACGGGTTCGGCT
GTTAGATTTACTCAACCACACGATGAATGACACCATTGTGGGTGAGTTTCTTGATGTGGGATTAAGCAGCAAAGCAATCA
GCCCGAATATGGATATTGCTCTAGAAATGAGTCGGCTAAAAACAGCCACATACAGTTTTGAACTTCCAATGAGAGCAGCG
GCAATTCTCGCGGAACTACCTCAGGAGATTGAAACACAGATAGGTGAGATAGGCACCAACTTGGGCATCGCTTACCAATT
ACAGGATGATTACTTATCTACTTTTGGTGACGCAGCCGAACACGGCAAAGATGCCTTTTCTGACCTTCGAGAAGGAAAAG
AAACGACAATCATCGCCTATGCTCGAAATACTGCTAAATGGAATGATATTGAAGACATCTTCGGTTCCGCAGATCTGAGC
ACCTCTCAGGCAGAGCGAATTCAACATCTTCTCATACAGTGTGGAGCAAAGAATCACTCCTTAAATGCCATCTCCGATCA
CTTAAATATCTGCCGTTCGATGATCGAAACACTAAGCACCCAGGTATATCCCAAGGCTCAAAAGTTATTACTCAAACACG
TTGAGCAACTAGCCAGCCGCAAATCTTAG

Upstream 100 bases:

>100_bases
ATAGTATAAATTTCCTGTAGGGACCTTAATTTTTATGAACCCGATTTCACACCTTCTGTACTCTTTAAAATAAAGCGCCT
TATAGAACGATTGGGAATTT

Downstream 100 bases:

>100_bases
AACTAGCTTTTACGCCTTTAACGGAAGTGAATTTGATGTCTACTAGCATCACAACAGAGCGCAGGAAGAAATCTGGTTCT
ACTCGCTTGATGAGAATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; Farnesyl diphosphate synthase; Farnesyl pyrophosphate synthase; FPP synthase; Geranyltranstransferase [H]

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MRHNWPCDTRMDNGMTITTEHSTHPDLDFNDEIYRELNRICASLSQQCSTYPPEFRTCLDAAFQALRGGKLIRPRMLLGL
YDALVDDDIEVKLNTVLQVAAALELLHFSLLVHDDVIDGDLYRRGKLNFIGQILIHRTPESFAQTQRDPEHLDWAQSNGL
LMGNLFLAATHQIFARLDLPHPQRVRLLDLLNHTMNDTIVGEFLDVGLSSKAISPNMDIALEMSRLKTATYSFELPMRAA
AILAELPQEIETQIGEIGTNLGIAYQLQDDYLSTFGDAAEHGKDAFSDLREGKETTIIAYARNTAKWNDIEDIFGSADLS
TSQAERIQHLLIQCGAKNHSLNAISDHLNICRSMIETLSTQVYPKAQKLLLKHVEQLASRKS

Sequences:

>Translated_382_residues
MRHNWPCDTRMDNGMTITTEHSTHPDLDFNDEIYRELNRICASLSQQCSTYPPEFRTCLDAAFQALRGGKLIRPRMLLGL
YDALVDDDIEVKLNTVLQVAAALELLHFSLLVHDDVIDGDLYRRGKLNFIGQILIHRTPESFAQTQRDPEHLDWAQSNGL
LMGNLFLAATHQIFARLDLPHPQRVRLLDLLNHTMNDTIVGEFLDVGLSSKAISPNMDIALEMSRLKTATYSFELPMRAA
AILAELPQEIETQIGEIGTNLGIAYQLQDDYLSTFGDAAEHGKDAFSDLREGKETTIIAYARNTAKWNDIEDIFGSADLS
TSQAERIQHLLIQCGAKNHSLNAISDHLNICRSMIETLSTQVYPKAQKLLLKHVEQLASRKS
>Mature_382_residues
MRHNWPCDTRMDNGMTITTEHSTHPDLDFNDEIYRELNRICASLSQQCSTYPPEFRTCLDAAFQALRGGKLIRPRMLLGL
YDALVDDDIEVKLNTVLQVAAALELLHFSLLVHDDVIDGDLYRRGKLNFIGQILIHRTPESFAQTQRDPEHLDWAQSNGL
LMGNLFLAATHQIFARLDLPHPQRVRLLDLLNHTMNDTIVGEFLDVGLSSKAISPNMDIALEMSRLKTATYSFELPMRAA
AILAELPQEIETQIGEIGTNLGIAYQLQDDYLSTFGDAAEHGKDAFSDLREGKETTIIAYARNTAKWNDIEDIFGSADLS
TSQAERIQHLLIQCGAKNHSLNAISDHLNICRSMIETLSTQVYPKAQKLLLKHVEQLASRKS

Specific function: Supplies Octaprenyl Diphosphate, The Precursor For The Side Chain Of The Isoprenoid Quinones Ubiquinone And Menaquinone. [C]

COG id: COG0142

COG function: function code H; Geranylgeranyl pyrophosphate synthase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FPP/GGPP synthase family [H]

Homologues:

Organism=Homo sapiens, GI50659086, Length=204, Percent_Identity=28.4313725490196, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1789578, Length=288, Percent_Identity=24.3055555555556, Blast_Score=65, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17505681, Length=201, Percent_Identity=30.3482587064677, Blast_Score=78, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000092
- InterPro:   IPR017446
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00348 polyprenyl_synt [H]

EC number: =2.5.1.1; =2.5.1.10 [H]

Molecular weight: Translated: 42996; Mature: 42996

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00723 POLYPRENYL_SYNTHET_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHNWPCDTRMDNGMTITTEHSTHPDLDFNDEIYRELNRICASLSQQCSTYPPEFRTCLD
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AAFQALRGGKLIRPRMLLGLYDALVDDDIEVKLNTVLQVAAALELLHFSLLVHDDVIDGD
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LYRRGKLNFIGQILIHRTPESFAQTQRDPEHLDWAQSNGLLMGNLFLAATHQIFARLDLP
HHCCCCHHHHHHHHHHCCCHHHHHCCCCHHHCCHHHCCCEEEEHHHHHHHHHHHHHCCCC
HPQRVRLLDLLNHTMNDTIVGEFLDVGLSSKAISPNMDIALEMSRLKTATYSFELPMRAA
CCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHEEECCHHHHH
AILAELPQEIETQIGEIGTNLGIAYQLQDDYLSTFGDAAEHGKDAFSDLREGKETTIIAY
HHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
ARNTAKWNDIEDIFGSADLSTSQAERIQHLLIQCGAKNHSLNAISDHLNICRSMIETLST
ECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
QVYPKAQKLLLKHVEQLASRKS
HCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRHNWPCDTRMDNGMTITTEHSTHPDLDFNDEIYRELNRICASLSQQCSTYPPEFRTCLD
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AAFQALRGGKLIRPRMLLGLYDALVDDDIEVKLNTVLQVAAALELLHFSLLVHDDVIDGD
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LYRRGKLNFIGQILIHRTPESFAQTQRDPEHLDWAQSNGLLMGNLFLAATHQIFARLDLP
HHCCCCHHHHHHHHHHCCCHHHHHCCCCHHHCCHHHCCCEEEEHHHHHHHHHHHHHCCCC
HPQRVRLLDLLNHTMNDTIVGEFLDVGLSSKAISPNMDIALEMSRLKTATYSFELPMRAA
CCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHEEECCHHHHH
AILAELPQEIETQIGEIGTNLGIAYQLQDDYLSTFGDAAEHGKDAFSDLREGKETTIIAY
HHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
ARNTAKWNDIEDIFGSADLSTSQAERIQHLLIQCGAKNHSLNAISDHLNICRSMIETLST
ECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
QVYPKAQKLLLKHVEQLASRKS
HCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]